| Name: XPC | Sequence: fasta or formatted (940aa) | NCBI GI: 224809295 | |
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Description: xeroderma pigmentosum, complementation group C isoform 1
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Referenced in: DNases, Recombination, and DNA Repair
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Other entries for this name:
alt prot [903aa] xeroderma pigmentosum, complementation group C isoform 2 | |||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 7.8 73 3 C cysteine 1.6 15 1 D aspartate 5.4 51 2 E glutamate 10.1 95 5 F phenylalanine 2.7 25 1 G glycine 6.7 63 3 H histidine 2.4 23 2 I isoleucine 2.8 26 2 K lysine 9.9 93 3 L leucine 8.3 78 2 M methionine 1.2 11 2 N asparagine 2.4 23 2 P proline 5.6 53 2 Q glutamine 3.3 31 1 R arginine 7.8 73 2 S serine 8.1 76 7 T threonine 4.6 43 2 V valine 5.4 51 2 W tryptophan 1.4 13 2 Y tyrosine 2.6 24 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 xeroderma pigmentosum, complementation group C isof... XPC 0.953 xeroderma pigmentosum, complementation group C isof... CTR9 0.015 SH2 domain binding protein 1 SFRS4 0.014 splicing factor, arginine/serine-rich 4 CHD9 0.014 chromodomain helicase DNA binding protein 9 BASP1 0.014 brain abundant, membrane attached signal protein 1 [... NOLC1 0.013 nucleolar and coiled-body phosphoprotein 1 NEFH 0.013 neurofilament, heavy polypeptide 200kDa CRKRS 0.013 Cdc2-related kinase, arginine/serine-rich isoform 2... CRKRS 0.013 Cdc2-related kinase, arginine/serine-rich isoform 1... PAF1 0.013 Paf1, RNA polymerase II associated factor, homolog [... GPATCH8 0.013 G patch domain containing 8 LOC100133923 0.013 PREDICTED: similar to UPF0634 protein C GTF2F1 0.013 general transcription factor IIF, polypeptide 1, 74... RBM25 0.012 RNA binding motif protein 25 ANKRD36 0.012 PREDICTED: ankyrin repeat domain 36 ANKRD36 0.012 PREDICTED: ankyrin repeat domain 36 PPIG 0.012 peptidylprolyl isomerase G HDGF2 0.012 hepatoma-derived growth factor-related protein 2 iso... SRRM1 0.011 serine/arginine repetitive matrix 1 HDGF2 0.011 hepatoma-derived growth factor-related protein 2 iso... PCDH15 0.011 protocadherin 15 isoform CD2-1 precursor SRRM2 0.011 splicing coactivator subunit SRm300 MLLT1 0.011 myeloid/lymphoid or mixed-lineage leukemia (trithora... PDS5B 0.011 PDS5, regulator of cohesion maintenance, homolog B [H... TNRC18 0.011 trinucleotide repeat containing 18 FLG 0.011 filaggrin MAP1B 0.011 microtubule-associated protein 1B ZNF318 0.011 zinc finger protein 318 SFRS12 0.011 splicing factor, arginine/serine-rich 12 isoform a ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
