Guide to the Human Genome
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Name: WFS1 Sequence: fasta or formatted (890aa) NCBI GI: 224994203
Description:

wolframin

Referenced in:

Auditory and Vestibular Functions

Other entries for this name:
alt mRNA [890aa] wolframin
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         72           3
 C cysteine            2.2         20           1
 D aspartate           3.9         35           3
 E glutamate           6.3         56           3
 F phenylalanine       5.8         52           4
 G glycine             5.3         47           2
 H histidine           2.0         18           2
 I isoleucine          4.5         40           2
 K lysine              5.1         45           4
 L leucine            12.2        109           3
 M methionine          2.1         19           1
 N asparagine          2.6         23           1
 P proline             5.6         50           3
 Q glutamine           3.0         27           2
 R arginine            5.8         52           2
 S serine              7.3         65           2
 T threonine           5.4         48           1
 V valine              7.6         68           2
 W tryptophan          2.0         18           2
 Y tyrosine            2.9         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   wolframin 
WFS1                  1.000   wolframin 
LOC100292143          0.009   PREDICTED: hypothetical protein 
LOC100132261          0.009   PREDICTED: similar to hCG2023245 
YAP1                  0.009   Yes-associated protein 1, 65kDa isoform 2 
YAP1                  0.009   Yes-associated protein 1, 65kDa isoform 1 
LOC100127891          0.008   PREDICTED: hypothetical protein 
LOC651856             0.008   PREDICTED: similar to hCG2023245 
HS6ST3                0.008   PREDICTED: heparan sulfate 6-O-sulfotransferase 3 [...
HS6ST3                0.008   heparan sulfate 6-O-sulfotransferase 3 
FAM47B                0.008   hypothetical protein LOC170062 
RFX1                  0.007   regulatory factor X1 
PELP1                 0.007   proline, glutamic acid and leucine rich protein 1 [...
FNBP4                 0.007   formin binding protein 4 
CGREF1                0.007   cell growth regulator with EF-hand domain 1 
SH3BP1                0.007   SH3-domain binding protein 1 
BSN                   0.007   bassoon protein 
CREBBP                0.007   CREB binding protein isoform b 
CREBBP                0.007   CREB binding protein isoform a 
BAG3                  0.007   BCL2-associated athanogene 3 
DISP2                 0.007   dispatched B 
LOC100130360          0.007   PREDICTED: hypothetical protein 
ZNF628                0.007   zinc finger protein 628 
LOC100132234          0.007   PREDICTED: hypothetical protein LOC100132234 
BAT2                  0.007   HLA-B associated transcript-2 
DGKK                  0.007   diacylglycerol kinase kappa 
LOC645722             0.006   PREDICTED: similar to hCG2037003 
RAX                   0.006   retina and anterior neural fold homeobox 
SFPQ                  0.006   splicing factor proline/glutamine rich (polypyrimidin...
PRR12                 0.006   proline rich 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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