Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 226371746

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|226371746 peptide transporter 2 isoform a [Homo sapiens]
         (729 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|226371746 peptide transporter 2 isoform a [Homo sapiens]          1465   0.0  
gi|226371748 peptide transporter 2 isoform b [Homo sapiens]          1390   0.0  
gi|4827008 solute carrier family 15 (oligopeptide transporter), ...   636   0.0  
gi|21717816 solute carrier family 15, member 4 [Homo sapiens]         115   1e-25
gi|7706117 solute carrier family 15, member 3 [Homo sapiens]          101   3e-21
gi|91208420 bassoon protein [Homo sapiens]                             33   1.2  
gi|215490098 spinster homolog 1 isoform 4 [Homo sapiens]               32   1.6  
gi|21362092 1-acylglycerol-3-phosphate O-acyltransferase 9 [Homo...    32   2.1  
gi|21735483 transient receptor potential cation channel, subfami...    32   2.1  
gi|116063558 tet oncogene family member 2 isoform b [Homo sapiens]     32   2.7  
gi|187761317 tet oncogene family member 2 isoform a [Homo sapiens]     32   2.7  
gi|14150076 Yip1 domain family, member 4 [Homo sapiens]                32   2.7  
gi|126090663 zinc finger homeodomain 4 [Homo sapiens]                  31   3.6  
gi|31543806 thrombospondin 4 precursor [Homo sapiens]                  31   4.7  
gi|215490102 spinster homolog 1 isoform 3 [Homo sapiens]               31   4.7  
gi|215490100 spinster homolog 1 isoform 2 [Homo sapiens]               31   4.7  
gi|215490096 spinster homolog 1 isoform 1 [Homo sapiens]               31   4.7  
gi|14042968 spinster homolog 1 isoform 1 [Homo sapiens]                31   4.7  
gi|21361891 SH2 domain containing 4A [Homo sapiens]                    31   4.7  
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]    31   4.7  
gi|46409292 dpy-19-like 3 [Homo sapiens]                               30   6.1  
gi|55770852 glutamate receptor, ionotropic, delta 1 precursor [H...    30   6.1  

>gi|226371746 peptide transporter 2 isoform a [Homo sapiens]
          Length = 729

 Score = 1465 bits (3792), Expect = 0.0
 Identities = 729/729 (100%), Positives = 729/729 (100%)

Query: 1   MNPFQKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNEFCERFSY 60
           MNPFQKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNEFCERFSY
Sbjct: 1   MNPFQKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNEFCERFSY 60

Query: 61  YGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKTIIYLSLV 120
           YGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKTIIYLSLV
Sbjct: 61  YGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKTIIYLSLV 120

Query: 121 YVLGHVIKSLGALPILGGQVVHTVLSLIGLSLIALGTGGIKPCVAAFGGDQFEEKHAEER 180
           YVLGHVIKSLGALPILGGQVVHTVLSLIGLSLIALGTGGIKPCVAAFGGDQFEEKHAEER
Sbjct: 121 YVLGHVIKSLGALPILGGQVVHTVLSLIGLSLIALGTGGIKPCVAAFGGDQFEEKHAEER 180

Query: 181 TRYFSVFYLSINAGSLISTFITPMLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSK 240
           TRYFSVFYLSINAGSLISTFITPMLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSK
Sbjct: 181 TRYFSVFYLSINAGSLISTFITPMLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSK 240

Query: 241 IYNKPPPEGNIVAQVFKCIWFAISNRFKNRSGDIPKRQHWLDWAAEKYPKQLIMDVKALT 300
           IYNKPPPEGNIVAQVFKCIWFAISNRFKNRSGDIPKRQHWLDWAAEKYPKQLIMDVKALT
Sbjct: 241 IYNKPPPEGNIVAQVFKCIWFAISNRFKNRSGDIPKRQHWLDWAAEKYPKQLIMDVKALT 300

Query: 301 RVLFLYIPLPMFWALLDQQGSRWTLQAIRMNRNLGFFVLQPDQMQVLNPLLVLIFIPLFD 360
           RVLFLYIPLPMFWALLDQQGSRWTLQAIRMNRNLGFFVLQPDQMQVLNPLLVLIFIPLFD
Sbjct: 301 RVLFLYIPLPMFWALLDQQGSRWTLQAIRMNRNLGFFVLQPDQMQVLNPLLVLIFIPLFD 360

