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Search of human proteins with 224451077
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|224451077 HBV PreS1-transactivated protein 3 isoform b [Homo
sapiens]
(399 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|224451077 HBV PreS1-transactivated protein 3 isoform b [Homo ... 790 0.0
gi|93102389 HBV PreS1-transactivated protein 3 isoform a [Homo s... 712 0.0
gi|158534055 round spermatid basic protein 1-like [Homo sapiens] 37 0.041
gi|33188443 microfilament and actin filament cross-linker protei... 35 0.092
gi|33188445 microfilament and actin filament cross-linker protei... 35 0.092
gi|115298659 spectrin, alpha, erythrocytic 1 [Homo sapiens] 35 0.092
gi|55770834 centromere protein F [Homo sapiens] 35 0.092
gi|213385278 TNF receptor-associated factor 3 interacting protei... 35 0.12
gi|20070262 TNF receptor-associated factor 3 interacting protein... 35 0.12
gi|52345626 clusterin associated protein 1 isoform 1 [Homo sapiens] 35 0.16
gi|7705415 hook homolog 1 [Homo sapiens] 33 0.45
gi|35038601 spindle assembly abnormal protein 6 [Homo sapiens] 32 0.78
gi|21359945 chromosome condensation protein G [Homo sapiens] 32 1.0
gi|154277120 spectrin repeat containing, nuclear envelope 1 isof... 32 1.0
gi|154277118 spectrin repeat containing, nuclear envelope 1 isof... 32 1.0
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 32 1.0
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 32 1.0
gi|31581524 cordon-bleu homolog [Homo sapiens] 32 1.0
gi|40548422 chromatin modifying protein 4A [Homo sapiens] 32 1.3
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 32 1.3
gi|42740899 CTAGE family, member 5 isoform 3 [Homo sapiens] 32 1.3
gi|42740897 CTAGE family, member 5 isoform 1 [Homo sapiens] 32 1.3
gi|42740901 CTAGE family, member 5 isoform 4 [Homo sapiens] 32 1.3
gi|42740905 CTAGE family, member 5 isoform 2 [Homo sapiens] 32 1.3
gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo ... 31 2.3
gi|50843820 sickle tail isoform 1 [Homo sapiens] 31 2.3
gi|55770895 ERBB2 interacting protein isoform 7 [Homo sapiens] 31 2.3
gi|8923909 ERBB2 interacting protein isoform 2 [Homo sapiens] 31 2.3
gi|148229134 ring finger and KH domain containing 2 [Homo sapiens] 31 2.3
gi|44681484 cell division cycle associated 2 [Homo sapiens] 31 2.3
>gi|224451077 HBV PreS1-transactivated protein 3 isoform b [Homo
sapiens]
Length = 399
Score = 790 bits (2041), Expect = 0.0
Identities = 399/399 (100%), Positives = 399/399 (100%)
Query: 1 MATGDLKRSLRNLEQVLRLLNYPEEVDCVGLIKGDPAASLPIISYSFTSYSPYVTELIME 60
MATGDLKRSLRNLEQVLRLLNYPEEVDCVGLIKGDPAASLPIISYSFTSYSPYVTELIME
Sbjct: 1 MATGDLKRSLRNLEQVLRLLNYPEEVDCVGLIKGDPAASLPIISYSFTSYSPYVTELIME 60
Query: 61 SNVELIAKNDLRFIDAVYKLLRDQFNYKPILTKKQFIQCGFAEWKIQIVCDILNCVMKKH 120
SNVELIAKNDLRFIDAVYKLLRDQFNYKPILTKKQFIQCGFAEWKIQIVCDILNCVMKKH
Sbjct: 61 SNVELIAKNDLRFIDAVYKLLRDQFNYKPILTKKQFIQCGFAEWKIQIVCDILNCVMKKH 120
Query: 121 KELSSLQKIPSQQRKKISSGKSEPPLGNEKISAEAVGVDISGRFMTSGKKKAVVIRHLYN 180
KELSSLQKIPSQQRKKISSGKSEPPLGNEKISAEAVGVDISGRFMTSGKKKAVVIRHLYN
Sbjct: 121 KELSSLQKIPSQQRKKISSGKSEPPLGNEKISAEAVGVDISGRFMTSGKKKAVVIRHLYN 180
Query: 181 EDNVDISEDTLSPITDVNEAVDVSDLNATEIKMPEVKVPEIKAEQQDVNVNPEITALQTM 240
EDNVDISEDTLSPITDVNEAVDVSDLNATEIKMPEVKVPEIKAEQQDVNVNPEITALQTM
Sbjct: 181 EDNVDISEDTLSPITDVNEAVDVSDLNATEIKMPEVKVPEIKAEQQDVNVNPEITALQTM 240
Query: 241 LAECQENLKKLTSIEKRLDCLEQKMKGKVMVDENTWTNLLSRVTLLETEMLLSKKNDEFI 300
LAECQENLKKLTSIEKRLDCLEQKMKGKVMVDENTWTNLLSRVTLLETEMLLSKKNDEFI
