Guide to the Human Genome
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Name: TLL1 Sequence: fasta or formatted (1013aa) NCBI GI: 22547221
Description:

tolloid-like 1

Referenced in:

Collagen

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         42           2
 C cysteine            3.9         40           2
 D aspartate           6.2         63           2
 E glutamate           7.7         78           3
 F phenylalanine       5.1         52           2
 G glycine             9.3         94           2
 H histidine           2.8         28           1
 I isoleucine          5.4         55           2
 K lysine              5.7         58           2
 L leucine             6.0         61           2
 M methionine          1.6         16           1
 N asparagine          4.6         47           2
 P proline             4.7         48           2
 Q glutamine           3.2         32           1
 R arginine            5.8         59           2
 S serine              6.9         70           3
 T threonine           5.5         56           2
 V valine              5.2         53           2
 W tryptophan          1.9         19           1
 Y tyrosine            4.1         42           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tolloid-like 1 
TLL2                  0.735   tolloid-like 2 
BMP1                  0.732   bone morphogenetic protein 1 isoform 3 precursor [Hom...
BMP1                  0.515   bone morphogenetic protein 1 isoform 1 precursor [Hom...
BMP1                  0.513   bone morphogenetic protein 1 isoform 2 precursor [Hom...
CUBN                  0.139   cubilin 
CDCP2                 0.092   CUB domain containing protein 2 
CSMD3                 0.091   CUB and Sushi multiple domains 3 isoform 2 
CSMD3                 0.091   CUB and Sushi multiple domains 3 isoform 3 
CSMD3                 0.091   CUB and Sushi multiple domains 3 isoform 1 
CSMD2                 0.088   CUB and Sushi multiple domains 2 
CSMD1                 0.086   CUB and Sushi multiple domains 1 
PCOLCE                0.068   procollagen C-endopeptidase enhancer 
MASP1                 0.067   mannan-binding lectin serine protease 1 isoform 3 [H...
MASP1                 0.067   mannan-binding lectin serine protease 1 isoform 2 pr...
MASP1                 0.067   mannan-binding lectin serine protease 1 isoform 1 pr...
MFRP                  0.063   membrane frizzled-related protein 
PCOLCE2               0.062   procollagen C-endopeptidase enhancer 2 
NRP2                  0.060   neuropilin 2 isoform 3 precursor 
NRP2                  0.060   neuropilin 2 isoform 5 precursor 
NRP2                  0.060   neuropilin 2 isoform 1 precursor 
NRP2                  0.060   neuropilin 2 isoform 6 precursor 
NRP2                  0.060   neuropilin 2 isoform 4 precursor 
NRP2                  0.060   neuropilin 2 isoform 2 precursor 
LOC100291777          0.059   PREDICTED: similar to DMBT1 isoform 1 
LOC100291777          0.059   PREDICTED: similar to DMBT1 isoform 2 
DMBT1                 0.059   deleted in malignant brain tumors 1 isoform c precu...
DMBT1                 0.059   deleted in malignant brain tumors 1 isoform b precu...
DMBT1                 0.059   deleted in malignant brain tumors 1 isoform a precu...
C1R                   0.058   complement component 1, r subcomponent 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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