Query: 361 FVIYRLVSKCGINFSSLRKMAVGMILACLAFAVAAAVEIKINEMAPAQPGPQEVFLQVLN 420
           FVIYRLVSKCGINFSSLRKMAVGMILACLAFAVAAAVEIKINEMAPAQPGPQEVFLQVLN
Sbjct: 361 FVIYRLVSKCGINFSSLRKMAVGMILACLAFAVAAAVEIKINEMAPAQPGPQEVFLQVLN 420

Query: 421 LADDEVKVTVVGNENNSLLIESIKSFQKTPHYSKLHLKTKSQDFHFHLKYHNLSLYTEHS 480
           LADDEVKVTVVGNENNSLLIESIKSFQKTPHYSKLHLKTKSQDFHFHLKYHNLSLYTEHS
Sbjct: 421 LADDEVKVTVVGNENNSLLIESIKSFQKTPHYSKLHLKTKSQDFHFHLKYHNLSLYTEHS 480

Query: 481 VQEKNWYSLVIREDGNSISSMMVKDTESRTTNGMTTVRFVNTLHKDVNISLSTDTSLNVG 540
           VQEKNWYSLVIREDGNSISSMMVKDTESRTTNGMTTVRFVNTLHKDVNISLSTDTSLNVG
Sbjct: 481 VQEKNWYSLVIREDGNSISSMMVKDTESRTTNGMTTVRFVNTLHKDVNISLSTDTSLNVG 540

Query: 541 EDYGVSAYRTVQRGEYPAVHCRTEDKNFSLNLGLLDFGAAYLFVITNNTNQGLQAWKIED 600
           EDYGVSAYRTVQRGEYPAVHCRTEDKNFSLNLGLLDFGAAYLFVITNNTNQGLQAWKIED
Sbjct: 541 EDYGVSAYRTVQRGEYPAVHCRTEDKNFSLNLGLLDFGAAYLFVITNNTNQGLQAWKIED 600

Query: 601 IPANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNIIV 660
           IPANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNIIV
Sbjct: 601 IPANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNIIV 660

Query: 661 LVVAQFSGLVQWAEFILFSCLLLVICLIFSIMGYYYVPVKTEDMRGPADKHIPHIQGNMI 720
           LVVAQFSGLVQWAEFILFSCLLLVICLIFSIMGYYYVPVKTEDMRGPADKHIPHIQGNMI
Sbjct: 661 LVVAQFSGLVQWAEFILFSCLLLVICLIFSIMGYYYVPVKTEDMRGPADKHIPHIQGNMI 720

Query: 721 KLETKKTKL 729
           KLETKKTKL
Sbjct: 721 KLETKKTKL 729


>gi|226371748 peptide transporter 2 isoform b [Homo sapiens]
          Length = 698

 Score = 1390 bits (3597), Expect = 0.0
 Identities = 698/729 (95%), Positives = 698/729 (95%), Gaps = 31/729 (4%)

Query: 1   MNPFQKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNEFCERFSY 60
           MNPFQKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNEFCERFSY
Sbjct: 1   MNPFQKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNEFCERFSY 60

Query: 61  YGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKTIIYLSLV 120
           YGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFK        
Sbjct: 61  YGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFK-------- 112

Query: 121 YVLGHVIKSLGALPILGGQVVHTVLSLIGLSLIALGTGGIKPCVAAFGGDQFEEKHAEER 180
                                  VLSLIGLSLIALGTGGIKPCVAAFGGDQFEEKHAEER
Sbjct: 113 -----------------------VLSLIGLSLIALGTGGIKPCVAAFGGDQFEEKHAEER 149

Query: 181 TRYFSVFYLSINAGSLISTFITPMLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSK 240
           TRYFSVFYLSINAGSLISTFITPMLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSK
Sbjct: 150 TRYFSVFYLSINAGSLISTFITPMLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSK 209

Query: 241 IYNKPPPEGNIVAQVFKCIWFAISNRFKNRSGDIPKRQHWLDWAAEKYPKQLIMDVKALT 300
           IYNKPPPEGNIVAQVFKCIWFAISNRFKNRSGDIPKRQHWLDWAAEKYPKQLIMDVKALT
Sbjct: 210 IYNKPPPEGNIVAQVFKCIWFAISNRFKNRSGDIPKRQHWLDWAAEKYPKQLIMDVKALT 269