Sbjct: 241 LAECQENLKKLTSIEKRLDCLEQKMKGKVMVDENTWTNLLSRVTLLETEMLLSKKNDEFI 300
Query: 301 EFNEVSEDYASCSDMDLLNPHRKSEVERPASIPLSSGYSTASSDSTPRASTVNYCGLNEI 360
EFNEVSEDYASCSDMDLLNPHRKSEVERPASIPLSSGYSTASSDSTPRASTVNYCGLNEI
Sbjct: 301 EFNEVSEDYASCSDMDLLNPHRKSEVERPASIPLSSGYSTASSDSTPRASTVNYCGLNEI 360
Query: 361 SENFPAWSATSSCSSLSWLLRGHTSYLSSQSFAWPLSCV 399
SENFPAWSATSSCSSLSWLLRGHTSYLSSQSFAWPLSCV
Sbjct: 361 SENFPAWSATSSCSSLSWLLRGHTSYLSSQSFAWPLSCV 399
>gi|93102389 HBV PreS1-transactivated protein 3 isoform a [Homo
sapiens]
Length = 390
Score = 712 bits (1837), Expect = 0.0
Identities = 362/362 (100%), Positives = 362/362 (100%)
Query: 1 MATGDLKRSLRNLEQVLRLLNYPEEVDCVGLIKGDPAASLPIISYSFTSYSPYVTELIME 60
MATGDLKRSLRNLEQVLRLLNYPEEVDCVGLIKGDPAASLPIISYSFTSYSPYVTELIME
Sbjct: 1 MATGDLKRSLRNLEQVLRLLNYPEEVDCVGLIKGDPAASLPIISYSFTSYSPYVTELIME 60
Query: 61 SNVELIAKNDLRFIDAVYKLLRDQFNYKPILTKKQFIQCGFAEWKIQIVCDILNCVMKKH 120
SNVELIAKNDLRFIDAVYKLLRDQFNYKPILTKKQFIQCGFAEWKIQIVCDILNCVMKKH
Sbjct: 61 SNVELIAKNDLRFIDAVYKLLRDQFNYKPILTKKQFIQCGFAEWKIQIVCDILNCVMKKH 120
Query: 121 KELSSLQKIPSQQRKKISSGKSEPPLGNEKISAEAVGVDISGRFMTSGKKKAVVIRHLYN 180
KELSSLQKIPSQQRKKISSGKSEPPLGNEKISAEAVGVDISGRFMTSGKKKAVVIRHLYN
Sbjct: 121 KELSSLQKIPSQQRKKISSGKSEPPLGNEKISAEAVGVDISGRFMTSGKKKAVVIRHLYN 180
Query: 181 EDNVDISEDTLSPITDVNEAVDVSDLNATEIKMPEVKVPEIKAEQQDVNVNPEITALQTM 240
EDNVDISEDTLSPITDVNEAVDVSDLNATEIKMPEVKVPEIKAEQQDVNVNPEITALQTM
Sbjct: 181 EDNVDISEDTLSPITDVNEAVDVSDLNATEIKMPEVKVPEIKAEQQDVNVNPEITALQTM 240
Query: 241 LAECQENLKKLTSIEKRLDCLEQKMKGKVMVDENTWTNLLSRVTLLETEMLLSKKNDEFI 300
LAECQENLKKLTSIEKRLDCLEQKMKGKVMVDENTWTNLLSRVTLLETEMLLSKKNDEFI
Sbjct: 241 LAECQENLKKLTSIEKRLDCLEQKMKGKVMVDENTWTNLLSRVTLLETEMLLSKKNDEFI 300
Query: 301 EFNEVSEDYASCSDMDLLNPHRKSEVERPASIPLSSGYSTASSDSTPRASTVNYCGLNEI 360
EFNEVSEDYASCSDMDLLNPHRKSEVERPASIPLSSGYSTASSDSTPRASTVNYCGLNEI
Sbjct: 301 EFNEVSEDYASCSDMDLLNPHRKSEVERPASIPLSSGYSTASSDSTPRASTVNYCGLNEI 360
Query: 361 SE 362
SE
Sbjct: 361 SE 362
>gi|158534055 round spermatid basic protein 1-like [Homo sapiens]
Length = 846
Score = 36.6 bits (83), Expect = 0.041
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 9/173 (5%)
Query: 118 KKHKELSSLQKIPSQQRKKISSGKSEPPLGNEKISAEAVGVDISGRFMTSGKKKAVVIRH 177
KKHK ++ ++K + + + SGK +P E + + V + + K+K
Sbjct: 214 KKHKVMNEIKKENGEVKILLKSGKEKPKTNIEDLQIKKVKKKKKKKHKENEKRKR---PK 270
Query: 178 LYNEDNVDISEDTLSPITDVNEAVDVSDLNATEIKMPEVKVPEIKAEQQDVNVNPEITAL 237
+Y++ I L TDV + LN IK K + K + N E +
Sbjct: 271 MYSKSIQTICSGLL---TDVEDQAAKGILN-DNIKDYVGKNLDTKNYDSKIPENSEFPFV 326
Query: 238 QTMLAECQENLKKLTSIE-KRLDCLEQKMKGKVMVDENTWTNLLSRVTLLETE 289
Q NLK+L ++E K+L +E + G V + ++N LS ++ +E E
Sbjct: 327 SLKEPRVQNNLKRLDTLEFKQLIHIEHQPNGGASV-IHAYSNELSHLSPMEME 378
>gi|33188443 microfilament and actin filament cross-linker protein
isoform b [Homo sapiens]
Length = 5938
Score = 35.4 bits (80), Expect = 0.092
Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 27/232 (11%)
Query: 103 EWKIQIVCDILNCVMKKHKELSSLQKIPSQQRKKISSGKSEPPLGNEKISAEAVGVD--- 159
+W + +I+N + K Q P Q + + +G + + + + G++
Sbjct: 3694 QWVVGTEVEIINQQLADFKMFQKEQVDPLQMKLQQVNGLGQGLIQSAGKDCDVQGLEHDM 3753
Query: 160 --ISGRFMTSGKKKAVVIRHLYNED-NVDISEDTLSPITDVNEAVDVSDLNATEIKMPEV 216
I+ R+ T KK A I L + +D L P+ ++ D +L A + K P
Sbjct: 3754 EEINARWNTLNKKVAQRIAQLQEALLHCGKFQDALEPL--LSWLADTEELIANQ-KPPSA 3810
Query: 217 KVPEIKAEQQDVNVNPEITALQTMLAECQENLKKLTSIEKRLD-----CLEQKMKGKVMV 271
+ +KA+ Q+ + LQ +L + + + L + R+ +K+ G++
Sbjct: 3811 EYKVVKAQIQEQKL------LQRLLDDRKATVDMLQAEGGRIAQSAELADREKITGQLES 3864
Query: 272 DENTWTNLLSRVTL----LETEMLLSKKNDEFIEFNEVSEDYASCSDMDLLN 319
