TMCC1 10506

Name: TMCC1	Sequence: fasta or formatted (653aa)		NCBI GI: 190014610
Description: transmembrane and coiled-coil domain family 1 isoform a		Referenced in: Coiled-Coil Proteins
Other entries for this name: alt prot [539aa] transmembrane and coiled-coil domain family 1 isoform c alt prot [329aa] transmembrane and coiled-coil domain family 1 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.5 62 8 C cysteine 1.1 7 1 D aspartate 4.6 30 2 E glutamate 8.4 55 2 F phenylalanine 2.9 19 2 G glycine 5.5 36 2 H histidine 2.5 16 1 I isoleucine 4.7 31 1 K lysine 6.1 40 2 L leucine 8.6 56 2 M methionine 2.3 15 2 N asparagine 3.7 24 1 P proline 3.8 25 2 Q glutamine 8.3 54 6 R arginine 5.7 37 3 S serine 9.6 63 3 T threonine 5.4 35 2 V valine 5.7 37 2 W tryptophan 0.3 2 1 Y tyrosine 1.4 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane and coiled-coil domain family 1 isofo... TMCC1 0.816 transmembrane and coiled-coil domain family 1 isofo... TMCC1 0.492 transmembrane and coiled-coil domain family 1 isofor... TMCC2 0.487 transmembrane and coiled-coil domain family 2 TMCC3 0.323 transmembrane and coiled-coil domain family 3 [Homo... TEX28 0.088 testis expressed 28 PLEC1 0.023 plectin 1 isoform 11 PLEC1 0.023 plectin 1 isoform 10 PLEC1 0.023 plectin 1 isoform 8 PLEC1 0.023 plectin 1 isoform 7 PLEC1 0.023 plectin 1 isoform 6 PLEC1 0.023 plectin 1 isoform 3 PLEC1 0.023 plectin 1 isoform 2 PLEC1 0.023 plectin 1 isoform 1 GOLGA4 0.018 golgi autoantigen, golgin subfamily a, 4 MYH3 0.017 myosin, heavy chain 3, skeletal muscle, embryonic [H... MYO18A 0.017 myosin 18A isoform b MYO18A 0.017 myosin 18A isoform a GOLGA2 0.017 Golgi autoantigen, golgin subfamily a, 2 LRSAM1 0.017 leucine rich repeat and sterile alpha motif containi... LRSAM1 0.017 leucine rich repeat and sterile alpha motif containi... LRSAM1 0.017 leucine rich repeat and sterile alpha motif containi... CCDC30 0.016 coiled-coil domain containing 30 MYH4 0.016 myosin, heavy polypeptide 4, skeletal muscle MYH9 0.015 myosin, heavy polypeptide 9, non-muscle NUMA1 0.015 nuclear mitotic apparatus protein 1 MYH2 0.015 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.015 myosin, heavy chain 2, skeletal muscle, adult [Homo... SYCE1 0.015 synaptonemal complex central element protein 1 isof... SYCE1 0.015 synaptonemal complex central element protein 1 isof... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.