Query: 301 RVLFLYIPLPMFWALLDQQGSRWTLQAIRMNRNLGFFVLQPDQMQVLNPLLVLIFIPLFD 360
           RVLFLYIPLPMFWALLDQQGSRWTLQAIRMNRNLGFFVLQPDQMQVLNPLLVLIFIPLFD
Sbjct: 270 RVLFLYIPLPMFWALLDQQGSRWTLQAIRMNRNLGFFVLQPDQMQVLNPLLVLIFIPLFD 329

Query: 361 FVIYRLVSKCGINFSSLRKMAVGMILACLAFAVAAAVEIKINEMAPAQPGPQEVFLQVLN 420
           FVIYRLVSKCGINFSSLRKMAVGMILACLAFAVAAAVEIKINEMAPAQPGPQEVFLQVLN
Sbjct: 330 FVIYRLVSKCGINFSSLRKMAVGMILACLAFAVAAAVEIKINEMAPAQPGPQEVFLQVLN 389

Query: 421 LADDEVKVTVVGNENNSLLIESIKSFQKTPHYSKLHLKTKSQDFHFHLKYHNLSLYTEHS 480
           LADDEVKVTVVGNENNSLLIESIKSFQKTPHYSKLHLKTKSQDFHFHLKYHNLSLYTEHS
Sbjct: 390 LADDEVKVTVVGNENNSLLIESIKSFQKTPHYSKLHLKTKSQDFHFHLKYHNLSLYTEHS 449

Query: 481 VQEKNWYSLVIREDGNSISSMMVKDTESRTTNGMTTVRFVNTLHKDVNISLSTDTSLNVG 540
           VQEKNWYSLVIREDGNSISSMMVKDTESRTTNGMTTVRFVNTLHKDVNISLSTDTSLNVG
Sbjct: 450 VQEKNWYSLVIREDGNSISSMMVKDTESRTTNGMTTVRFVNTLHKDVNISLSTDTSLNVG 509

Query: 541 EDYGVSAYRTVQRGEYPAVHCRTEDKNFSLNLGLLDFGAAYLFVITNNTNQGLQAWKIED 600
           EDYGVSAYRTVQRGEYPAVHCRTEDKNFSLNLGLLDFGAAYLFVITNNTNQGLQAWKIED
Sbjct: 510 EDYGVSAYRTVQRGEYPAVHCRTEDKNFSLNLGLLDFGAAYLFVITNNTNQGLQAWKIED 569

Query: 601 IPANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNIIV 660
           IPANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNIIV
Sbjct: 570 IPANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNIIV 629

Query: 661 LVVAQFSGLVQWAEFILFSCLLLVICLIFSIMGYYYVPVKTEDMRGPADKHIPHIQGNMI 720
           LVVAQFSGLVQWAEFILFSCLLLVICLIFSIMGYYYVPVKTEDMRGPADKHIPHIQGNMI
Sbjct: 630 LVVAQFSGLVQWAEFILFSCLLLVICLIFSIMGYYYVPVKTEDMRGPADKHIPHIQGNMI 689

Query: 721 KLETKKTKL 729
           KLETKKTKL
Sbjct: 690 KLETKKTKL 698


>gi|4827008 solute carrier family 15 (oligopeptide transporter),
           member 1 [Homo sapiens]
          Length = 708

 Score =  636 bits (1640), Expect = 0.0
 Identities = 346/698 (49%), Positives = 461/698 (66%), Gaps = 54/698 (7%)

Query: 42  YPLSIAFIVVNEFCERFSYYGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGA 101
           YPLSI FIVVNEFCERFSYYGM+A+LILYF  F+ W+++ ST+IYH F +LCY TPILGA
Sbjct: 12  YPLSIFFIVVNEFCERFSYYGMRAILILYFTNFISWDDNLSTAIYHTFVALCYLTPILGA 71

Query: 102 AIADSWLGKFKTIIYLSLVYVLGHVIKSLGALPILGGQ---------VVHTVLSLIGLSL 152
            IADSWLGKFKTI+ LS+VY +G  + S+ ++  L             VH VLSLIGL+L
Sbjct: 72  LIADSWLGKFKTIVSLSIVYTIGQAVTSVSSINDLTDHNHDGTPDSLPVHVVLSLIGLAL 131

Query: 153 IALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITPMLRGDVQCF 212
           IALGTGGIKPCV+AFGGDQFEE   ++R R+FS+FYL+INAGSL+ST ITPMLR  VQ  
Sbjct: 132 IALGTGGIKPCVSAFGGDQFEEGQEKQRNRFFSIFYLAINAGSLLSTIITPMLR--VQQC 189