E+ WT LLS+ LE ++L+K +F E E D+ S ++ L N
Sbjct: 3865 LESRWTELLSKAAARQKQLEDILVLAK---QFHETAEPISDFLSVTEKKLAN 3913
>gi|33188445 microfilament and actin filament cross-linker protein
isoform a [Homo sapiens]
Length = 5430
Score = 35.4 bits (80), Expect = 0.092
Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 27/232 (11%)
Query: 103 EWKIQIVCDILNCVMKKHKELSSLQKIPSQQRKKISSGKSEPPLGNEKISAEAVGVD--- 159
+W + +I+N + K Q P Q + + +G + + + + G++
Sbjct: 3192 QWVVGTEVEIINQQLADFKMFQKEQVDPLQMKLQQVNGLGQGLIQSAGKDCDVQGLEHDM 3251
Query: 160 --ISGRFMTSGKKKAVVIRHLYNED-NVDISEDTLSPITDVNEAVDVSDLNATEIKMPEV 216
I+ R+ T KK A I L + +D L P+ ++ D +L A + K P
Sbjct: 3252 EEINARWNTLNKKVAQRIAQLQEALLHCGKFQDALEPL--LSWLADTEELIANQ-KPPSA 3308
Query: 217 KVPEIKAEQQDVNVNPEITALQTMLAECQENLKKLTSIEKRLD-----CLEQKMKGKVMV 271
+ +KA+ Q+ + LQ +L + + + L + R+ +K+ G++
Sbjct: 3309 EYKVVKAQIQEQKL------LQRLLDDRKATVDMLQAEGGRIAQSAELADREKITGQLES 3362
Query: 272 DENTWTNLLSRVTL----LETEMLLSKKNDEFIEFNEVSEDYASCSDMDLLN 319
E+ WT LLS+ LE ++L+K +F E E D+ S ++ L N
Sbjct: 3363 LESRWTELLSKAAARQKQLEDILVLAK---QFHETAEPISDFLSVTEKKLAN 3411
>gi|115298659 spectrin, alpha, erythrocytic 1 [Homo sapiens]
Length = 2419
Score = 35.4 bits (80), Expect = 0.092
Identities = 61/227 (26%), Positives = 95/227 (41%), Gaps = 49/227 (21%)
Query: 90 ILTKKQFIQCGFA--EWKIQIVC----DILNCVMKK---HKELSSLQKIPSQQRKKISSG 140
+L K + ++ FA E ++Q VC DILN V+++ +KE+SS KI +
Sbjct: 1857 LLMKHEALENDFAVHETRVQNVCAQGEDILNKVLQEESQNKEISS----------KIEAL 1906
Query: 141 KSEPPLGNEKISAEAVGVDISGRFMTSGKKKAVVIRHLYNEDNVDISEDTLSPITDVNEA 200
+ P + I+A + ++ F K VV I++ S T+ N A
Sbjct: 1907 NEKTPSLAKAIAAWKLQLEDDYAFQEFNWKADVV--------EAWIADKETSLKTNGNGA 1958
Query: 201 VDVSDLNATEIKMPEVKVPEIKAEQQDVNVNPEITALQTMLAECQENLKKLTSIEKRLDC 260
D+ D K + +Q+ + PEIT L+ L Q N K +IE+R
Sbjct: 1959 -DLGDFLTLLAKQDTLDASLQSFQQERL---PEITDLKDKLISAQHNQSK--AIEERYAA 2012
Query: 261 LEQKMKGKVMVDENTWTNLLS-----RVTLLETEMLLSKKNDEFIEF 302
L ++ W LL R LLE ++ L K D F+EF
Sbjct: 2013 LLKR-----------WEQLLEASAVHRQKLLEKQLPLQKAEDLFVEF 2048
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 35.4 bits (80), Expect = 0.092
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 237 LQTMLAECQENLKKLTSIEKRLDCLEQKMKGKVMVDENTWTNL-LSRVTLLETEMLLSKK 295
L + A+ QE K+ +E RL E++MKG+V + L ++V L+E E +L+K
Sbjct: 280 LDQLKAQNQELRNKINELELRLQGHEKEMKGQVNKFQELQLQLEKAKVELIEKEKVLNKC 339
Query: 296 NDEFI----EFNEVSEDYAS 311
DE + ++++ S Y +
Sbjct: 340 RDELVRTTAQYDQASTKYTA 359
Score = 30.8 bits (68), Expect = 2.3
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 119 KHKELSSLQKIPSQQRKKISSGKSEPPLGNEKISAEAVGVDISGRFMTSGKKKAVVIRHL 178
K+KE+ L+++ S +R+++ + + NE+ + V + + +KK L
Sbjct: 1577 KNKEIQELEQLLSSERQELDCLRKQYLSENEQWQQKLTSVTLEMESKLAAEKKQTEQLSL 1636
Query: 179 YNE------DNVDISE------DTLSPITDVNEAVDVSDLNATEI--KMPEVKVPEI--K 222
E +D+S DT I NE+ D+S + +E + P+ V +I K
Sbjct: 1637 ELEVARLQLQGLDLSSRSLLGIDTEDAIQGRNESCDISKEHTSETTERTPKHDVHQICDK 1696
Query: 223 AEQQDVNVNPE 233
QQD+N++ E
Sbjct: 1697 DAQQDLNLDIE 1707
>gi|213385278 TNF receptor-associated factor 3 interacting protein 1
isoform 2 [Homo sapiens]
Length = 625
Score = 35.0 bits (79), Expect = 0.12
Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 15/116 (12%)
Query: 124 SSLQKIPSQQRKKISSGKSEPPLGNEKISAEAVGVDISGRFMTSGKKKAVVIRHLYNEDN 183
S++++IP + S + PP + S EA+ +D SG SGK + VI +N DN
Sbjct: 387 SNIRRIP-----RPGSARPAPPRVKRQDSMEALQMDRSG----SGKTVSNVITESHNSDN 437
Query: 184 VDISEDTLSPITDVNEAVDVSDLNATEIKMPE------VKVPEIKAEQQDVNVNPE 233
+ + + ++E ++ + A E++ E K+ E K + + + +P+
