POP1 15053

Name: POP1	Sequence: fasta or formatted (1024aa)		NCBI GI: 225007648
Description: processing of precursor 1		Referenced in: RNases and RNA Stability
Other entries for this name: alt mRNA [1024aa] processing of precursor 1 alt mRNA [1024aa] processing of precursor 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 67 2 C cysteine 2.9 30 2 D aspartate 3.5 36 2 E glutamate 7.5 77 3 F phenylalanine 2.3 24 1 G glycine 7.2 74 2 H histidine 3.3 34 2 I isoleucine 4.6 47 3 K lysine 8.0 82 3 L leucine 9.0 92 3 M methionine 2.1 21 1 N asparagine 2.6 27 1 P proline 7.3 75 2 Q glutamine 5.1 52 2 R arginine 6.9 71 3 S serine 7.9 81 3 T threonine 4.7 48 2 V valine 4.9 50 1 W tryptophan 2.1 21 2 Y tyrosine 1.5 15 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 processing of precursor 1 POP1 1.000 processing of precursor 1 POP1 1.000 processing of precursor 1 ALS2CR4 0.005 amyotrophic lateral sclerosis 2 (juvenile) chromoso... ALS2CR4 0.005 amyotrophic lateral sclerosis 2 (juvenile) chromoso... ATXN7L2 0.005 ataxin 7-like 2 TRH 0.004 thyrotropin-releasing hormone GLTSCR1 0.004 glioma tumor suppressor candidate region gene 1 [Ho... AP3D1 0.004 adaptor-related protein complex 3, delta 1 subunit ... LOC728636 0.004 PREDICTED: similar to golgi autoantigen, golgin sub... LOC647042 0.004 PREDICTED: hypothetical protein isoform 2 LOC647042 0.004 PREDICTED: hypothetical protein isoform 1 LOC440295 0.004 hypothetical protein LOC440295 RBBP6 0.004 retinoblastoma-binding protein 6 isoform 2 RBBP6 0.004 retinoblastoma-binding protein 6 isoform 1 MAGEA6 0.003 melanoma antigen family A, 6 MAGEA6 0.003 melanoma antigen family A, 6 MAGEA3 0.003 melanoma antigen family A, 3 PHLDB2 0.003 pleckstrin homology-like domain, family B, member 2... PHLDB2 0.003 pleckstrin homology-like domain, family B, member 2... PHLDB2 0.003 pleckstrin homology-like domain, family B, member 2... PHLDB2 0.003 pleckstrin homology-like domain, family B, member 2 ... RIMBP3B 0.003 RIMS binding protein 3B RIMBP3C 0.003 RIMS binding protein 3C AKAP13 0.003 A-kinase anchor protein 13 isoform 1 AKAP13 0.003 A-kinase anchor protein 13 isoform 3 AKAP13 0.003 A-kinase anchor protein 13 isoform 2 AZI1 0.003 5-azacytidine induced 1 isoform b AZI1 0.003 5-azacytidine induced 1 isoform a TSC1 0.003 tuberous sclerosis 1 protein isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.