Query: 213 G----EDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKCIWFAISNRFK 268
           G    + CY LAFGVP  LM +AL+VF +GS +Y K  P+GNI+ +V KCI FAI NRF+
Sbjct: 190 GIHSKQACYPLAFGVPAALMAVALIVFVLGSGMYKKFKPQGNIMGKVAKCIGFAIKNRFR 249

Query: 269 NRSGDIPKRQHWLDWAAEKYPKQLIMDVKALTRVLFLYIPLPMFWALLDQQGSRWTLQAI 328
           +RS   PKR+HWLDWA EKY ++LI  +K +TRV+FLYIPLPMFWAL DQQGSRWTLQA 
Sbjct: 250 HRSKAFPKREHWLDWAKEKYDERLISQIKMVTRVMFLYIPLPMFWALFDQQGSRWTLQAT 309

Query: 329 RMNRNLGFFVLQPDQMQVLNPLLVLIFIPLFDFVIYRLVSKCGINFSSLRKMAVGMILAC 388
            M+  +G   +QPDQMQ +N +L++I +P+FD V+Y L++KCG NF+SL+KMAVGM+LA 
Sbjct: 310 TMSGKIGALEIQPDQMQTVNAILIVIMVPIFDAVLYPLIAKCGFNFTSLKKMAVGMVLAS 369

Query: 389 LAFAVAAAVEIKINEMAPAQPGPQEVFLQVLNLADDEVKVTVVG--------NENNSLLI 440
           +AF VAA V+++I++  P  P   EV ++VLN+ ++ + +++ G        ++ N+ + 
Sbjct: 370 MAFVVAAIVQVEIDKTLPVFPKGNEVQIKVLNIGNNTMNISLPGEMVTLGPMSQTNAFMT 429

Query: 441 ESIKSFQKTPHYSKLHLKTKSQDFHFHLKYHNLSLYTEHSVQEKNWYSLVIREDGNSISS 500
             +    +    S     T   D     + H L ++        N Y +V  +DG     
Sbjct: 430 FDVNKLTRINISSPGSPVTAVTDDFKQGQRHTLLVWA------PNHYQVV--KDG----- 476

Query: 501 MMVKDTESRTTNGMTTVRFVNTLHKDVNISLSTDTSLNVGEDYGVSAYRTVQRGEYPAVH 560
                   +   G   +RFVNT ++ + I++S     N+   Y  S Y+    G      
Sbjct: 477 -----LNQKPEKGENGIRFVNTFNELITITMSGKVYANI-SSYNASTYQFFPSGIKGFTI 530

Query: 561 CRTE-----DKNFSLNLGLLDFGAAYLFVITNNTNQGLQAWKIEDIPANKMSIAWQLPQY 615
             TE       NF  N   L+FG+AY +++    +   +    EDI AN +++A Q+PQY
Sbjct: 531 SSTEIPPQCQPNF--NTFYLEFGSAYTYIVQRKNDSCPEVKVFEDISANTVNMALQIPQY 588

Query: 616 ALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNIIVLVVA---QFSGLVQW 672
            L+T GEV+FSVTGLEFSYSQAPS+MKSVLQA WLLT+AVGNIIVL+VA   QFS   QW
Sbjct: 589 FLLTCGEVVFSVTGLEFSYSQAPSNMKSVLQAGWLLTVAVGNIIVLIVAGAGQFS--KQW 646

Query: 673 AEFILFSCLLLVICLIFSIMGYYYVPVKTEDMRGPADK 710
           AE+ILF+ LLLV+C+IF+IM  +Y  +   ++    D+
Sbjct: 647 AEYILFAALLLVVCVIFAIMARFYTYINPAEIEAQFDE 684


>gi|21717816 solute carrier family 15, member 4 [Homo sapiens]
          Length = 577

 Score =  115 bits (288), Expect = 1e-25
 Identities = 95/407 (23%), Positives = 179/407 (43%), Gaps = 71/407 (17%)

Query: 49  IVVNEFCERFSYYGMKAVLILYFLYF-LHWNEDTSTSIYHAFSSLCYFTPILGAAIADSW 107
           +++ E  ER ++YG+ + L+L+       W    ++     F  L Y     G  +AD+ 
Sbjct: 40  VLLTELLERAAFYGITSNLVLFLNGAPFCWEGAQASEALLLFMGLTYLGSPFGGWLADAR 99