Sbjct: 438 EEDDQFVVEAAPQLSEMSEIEMVTAVELEEEEKHGGLVKKILETKKDYEKLQQSPK 493
>gi|20070262 TNF receptor-associated factor 3 interacting protein 1
isoform 1 [Homo sapiens]
Length = 691
Score = 35.0 bits (79), Expect = 0.12
Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 15/116 (12%)
Query: 124 SSLQKIPSQQRKKISSGKSEPPLGNEKISAEAVGVDISGRFMTSGKKKAVVIRHLYNEDN 183
S++++IP + S + PP + S EA+ +D SG SGK + VI +N DN
Sbjct: 453 SNIRRIP-----RPGSARPAPPRVKRQDSMEALQMDRSG----SGKTVSNVITESHNSDN 503
Query: 184 VDISEDTLSPITDVNEAVDVSDLNATEIKMPE------VKVPEIKAEQQDVNVNPE 233
+ + + ++E ++ + A E++ E K+ E K + + + +P+
Sbjct: 504 EEDDQFVVEAAPQLSEMSEIEMVTAVELEEEEKHGGLVKKILETKKDYEKLQQSPK 559
>gi|52345626 clusterin associated protein 1 isoform 1 [Homo sapiens]
Length = 413
Score = 34.7 bits (78), Expect = 0.16
Identities = 68/344 (19%), Positives = 135/344 (39%), Gaps = 30/344 (8%)
Query: 8 RSLRNLEQVLRLLNYPEEVDCVGLIKGDPAASLPIISYSFTSYSPYVTELIMESNVELIA 67
R LRN +++R L YP + + ++ + Y P T++ + + E
Sbjct: 4 RDLRNFTEMMRALGYPRHISMENFRTPNFGLVSEVLLWLVKRYEPQ-TDIPPDVDTE--- 59
Query: 68 KNDLRFIDAVYKLLRDQFNYKPILTKKQFIQCGFAEWKIQIVCDIL-NCVMKKHKELSSL 126
++ + FI A+ + + + + K + TKK + G+A ++ + +L N + K E S +
Sbjct: 60 QDRVFFIKAIAQFMATKAHIK-LNTKKLYQADGYAVKELLKITSVLYNAMKTKGMEGSEI 118
Query: 127 -----QKIPSQQRKKISSGKSEPPLGNEKISAEAVGVDISGRFMTSGKKKA-VVIRHLYN 180
K KI+ K+ L +E S A D+ G + + + + R L
Sbjct: 119 VEEDVNKFKFDLGSKIADLKAARQLASEITSKGASLYDLLGMEVELREMRTEAIARPLEI 178
Query: 181 EDNVDISEDTLSPI-TDVNEAVDVSDLNATEIKMPEVKVPEIKAEQQDVNVNPEI----- 234
+ + + I T V + D+ + A++ E K+ + K E + E
Sbjct: 179 NETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLELERNRKRLETLQSVR 238
Query: 235 -----------TALQTMLAECQENLKKLTSIEKRLDCLEQKMKGKVMVDENTWTNLLSRV 283
LQ E + LT +E++L+ + + + +NT + +++
Sbjct: 239 PCFMDEYEKTEEELQKQYDTYLEKFQNLTYLEQQLEDHHRMEQERFEEAKNTLCLIQNKL 298
Query: 284 TLLETEMLLSKKNDEF-IEFNEVSEDYASCSDMDLLNPHRKSEV 326
E +L S ND+ I+ E E + + L P E+
Sbjct: 299 KEEEKRLLKSGSNDDSDIDIQEDDESDSELEERRLPKPQTAMEM 342
>gi|7705415 hook homolog 1 [Homo sapiens]
Length = 728
Score = 33.1 bits (74), Expect = 0.45
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 9/134 (6%)
Query: 181 EDNVDISEDTLSPITDVNEAVDVSDLNATEIKMPEVKVPEIKAEQQDVNVNPEITALQTM 240
E V+I L + D+ + V L T + V E++ N T L+T
Sbjct: 320 ESTVEIYRQKLQDLNDLRK--QVKTLQETNMMYMHNTV---SLEEELKKANAARTQLETY 374
Query: 241 LAECQENLKKLTSIEKRLDCLEQKMKGKVMVDENTWTNLLSRVTLLETEMLLSKKNDEFI 300
+ Q+ KL+S KR D L +MK ++E L + L+E L + N+E +
Sbjct: 375 KRQVQDLHVKLSSESKRADTLAFEMK---RLEEKHEALLKEKERLIEQRDTLKETNEE-L 430
Query: 301 EFNEVSEDYASCSD 314
++V +D+ + +D
Sbjct: 431 RCSQVQQDHLNQTD 444
>gi|35038601 spindle assembly abnormal protein 6 [Homo sapiens]
Length = 657
Score = 32.3 bits (72), Expect = 0.78
Identities = 48/229 (20%), Positives = 98/229 (42%), Gaps = 45/229 (19%)
Query: 119 KHKELSSLQKIPSQQ------RKKISSGKSE-PPLGNEKISAEAVGVDISGRFMTSGKKK 171
K ++LS +Q + RK ++ K E L NE S A + + +T+ K+K
Sbjct: 161 KEEKLSLMQSLDDATKQLDFTRKTLAEKKQELDKLRNEWASHTAALTNKHSQELTNEKEK 220
Query: 172 AVVIRHLYNEDNVDISED-------TLSPITDVNEAVDVSDLNATEIKMP-EVKVPEIKA 223
A+ + Y + + +D + + + ++ ++ + TE K + + E+KA
Sbjct: 221 ALQAQVQYQQQHEQQKKDLEILHQQNIHQLQNRLSELEAANKDLTERKYKGDSTIRELKA 280
Query: 224 -----EQQDVNVNPEITALQ----TMLAECQENLKKLTSIEKRLDCLEQKMKG------- 267
E++ E+ +L+ T+ EC E K + ++ ++ LEQ++K
Sbjct: 281 KLSGVEEELQRTKQEVLSLRRENSTLDVECHEKEKHVNQLQTKVAVLEQEIKDKDQLVLR 340
Query: 268 -----------KVMVDENTWTNLLSRVTLLETEMLLSKKNDEFIEFNEV 305
KV+++EN N +V L + E + + E ++ NE+
Sbjct: 341 TKEAFDTIQEQKVVLEENGEKN---QVQLGKLEATIKSLSAELLKANEI 386
