| Name: C1orf216 | Sequence: fasta or formatted (229aa) | NCBI GI: 22748805 | |
|
Description: hypothetical protein LOC127703
| Not currently referenced in the text | ||
|
Composition:
Amino acid Percentage Count Longest homopolymer A alanine 8.3 19 2 C cysteine 1.7 4 1 D aspartate 4.8 11 1 E glutamate 8.3 19 2 F phenylalanine 2.2 5 1 G glycine 8.3 19 2 H histidine 2.6 6 2 I isoleucine 3.5 8 1 K lysine 2.6 6 1 L leucine 8.7 20 2 M methionine 2.2 5 1 N asparagine 3.1 7 1 P proline 11.4 26 3 Q glutamine 9.2 21 2 R arginine 6.6 15 2 S serine 9.6 22 3 T threonine 1.3 3 1 V valine 3.5 8 1 W tryptophan 0.9 2 1 Y tyrosine 1.3 3 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 hypothetical protein LOC127703 SSBP4 0.043 single stranded DNA binding protein 4 isoform b [Hom... SSBP4 0.043 single stranded DNA binding protein 4 isoform a [Hom... SSBP2 0.038 single-stranded DNA binding protein 2 WIPF2 0.036 WIRE protein KIAA0467 0.036 hypothetical protein LOC23334 SSBP3 0.034 single stranded DNA binding protein 3 isoform c [Hom... AGFG2 0.029 ArfGAP with FG repeats 2 C6orf132 0.027 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.027 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.027 PREDICTED: hypothetical protein LOC647024 COL17A1 0.027 alpha 1 type XVII collagen BSN 0.027 bassoon protein SMARCD3 0.027 SWI/SNF related, matrix associated, actin dependent ... SMARCD3 0.027 SWI/SNF related, matrix associated, actin dependent ... CEP110 0.027 centrosomal protein 110kDa LOC389333 0.027 hypothetical protein LOC389333 MED12 0.027 mediator complex subunit 12 MED15 0.027 mediator complex subunit 15 isoform a MED15 0.027 mediator complex subunit 15 isoform b BCL9 0.025 B-cell CLL/lymphoma 9 TMCC1 0.025 transmembrane and coiled-coil domain family 1 isofo... LMTK3 0.025 lemur tyrosine kinase 3 TAF4 0.022 TBP-associated factor 4 BAT2 0.022 HLA-B associated transcript-2 SMARCD3 0.022 SWI/SNF related, matrix associated, actin dependent ... SSBP3 0.022 single stranded DNA binding protein 3 isoform a [Hom... PRB4 0.022 proline-rich protein BstNI subfamily 4 precursor [Ho... ZFHX4 0.022 zinc finger homeodomain 4 INCENP 0.022 inner centromere protein antigens 135/155kDa isofor...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