Query: 108 LGKFKTIIYLSLVYVLGHVIKSLGALPILGGQVVHTVL---------------------- 145
           LG+ + I+    +Y+LG +     A P+L        L                      
Sbjct: 100 LGRARAILLSLALYLLGML-----AFPLLAAPATRAALCGSARLLNCTAPGPDAAARCCS 154

Query: 146 --SLIGLSLIALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITP 203
             +  GL L+ LG   +K  +  FG DQ +++  E   R+F+ FY SIN G+++S     
Sbjct: 155 PATFAGLVLVGLGVATVKANITPFGADQVKDRGPEATRRFFNWFYWSINLGAILSLGGIA 214

Query: 204 MLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKCIWFAI 263
            ++ +V       +   + +P + + +A VVF  G  ++   PP+G+    +FK + ++ 
Sbjct: 215 YIQQNVS------FVTGYAIPTVCVGLAFVVFLCGQSVFITKPPDGSAFTDMFKILTYSC 268

Query: 264 SNRFKNRSG---------------------DIPKRQHWLDWAAEKYPKQLIMDVKALTRV 302
            +  + RSG                     D  K  H   +  EK     + DVKAL ++
Sbjct: 269 CS--QKRSGERQSNGEGIGVFQQSSKQSLFDSCKMSHGGPFTEEK-----VEDVKALVKI 321

Query: 303 LFLYIPLPMFWALLDQQGSRWTLQAIRM------NRNLGFFVLQPDQMQVLNPLLVLIFI 356
           + +++ L  +W +  Q  + + LQ++ +      N       L    + + + +L+L+ I
Sbjct: 322 VPVFLALIPYWTVYFQMQTTYVLQSLHLRIPEISNITTTPHTLPAAWLTMFDAVLILLLI 381

Query: 357 PLFDFVIYRLVSKCGINFSSLRKMAVGM-ILACLAFAVAAAVEIKIN 402
           PL D ++  ++ + G+  SSL+++AVGM  + C AFA       ++N
Sbjct: 382 PLKDKLVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLN 428



 Score = 53.5 bits (127), Expect = 7e-07
 Identities = 23/57 (40%), Positives = 35/57 (61%)

Query: 603 ANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNII 659
           A  +S+ WQ+PQY L+   E+  S+ GLEF+YS AP SM+S +   +     VG+ +
Sbjct: 446 AADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFV 502


>gi|7706117 solute carrier family 15, member 3 [Homo sapiens]
          Length = 581

 Score =  101 bits (251), Expect = 3e-21
 Identities = 94/439 (21%), Positives = 187/439 (42%), Gaps = 74/439 (16%)

Query: 27  PSPPKKPSPTICGSNYPL--------------SIAFIVVNEFCERFSYYGMKAVLILYFL 72
           P+P  +  P + G   PL              + A +++ E  ER +++G+ A L+LY  
Sbjct: 2   PAPRAREQPRVPGERQPLLPRGARGPRRWRRAAGAAVLLVEMLERAAFFGVTANLVLYLN 61

Query: 73  YF-LHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKTIIYLSLVYVLGHVIKSLG 131
               +W  + +T     F    Y    +G  +AD +LG+++ +    L+Y+    +    
Sbjct: 62  STNFNWTGEQATRAALVFLGASYLLAPVGGWLADVYLGRYRAVALSLLLYLAASGLLPAT 121

Query: 132 ALP----ILGGQVVHTVLS---------------------LIGLSLIALGTGGIKPCVAA 166
           A P       G++  + L                        GL L+ L    ++  + +
Sbjct: 122 AFPDGRSSFCGEMPASPLGPACPSAGCPRSSPSPYCAPVLYAGLLLLGLAASSVRSNLTS 181

Query: 167 FGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITPMLRGDVQCFGEDCYALAFGVPGL 226
           FG DQ  +   +   R+F+ FY SIN G+++S  +   ++ ++       + L + +P  
Sbjct: 182 FGADQVMDLGRDATRRFFNWFYWSINLGAVLSLLVVAFIQQNIS------FLLGYSIPVG 235

Query: 227 LMVIALVVFAMGSKIYNKPPPEGNIVAQVFKC--------IWFAISNRFKNRSGDIPKRQ 278
            + +A  +F   + ++   PP G+ V+ + K         +W   S R +  +  +   +
Sbjct: 236 CVGLAFFIFLFATPVFITKPPMGSQVSSMLKLALQNCCPQLWQRHSARDRQCARVLADER 295