>gi|21359945 chromosome condensation protein G [Homo sapiens]
Length = 1015
Score = 32.0 bits (71), Expect = 1.0
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query: 177 HLYNEDN------VDISEDTLSPITDVNEAVDVSDLNATEIKMPEVKVPEIKAEQ----- 225
H+ +DN +I + +PI V D +D+ E+KM E+KV I+A++
Sbjct: 450 HIIIDDNKRTQIVTEIISEIRAPIVTVGVNNDPADVRKKELKMAEIKVKLIEAKEALENC 509
Query: 226 ---QDVNVNPEITALQTMLAECQENLKKLT 252
QD N E+ L + + NL K T
Sbjct: 510 ITLQDFNRASELKEEIKALEDARINLLKET 539
>gi|154277120 spectrin repeat containing, nuclear envelope 1 isoform
3 [Homo sapiens]
Length = 982
Score = 32.0 bits (71), Expect = 1.0
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 20/135 (14%)
Query: 225 QQDVNVNPEITALQTMLAECQENLKKLTSIEKRLDCLEQKMKGKVMVDENTWTNLLSRVT 284
+Q + + E+ Q +A Q+ +L + DCLE K K V V N LL V+
Sbjct: 778 KQLMQIKHELLESQLRVASLQDMSCQLLVNAEGTDCLEAKEK--VHVIGNRLKLLLKEVS 835
Query: 285 LLETEMLLSKKNDEFIEFNEVSEDYASCSDMDLLNPHRKSEVERPASIPLSSGYSTASSD 344
E+ ++ ++ + +D +S S D E++ S+ +SG ST +
Sbjct: 836 RHIKEL------EKLLDVSSSQQDLSSWSSAD--------ELDTSGSVSPTSGRSTPNRQ 881
Query: 345 STPRASTVNYCGLNE 359
TPR C L++
Sbjct: 882 KTPRGK----CSLSQ 892
Score = 31.2 bits (69), Expect = 1.7
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 31/152 (20%)
Query: 215 EVKVPEIKAEQQDVNVN----PEITALQTMLAECQENLKKLTSIEKRLDCLE---QKMKG 267
+ K+ ++KA QQ++++N +I A L E E L IE+ LD L Q++ G
Sbjct: 305 QAKIKQLKAFQQEISLNHNKIEQIIAQGEQLIEKSEPL-DAAIIEEELDELRRYCQEVFG 363
Query: 268 KVMVDENTWTNLLSRVTLLETEMLLSKKNDEFIEFNEVSEDYASCSDM--------DLLN 319
+V + L R+ L + E LS + E ED A+ SD+ LL+
Sbjct: 364 RV----ERYHKKLIRLPLPDDEHDLSDRELEL-------EDSAALSDLHWHDRSADSLLS 412
Query: 320 PHRKSEVERPASIPLSSGYS----TASSDSTP 347
P S + + PL S S AS DS P
Sbjct: 413 PQPSSNLSLSLAQPLRSERSGRDTPASVDSIP 444
>gi|154277118 spectrin repeat containing, nuclear envelope 1 isoform 4
[Homo sapiens]
Length = 3321
Score = 32.0 bits (71), Expect = 1.0
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 20/135 (14%)
Query: 225 QQDVNVNPEITALQTMLAECQENLKKLTSIEKRLDCLEQKMKGKVMVDENTWTNLLSRVT 284
+Q + + E+ Q +A Q+ +L + DCLE K K V V N LL V+
Sbjct: 3117 KQLMQIKHELLESQLRVASLQDMSCQLLVNAEGTDCLEAKEK--VHVIGNRLKLLLKEVS 3174
Query: 285 LLETEMLLSKKNDEFIEFNEVSEDYASCSDMDLLNPHRKSEVERPASIPLSSGYSTASSD 344
E+ ++ ++ + +D +S S D E++ S+ +SG ST +
Sbjct: 3175 RHIKEL------EKLLDVSSSQQDLSSWSSAD--------ELDTSGSVSPTSGRSTPNRQ 3220
Query: 345 STPRASTVNYCGLNE 359
TPR C L++
Sbjct: 3221 KTPRGK----CSLSQ 3231
Score = 31.2 bits (69), Expect = 1.7
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 31/152 (20%)
Query: 215 EVKVPEIKAEQQDVNVN----PEITALQTMLAECQENLKKLTSIEKRLDCLE---QKMKG 267
+ K+ ++KA QQ++++N +I A L E E L IE+ LD L Q++ G
Sbjct: 2667 QAKIKQLKAFQQEISLNHNKIEQIIAQGEQLIEKSEPL-DAAIIEEELDELRRYCQEVFG 2725
Query: 268 KVMVDENTWTNLLSRVTLLETEMLLSKKNDEFIEFNEVSEDYASCSDM--------DLLN 319
+V + L R+ L + E LS + E ED A+ SD+ LL+
Sbjct: 2726 RV----ERYHKKLIRLPLPDDEHDLSDRELEL-------EDSAALSDLHWHDRSADSLLS 2774
Query: 320 PHRKSEVERPASIPLSSGYS----TASSDSTP 347
P S + + PL S S AS DS P
Sbjct: 2775 PQPSSNLSLSLAQPLRSERSGRDTPASVDSIP 2806
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 32.0 bits (71), Expect = 1.0
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 20/135 (14%)
Query: 225 QQDVNVNPEITALQTMLAECQENLKKLTSIEKRLDCLEQKMKGKVMVDENTWTNLLSRVT 284
+Q + + E+ Q +A Q+ +L + DCLE K K V V N LL V+
Sbjct: 8545 KQLMQIKHELLESQLRVASLQDMSCQLLVNAEGTDCLEAKEK--VHVIGNRLKLLLKEVS 8602
Query: 285 LLETEMLLSKKNDEFIEFNEVSEDYASCSDMDLLNPHRKSEVERPASIPLSSGYSTASSD 344
E+ ++ ++ + +D +S S D E++ S+ +SG ST +
