Guide to the Human Genome
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Name: SPRED1 Sequence: fasta or formatted (444aa) NCBI GI: 22749221
Description:

sprouty-related protein 1 with EVH-1 domain

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         22           2
 C cysteine            5.2         23           2
 D aspartate           9.0         40           2
 E glutamate           6.5         29           2
 F phenylalanine       3.8         17           2
 G glycine             5.2         23           2
 H histidine           2.3         10           2
 I isoleucine          4.5         20           1
 K lysine              6.8         30           2
 L leucine             6.1         27           1
 M methionine          2.7         12           1
 N asparagine          3.2         14           1
 P proline             4.5         20           1
 Q glutamine           4.5         20           2
 R arginine            7.7         34           2
 S serine             10.8         48           4
 T threonine           2.9         13           1
 V valine              5.6         25           2
 W tryptophan          0.9          4           1
 Y tyrosine            2.9         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sprouty-related protein 1 with EVH-1 domain 
SPRED2                0.448   sprouty-related protein with EVH-1 domain 2 isoform...
SPRED2                0.445   sprouty-related protein with EVH-1 domain 2 isoform...
SPRED3                0.132   sprouty-related, EVH1 domain containing 3 isoform a...
SPRED3                0.116   sprouty-related, EVH1 domain containing 3 isoform b ...
ENAH                  0.056   enabled homolog isoform a 
ENAH                  0.056   enabled homolog isoform b 
EVL                   0.049   Enah/Vasp-like 
SPRY3                 0.049   sprouty homolog 3 
VASP                  0.045   vasodilator-stimulated phosphoprotein 
SPRY1                 0.043   sprouty homolog 1, antagonist of FGF signaling [Homo...
SPRY1                 0.043   sprouty homolog 1, antagonist of FGF signaling [Homo...
SPRY2                 0.042   sprouty 2 
SPRY4                 0.036   sprouty homolog 4 isoform 2 
SPRY4                 0.036   sprouty homolog 4 isoform 1 
WAS                   0.014   Wiskott-Aldrich syndrome protein 
KRTAP5-5              0.009   keratin associated protein 5-5 
THRAP3                0.009   thyroid hormone receptor associated protein 3 [Homo...
TCHH                  0.008   trichohyalin 
KRTAP5-9              0.008   keratin associated protein 5-9 
CNGB3                 0.008   cyclic nucleotide gated channel beta 3 
BOD1L                 0.008   biorientation of chromosomes in cell division 1-like...
LAMC3                 0.008   laminin, gamma 3 precursor 
KRTAP5-1              0.008   keratin associated protein 5-1 
DSP                   0.007   desmoplakin isoform I 
PCLO                  0.007   piccolo isoform 2 
PCLO                  0.007   piccolo isoform 1 
PLXNB3                0.006   plexin B3 isoform 2 
PLXNB3                0.006   plexin B3 isoform 1 
MT4                   0.006   metallothionein 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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