Query: 279 HWLDWAAEKYPKQLIMDVKALTRVLFLYIPLPMFWALLDQQGSRWTLQAIRMN------- 331
                A+   P++ I + + L ++L + + L  +W +  Q  S + LQ + ++       
Sbjct: 296 SPQPGAS---PQEDIANFQVLVKILPVMVTLVPYWMVYFQMQSTYVLQGLHLHIPNIFPA 352

Query: 332 ---------RNLGFFVLQPDQMQVL-NPLLVLIFIPLFDFVIYRLVSKCGINFSSLRKMA 381
                    R  G     P+   +L N ++VLI +PL D +I  L+ +C +  S+L+KMA
Sbjct: 353 NPANISVALRAQGSSYTIPEAWLLLANVVVVLILVPLKDRLIDPLLLRCKLLPSALQKMA 412

Query: 382 VGMILACLAFAVAAAVEIK 400
           +GM     +  VA  +E++
Sbjct: 413 LGMFFGFTSVIVAGVLEME 431



 Score = 53.9 bits (128), Expect = 5e-07
 Identities = 23/57 (40%), Positives = 36/57 (63%)

Query: 603 ANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNII 659
           A  +SI WQ+PQY L+   E+  S+ GLEF+YS+AP SM+  +   +     VG+++
Sbjct: 453 AAPLSIWWQIPQYLLIGISEIFASIPGLEFAYSEAPRSMQGAIMGIFFCLSGVGSLL 509


>gi|91208420 bassoon protein [Homo sapiens]
          Length = 3926

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 12/32 (37%), Positives = 20/32 (62%)

Query: 15   SPVSIEEVPPRPPSPPKKPSPTICGSNYPLSI 46
            +P S+ ++PP PP PP  P     G++ PL++
Sbjct: 1598 TPPSVSQLPPEPPGPPGFPRVPSAGADGPLAL 1629


>gi|215490098 spinster homolog 1 isoform 4 [Homo sapiens]
          Length = 454

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 41/179 (22%), Positives = 70/179 (39%), Gaps = 38/179 (21%)

Query: 92  LCYFTPILGAAIADSWLGKFKTIIYLSLVYVLGHVIKSLG----------------ALPI 135
           LCY   +       +++ +F   +++S   VL  V   LG                +L  
Sbjct: 65  LCYINLL-------NYMDRFTVAVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVT 117

Query: 136 LGGQVV---HTVLSLIGLSLIALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSIN 192
           LG   +   H  L L+   L+ +G             D F    A++R+R  S+FY +I 
Sbjct: 118 LGSSFIPGEHFWLLLLTRGLVGVGEASYSTIAPTLIADLFV---ADQRSRMLSIFYFAIP 174

Query: 193 AGSLISTFITPMLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNI 251
            GS +       ++      G+  +AL    PGL +V  L++F     +  + PP G +
Sbjct: 175 VGSGLGYIAGSKVK---DMAGDWHWALRV-TPGLGVVAVLLLF-----LVVREPPRGAV 224


>gi|21362092 1-acylglycerol-3-phosphate O-acyltransferase 9 [Homo
           sapiens]
          Length = 434

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 37/162 (22%), Positives = 64/162 (39%), Gaps = 49/162 (30%)

Query: 5   QKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAF---------IVVNEFC 55
           +K   KE++    +   +  R  SP +K    + G ++ LS  F         IV +E  
Sbjct: 54  EKGTPKESILKNSASVGIIQRDESPMEKGLSGLRGRDFELSDVFYFSKKGLEAIVEDEVT 113

Query: 56  ERFSYYGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKTII 115
           +RFS   +           + WN  T T++   + SL                       
Sbjct: 114 QRFSSEEL-----------VSWNLLTRTNVNFQYISL----------------------- 139

Query: 116 YLSLVYVLGHVIKSLGALPILGGQVVHTVLSLIGLSLIALGT 157
            L++V+VLG +++    LP+         L+ IG+SL+ +GT
Sbjct: 140 RLTMVWVLGVIVRYCVLLPL------RVTLAFIGISLLVIGT 175


>gi|21735483 transient receptor potential cation channel, subfamily
           V, member 3 [Homo sapiens]
          Length = 790

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 2/58 (3%)