Sbjct: 8603 RHIKEL------EKLLDVSSSQQDLSSWSSAD--------ELDTSGSVSPTSGRSTPNRQ 8648
Query: 345 STPRASTVNYCGLNE 359
TPR C L++
Sbjct: 8649 KTPRGK----CSLSQ 8659
Score = 31.2 bits (69), Expect = 1.7
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 31/152 (20%)
Query: 215 EVKVPEIKAEQQDVNVN----PEITALQTMLAECQENLKKLTSIEKRLDCLE---QKMKG 267
+ K+ ++KA QQ++++N +I A L E E L IE+ LD L Q++ G
Sbjct: 8072 QAKIKQLKAFQQEISLNHNKIEQIIAQGEQLIEKSEPL-DAAIIEEELDELRRYCQEVFG 8130
Query: 268 KVMVDENTWTNLLSRVTLLETEMLLSKKNDEFIEFNEVSEDYASCSDM--------DLLN 319
+V + L R+ L + E LS + E ED A+ SD+ LL+
Sbjct: 8131 RV----ERYHKKLIRLPLPDDEHDLSDRELEL-------EDSAALSDLHWHDRSADSLLS 8179
Query: 320 PHRKSEVERPASIPLSSGYS----TASSDSTP 347
P S + + PL S S AS DS P
Sbjct: 8180 PQPSSNLSLSLAQPLRSERSGRDTPASVDSIP 8211
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 32.0 bits (71), Expect = 1.0
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 20/135 (14%)
Query: 225 QQDVNVNPEITALQTMLAECQENLKKLTSIEKRLDCLEQKMKGKVMVDENTWTNLLSRVT 284
+Q + + E+ Q +A Q+ +L + DCLE K K V V N LL V+
Sbjct: 8593 KQLMQIKHELLESQLRVASLQDMSCQLLVNAEGTDCLEAKEK--VHVIGNRLKLLLKEVS 8650
Query: 285 LLETEMLLSKKNDEFIEFNEVSEDYASCSDMDLLNPHRKSEVERPASIPLSSGYSTASSD 344
E+ ++ ++ + +D +S S D E++ S+ +SG ST +
Sbjct: 8651 RHIKEL------EKLLDVSSSQQDLSSWSSAD--------ELDTSGSVSPTSGRSTPNRQ 8696
Query: 345 STPRASTVNYCGLNE 359
TPR C L++
Sbjct: 8697 KTPRGK----CSLSQ 8707
Score = 31.2 bits (69), Expect = 1.7
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 31/152 (20%)
Query: 215 EVKVPEIKAEQQDVNVN----PEITALQTMLAECQENLKKLTSIEKRLDCLE---QKMKG 267
+ K+ ++KA QQ++++N +I A L E E L IE+ LD L Q++ G
Sbjct: 8143 QAKIKQLKAFQQEISLNHNKIEQIIAQGEQLIEKSEPL-DAAIIEEELDELRRYCQEVFG 8201
Query: 268 KVMVDENTWTNLLSRVTLLETEMLLSKKNDEFIEFNEVSEDYASCSDM--------DLLN 319
+V + L R+ L + E LS + E ED A+ SD+ LL+
Sbjct: 8202 RV----ERYHKKLIRLPLPDDEHDLSDRELEL-------EDSAALSDLHWHDRSADSLLS 8250
Query: 320 PHRKSEVERPASIPLSSGYS----TASSDSTP 347
P S + + PL S S AS DS P
Sbjct: 8251 PQPSSNLSLSLAQPLRSERSGRDTPASVDSIP 8282
>gi|31581524 cordon-bleu homolog [Homo sapiens]
Length = 1261
Score = 32.0 bits (71), Expect = 1.0
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 316 DLLNPHRK-SEVERPASIPLSSGYSTASSDSTPRASTVNYCGLN 358
+++ PHRK S +RPA+I SS +S S R S CG +
Sbjct: 953 EVIGPHRKLSTQDRPAAIHRSSCFSLVQSSQRDRVSVGQSCGFS 996
>gi|40548422 chromatin modifying protein 4A [Homo sapiens]
Length = 265
Score = 31.6 bits (70), Expect = 1.3
Identities = 41/169 (24%), Positives = 81/169 (47%), Gaps = 19/169 (11%)
Query: 125 SLQKIPSQQRKKISSGKSEPPLGNEKISAEAVGVDISGRFMTSGKKKAV--VIRHLYNED 182
++QK+ ++ +KI K E +KI E + + ++ T K+ A+ + R E
Sbjct: 65 AIQKL--KETEKILIKKQE--FLEQKIQQE---LQTAKKYGTKNKRAALQALRRKKRFEQ 117
Query: 183 NVDISEDTLSPITDVNEAVDVSDLNATEIKMPEVKVPEIKAEQQDVNVNPEITALQTMLA 242
+ ++ TLS + EA++ + NA ++ E+ +K QD++++ ++ L T +
Sbjct: 118 QLAQTDGTLSTLEFQREAIENATTNAEVLRTMELAAQSMKKAYQDMDID-KVDELMTDIT 176
Query: 243 ECQENLKKLTSIEKRLDCLEQKMKGKVMVDENTWTNLLSRVTLLETEML 291
E QE ++++ D + + M VDE+ LL + LE E L
Sbjct: 177 EQQEVAQQIS------DAISRPMGFGDDVDED---ELLEELEELEQEEL 216
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 31.6 bits (70), Expect = 1.3
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 205 DLNATEIKMPEVKVPEIKAEQQDVNVNPEITALQTMLAECQENLKKLTSIEKRLDCLEQK 264
D++ E+ + +V+ + E + N++ E+TAL+ EN+ KLT +K L Q+
Sbjct: 957 DIDDLELTLTKVEKEKHATENKVKNLSEEMTALE-------ENISKLTKEKKSLQEAHQQ 1009
Query: 265 MKGKVMVDENTWTNLLSRVTLLETE 289
+ V+E+ L+ LE +
Sbjct: 1010 TLDDLQVEEDKVNGLIKINAKLEQQ 1034
>gi|42740899 CTAGE family, member 5 isoform 3 [Homo sapiens]