Query: 638 PSSMKSVLQAAWLLTIAVGNIIVLVVAQFSGLVQWAEFILFSCLLLVICLIFSIMGYY 695
           PS ++S+L  AW   +     ++++++ F  L  + E++  +CL+L + L ++ M YY
Sbjct: 510 PSDLQSILSDAWFHFVFFIQAVLVILSVFLYLFAYKEYL--ACLVLAMALGWANMLYY 565


>gi|116063558 tet oncogene family member 2 isoform b [Homo sapiens]
          Length = 1165

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 16/39 (41%), Positives = 19/39 (48%)

Query: 7   NESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLS 45
           N+S  TL   V IE  P  PPS    PS  +C  +  LS
Sbjct: 439 NQSNTTLLREVKIEGKPEAPPSQSPNPSTHVCSPSPMLS 477


>gi|187761317 tet oncogene family member 2 isoform a [Homo sapiens]
          Length = 2002

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 16/39 (41%), Positives = 19/39 (48%)

Query: 7   NESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLS 45
           N+S  TL   V IE  P  PPS    PS  +C  +  LS
Sbjct: 439 NQSNTTLLREVKIEGKPEAPPSQSPNPSTHVCSPSPMLS 477


>gi|14150076 Yip1 domain family, member 4 [Homo sapiens]
          Length = 244

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 8/93 (8%)

Query: 106 SWLGKFKTIIYLSLVYVLGHVIKSLGALPILGGQVVH-TVLSLIGLSLIALGTGGIKPCV 164
           S  G+F+ + ++  +++ G +   L A  +LGG+V +  VL +IG SL+ L    I P +
Sbjct: 129 SLYGQFRVVSWIITIWIFGSLTIFLLAR-VLGGEVAYGQVLGVIGYSLLPLIV--IAPVL 185

Query: 165 AAFGGDQFEEKHAEERTRYFSVFYLSINAGSLI 197
              G  +          + F VF+ + +A SL+
Sbjct: 186 LVVGSFEV----VSTLIKLFGVFWAAYSAASLL 214


>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
          Length = 3571

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 5    QKNESKETLF--SPVSIEEVPPRPPSPPKKPSPTICGSNYPLSI 46
            Q  E+ + L+  SP S E  PP PP PP  P+P    S  P+ I
Sbjct: 1939 QYREAYDKLYPISPSSPETPPPPPPPPPLPPAPPQPSSMGPVKI 1982


>gi|31543806 thrombospondin 4 precursor [Homo sapiens]
          Length = 961

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)

Query: 15  SPVSIEEVPPRPPSPPKKPSPTICGSN 41
           SP     VPP PP+PP +P P  C SN
Sbjct: 268 SPTPSTVVPPAPPAPPTRP-PRRCDSN 293


>gi|215490102 spinster homolog 1 isoform 3 [Homo sapiens]
          Length = 476

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 32/168 (19%)

Query: 103 IADSWLGKFKTIIYLSLVYVLGHVIKSLG----------------ALPILGGQVV---HT 143
           I DS  G  +T+ ++S   VL  V   LG                +L  LG   +   H 
Sbjct: 92  IGDSSSGLIQTV-FISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLGSSFIPGEHF 150

Query: 144 VLSLIGLSLIALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITP 203
            L L+   L+ +G             D F    A++R+R  S+FY +I  GS +      
Sbjct: 151 WLLLLTRGLVGVGEASYSTIAPTLIADLFV---ADQRSRMLSIFYFAIPVGSGLGYIAGS 207

Query: 204 MLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNI 251
            ++      G+  +AL    PGL +V  L++F     +  + PP G +
Sbjct: 208 KVK---DMAGDWHWALRV-TPGLGVVAVLLLF-----LVVREPPRGAV 246


>gi|215490100 spinster homolog 1 isoform 2 [Homo sapiens]
          Length = 455

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 32/168 (19%)

Query: 103 IADSWLGKFKTIIYLSLVYVLGHVIKSLG----------------ALPILGGQVV---HT 143
           I DS  G  +T+ ++S   VL  V   LG                +L  LG   +   H 
Sbjct: 19  IGDSSSGLIQTV-FISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLGSSFIPGEHF 77

Query: 144 VLSLIGLSLIALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITP 203
            L L+   L+ +G             D F    A++R+R  S+FY +I  GS +      
Sbjct: 78  WLLLLTRGLVGVGEASYSTIAPTLIADLFV---ADQRSRMLSIFYFAIPVGSGLGYIAGS 134

Query: 204 MLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNI 251
            ++      G+  +AL    PGL +V  L++F     +  + PP G +
Sbjct: 135 KVK---DMAGDWHWALRV-TPGLGVVAVLLLF-----LVVREPPRGAV 173


>gi|215490096 spinster homolog 1 isoform 1 [Homo sapiens]
          Length = 528

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 32/168 (19%)

Query: 103 IADSWLGKFKTIIYLSLVYVLGHVIKSLG----------------ALPILGGQVV---HT 143
           I DS  G  +T+ ++S   VL  V   LG                +L  LG   +   H 
Sbjct: 92  IGDSSSGLIQTV-FISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLGSSFIPGEHF 150

Query: 144 VLSLIGLSLIALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITP 203
            L L+   L+ +G             D F    A++R+R  S+FY +I  GS +      
Sbjct: 151 WLLLLTRGLVGVGEASYSTIAPTLIADLFV---ADQRSRMLSIFYFAIPVGSGLGYIAGS 207

Query: 204 MLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNI 251
            ++      G+  +AL    PGL +V  L++F     +  + PP G +
Sbjct: 208 KVK---DMAGDWHWALRV-TPGLGVVAVLLLF-----LVVREPPRGAV 246


>gi|14042968 spinster homolog 1 isoform 1 [Homo sapiens]
          Length = 528

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 32/168 (19%)

Query: 103 IADSWLGKFKTIIYLSLVYVLGHVIKSLG----------------ALPILGGQVV---HT 143
           I DS  G  +T+ ++S   VL  V   LG                +L  LG   +   H 
Sbjct: 92  IGDSSSGLIQTV-FISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLGSSFIPGEHF 150

Query: 144 VLSLIGLSLIALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITP 203
            L L+   L+ +G             D F    A++R+R  S+FY +I  GS +      
Sbjct: 151 WLLLLTRGLVGVGEASYSTIAPTLIADLFV---ADQRSRMLSIFYFAIPVGSGLGYIAGS 207

Query: 204 MLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNI 251
            ++      G+  +AL    PGL +V  L++F     +  + PP G +
Sbjct: 208 KVK---DMAGDWHWALRV-TPGLGVVAVLLLF-----LVVREPPRGAV 246


>gi|21361891 SH2 domain containing 4A [Homo sapiens]
          Length = 454

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 13/27 (48%), Positives = 16/27 (59%)

Query: 5   QKNESKETLFSPVSIEEVPPRPPSPPK 31
           QK    E L SP+ + + P RPP PPK
Sbjct: 265 QKGRGGERLQSPLRVPQKPERPPLPPK 291


>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
          Length = 663

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 16  PVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAFIVVNE 53
           P  +  +PP PP PP  P P   G   P S  F  ++E
Sbjct: 403 PDELAGLPPPPPPPPPPPPPPPAGGAKPCSKTFGTMHE 440


>gi|46409292 dpy-19-like 3 [Homo sapiens]
          Length = 716

 Score = 30.4 bits (67), Expect = 6.1
 Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 9/60 (15%)

Query: 607 SIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNIIVLVVAQF 666
           S+ WQ  Q+ ++    V+F++  L+         M   ++A WL  I + +++++ + QF
Sbjct: 255 SLTWQFNQFMMLMQALVLFTLDSLD---------MLPAVKATWLYGIQITSLLLVCILQF 305


>gi|55770852 glutamate receptor, ionotropic, delta 1 precursor [Homo
           sapiens]
          Length = 1009

 Score = 30.4 bits (67), Expect = 6.1
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 13/71 (18%)

Query: 380 MAVGMILACLAFAVAAAVEIKINEMAPAQPGPQEVFLQVLNLADDEVKVTVVGNENNSLL 439
           +A+G++LACL     AA+E+  N     Q  P+E         D EV +  V    NSL+
Sbjct: 838 LAIGLLLACL----VAALELWWNSNRCHQETPKE---------DKEVNLEQVHRRMNSLM 884

Query: 440 IESIKSFQKTP 450
            E I   Q +P
Sbjct: 885 DEDIAHKQISP 895


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.138    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,375,932
Number of Sequences: 37866
Number of extensions: 1209527
Number of successful extensions: 6748
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 6676
Number of HSP's gapped (non-prelim): 62
length of query: 729
length of database: 18,247,518
effective HSP length: 110
effective length of query: 619
effective length of database: 14,082,258
effective search space: 8716917702
effective search space used: 8716917702
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press