Length = 761
Score = 31.6 bits (70), Expect = 1.3
Identities = 17/73 (23%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 220 EIKAEQQDVNVNPEITALQTMLAECQENLKKLTSIEKRLDCLEQKM---KGKVMVDENTW 276
E+++ +D + E T Q++ A C++ + + +E + CLE+++ K K +
Sbjct: 107 EVESSLKDASFEKEATEAQSLEATCEKLNRSNSELEDEILCLEKELKEEKSKHSEQDELM 166
Query: 277 TNLLSRVTLLETE 289
++ R+ LE E
Sbjct: 167 ADISKRIQSLEDE 179
>gi|42740897 CTAGE family, member 5 isoform 1 [Homo sapiens]
Length = 804
Score = 31.6 bits (70), Expect = 1.3
Identities = 17/73 (23%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 220 EIKAEQQDVNVNPEITALQTMLAECQENLKKLTSIEKRLDCLEQKM---KGKVMVDENTW 276
E+++ +D + E T Q++ A C++ + + +E + CLE+++ K K +
Sbjct: 107 EVESSLKDASFEKEATEAQSLEATCEKLNRSNSELEDEILCLEKELKEEKSKHSEQDELM 166
Query: 277 TNLLSRVTLLETE 289
++ R+ LE E
Sbjct: 167 ADISKRIQSLEDE 179
>gi|42740901 CTAGE family, member 5 isoform 4 [Homo sapiens]
Length = 775
Score = 31.6 bits (70), Expect = 1.3
Identities = 17/73 (23%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 220 EIKAEQQDVNVNPEITALQTMLAECQENLKKLTSIEKRLDCLEQKM---KGKVMVDENTW 276
E+++ +D + E T Q++ A C++ + + +E + CLE+++ K K +
Sbjct: 78 EVESSLKDASFEKEATEAQSLEATCEKLNRSNSELEDEILCLEKELKEEKSKHSEQDELM 137
Query: 277 TNLLSRVTLLETE 289
++ R+ LE E
Sbjct: 138 ADISKRIQSLEDE 150
>gi|42740905 CTAGE family, member 5 isoform 2 [Homo sapiens]
Length = 792
Score = 31.6 bits (70), Expect = 1.3
Identities = 17/73 (23%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 220 EIKAEQQDVNVNPEITALQTMLAECQENLKKLTSIEKRLDCLEQKM---KGKVMVDENTW 276
E+++ +D + E T Q++ A C++ + + +E + CLE+++ K K +
Sbjct: 95 EVESSLKDASFEKEATEAQSLEATCEKLNRSNSELEDEILCLEKELKEEKSKHSEQDELM 154
Query: 277 TNLLSRVTLLETE 289
++ R+ LE E
Sbjct: 155 ADISKRIQSLEDE 167
>gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo
sapiens]
Length = 1150
Score = 30.8 bits (68), Expect = 2.3
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 8/130 (6%)
Query: 219 PEIKAEQQDVNVNPEITALQTMLAECQENLKKLTSIEKRLDCLEQK---MKGKVMVDENT 275
P +K E +DV N + + + L+KL EK +EQK ++ K DE T
Sbjct: 1009 PTVKQESKDVEENVGLIVYNGAMVDVGSLLQKLEKSEKVRAEVEQKLQLLEEKTDEDEKT 1068
Query: 276 WTNLLSRVTLLETEMLLSKKNDEFIEFNEVSEDYASCSDMDLLNPHRKSEVERPASIPLS 335
NL + L E+ KK + +++ E+ +M+L ++ ++ R S +
Sbjct: 1069 ILNLENSNKSLSGELREVKK-----DLSQLQENLKISENMNLQFENQMNKTIRNLSTVMD 1123
Query: 336 SGYSTASSDS 345
++ D+
Sbjct: 1124 EIHTVLKKDN 1133
>gi|50843820 sickle tail isoform 1 [Homo sapiens]
Length = 1943
Score = 30.8 bits (68), Expect = 2.3
Identities = 31/164 (18%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 116 VMKKHKELSSLQKIPSQQRKKISSGKSEPPLGNEKISAEAVGVDISGRFMTSGKKKAVVI 175
V+ + KE P++ + SS +E + I+ + + ++SG+ +V
Sbjct: 1348 VVLRPKEARHANVNPNEDGESSSSSPTEENAATDNIAFMITETTV--QVLSSGEVHDIVS 1405
Query: 176 RHLYNEDNVDISEDTLSPITDVNEAVDVSDLNATEIKMPEVKVPEIKAEQQDVNVNPEIT 235
+ ED ++ D +T E D D K P + + + + +++
Sbjct: 1406 QK--GEDIQTVNIDARKEMTPRQEGTDNEDPVVCLDKKPVIIIFD-----EPMDIRSAYK 1458
Query: 236 ALQTMLAECQENLKKLTSIEKRLDCLEQKMKGKVMVDENTWTNL 279
L T+ EC E L+++ +E++++ E++ G +V N + +
Sbjct: 1459 RLSTIFEECDEELERM-MMEEKIEEEEEEENGDSVVQNNNTSQM 1501
>gi|55770895 ERBB2 interacting protein isoform 7 [Homo sapiens]
Length = 1302
Score = 30.8 bits (68), Expect = 2.3
Identities = 65/292 (22%), Positives = 111/292 (38%), Gaps = 28/292 (9%)
Query: 111 DILNCVMKKHKELSSLQKIPSQQRKKISSGKSEPPLGNEKISAEAVGVDISGRFMTSGKK 170
DI V K E ++ K +R+K G S +KIS + +T+ K
Sbjct: 526 DINKDVGVKTSESTTTVKSKVDEREKYMIGNSV-----QKISEPEAEISPGSLPVTANMK 580
Query: 171 KAVVIRHLYNEDNVDISEDTLSPITDVNEAVDVSDLNATEIKMPEVKVPEIKAEQQDVNV 230
+ ++H+ N D+V + LS ++ A L T I P+V V ++ D
Sbjct: 581 ASENLKHIVNHDDVFEESEELSSDEEMKMAEMRPPLIETSINQPKV-VALSNNKKDDTKE 639
Query: 231 NPEITALQTMLAECQENLKKLTSIEKRLDCLEQKMKGKVMVDENTWTNLLSRVTLLETEM 290
++ + +N +S + D + + D + T+L S V +
Sbjct: 640 TDSLS--DEVTHNSNQNNSNCSSPSRMSDSV------SLNTDSSQDTSLCSPVKQTHID- 690
Query: 291 LLSKKNDEFIEFNEVSE--DYASCSDMDLLNPHRKSE---------VERPASIPLSSGYS 339
+ SK E FN + + D + S + H K + VE + S S
Sbjct: 691 INSKIRQEDENFNSLLQNGDILNSSTEEKFKAHDKKDFNLPEYDLNVEERLVLIEKSVDS 750
Query: 340 TASSDSTPRASTVNYCGLNEISENFPAWSATSSCSSLSWLLRGHTSYLSSQS 391
TA++D T + +N LN++ N S ++ G TS+LS S
Sbjct: 751 TATADDTHKLDHIN-MNLNKLITNDTFQPEIMERSKTQDIVLG-TSFLSINS 800
>gi|8923909 ERBB2 interacting protein isoform 2 [Homo sapiens]
Length = 1371
Score = 30.8 bits (68), Expect = 2.3
Identities = 65/292 (22%), Positives = 111/292 (38%), Gaps = 28/292 (9%)
Query: 111 DILNCVMKKHKELSSLQKIPSQQRKKISSGKSEPPLGNEKISAEAVGVDISGRFMTSGKK 170
DI V K E ++ K +R+K G S +KIS + +T+ K
Sbjct: 526 DINKDVGVKTSESTTTVKSKVDEREKYMIGNSV-----QKISEPEAEISPGSLPVTANMK 580
Query: 171 KAVVIRHLYNEDNVDISEDTLSPITDVNEAVDVSDLNATEIKMPEVKVPEIKAEQQDVNV 230
+ ++H+ N D+V + LS ++ A L T I P+V V ++ D
Sbjct: 581 ASENLKHIVNHDDVFEESEELSSDEEMKMAEMRPPLIETSINQPKV-VALSNNKKDDTKE 639
Query: 231 NPEITALQTMLAECQENLKKLTSIEKRLDCLEQKMKGKVMVDENTWTNLLSRVTLLETEM 290
++ + +N +S + D + + D + T+L S V +
Sbjct: 640 TDSLS--DEVTHNSNQNNSNCSSPSRMSDSV------SLNTDSSQDTSLCSPVKQTHID- 690
Query: 291 LLSKKNDEFIEFNEVSE--DYASCSDMDLLNPHRKSE---------VERPASIPLSSGYS 339
+ SK E FN + + D + S + H K + VE + S S
Sbjct: 691 INSKIRQEDENFNSLLQNGDILNSSTEEKFKAHDKKDFNLPEYDLNVEERLVLIEKSVDS 750
Query: 340 TASSDSTPRASTVNYCGLNEISENFPAWSATSSCSSLSWLLRGHTSYLSSQS 391
TA++D T + +N LN++ N S ++ G TS+LS S
Sbjct: 751 TATADDTHKLDHIN-MNLNKLITNDTFQPEIMERSKTQDIVLG-TSFLSINS 800
>gi|148229134 ring finger and KH domain containing 2 [Homo sapiens]
Length = 659
Score = 30.8 bits (68), Expect = 2.3
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 287 ETEMLLSKKNDEFIEFNEVSEDYASCSDMD-----LLNPHRKSEVERPASIPLSSGYSTA 341
E EM ++ + +IE NE ++ + + +D+ L + S P+ + S Y
Sbjct: 386 EIEMHIAMRTGNYIELNEENDFHYNGTDVSFEGGTLGSAWLSSNPVPPSRARMISNYRND 445
Query: 342 SSDSTPRASTVNYCGLNEISENFP 365
SS S ST +Y G N +++ P
Sbjct: 446 SSSSLGSGSTDSYFGSNRLADFSP 469
>gi|44681484 cell division cycle associated 2 [Homo sapiens]
Length = 1023
Score = 30.8 bits (68), Expect = 2.3
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 24/131 (18%)
Query: 109 VCDILNCVMKKHKELSSLQKIPSQQRKKISSGKSEPPLGNEKISAEAVGVDISGRFMTSG 168
VC++LN ++ KE KKI+ KS+ ++ + V S R G
Sbjct: 521 VCNLLNTEVQPCKE------------KKINRRKSQETKCTKRALPKKSQVLKSCR-KKKG 567
Query: 169 KKKAVVIRHLYNEDNVDISEDTLSPITDVNEAVDV-----------SDLNATEIKMPEVK 217
K K V + LY E ++ + LSPI ++ E ++ S ++ K+ EVK
Sbjct: 568 KGKKSVQKSLYGERDIASKKPLLSPIPELPEVPEMTPSIPSIRRLGSGYFSSNGKLEEVK 627
Query: 218 VPEIKAEQQDV 228
P+ +++D+
Sbjct: 628 TPKNPVKRKDL 638
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.129 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,386,852
Number of Sequences: 37866
Number of extensions: 597819
Number of successful extensions: 1829
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 1740
Number of HSP's gapped (non-prelim): 136
length of query: 399
length of database: 18,247,518
effective HSP length: 104
effective length of query: 295
effective length of database: 14,309,454
effective search space: 4221288930
effective search space used: 4221288930
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.