Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ALDH16A1 Sequence: fasta or formatted (802aa) NCBI GI: 223972651
Description:

aldehyde dehydrogenase 16 family, member A1 isoform 1

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Other entries for this name:
alt prot [751aa] aldehyde dehydrogenase 16 family, member A1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.2        114           3
 C cysteine            2.2         18           1
 D aspartate           3.5         28           1
 E glutamate           6.0         48           2
 F phenylalanine       2.2         18           1
 G glycine            10.2         82           2
 H histidine           1.9         15           1
 I isoleucine          1.9         15           1
 K lysine              1.6         13           1
 L leucine            12.1         97           4
 M methionine          1.5         12           2
 N asparagine          1.6         13           1
 P proline             7.6         61           2
 Q glutamine           4.6         37           2
 R arginine            7.2         58           2
 S serine              6.0         48           2
 T threonine           3.5         28           1
 V valine              8.0         64           3
 W tryptophan          2.6         21           1
 Y tyrosine            1.5         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aldehyde dehydrogenase 16 family, member A1 isoform... 
ALDH16A1              0.909   aldehyde dehydrogenase 16 family, member A1 isoform...
ALDH1A2               0.098   aldehyde dehydrogenase 1A2 isoform 1 
ALDH1B1               0.094   aldehyde dehydrogenase 1B1 precursor 
ALDH2                 0.094   mitochondrial aldehyde dehydrogenase 2 precursor [Ho...
ALDH1A1               0.094   aldehyde dehydrogenase 1A1 
ALDH8A1               0.091   aldehyde dehydrogenase 8A1 isoform 1 
ALDH1L1               0.091   aldehyde dehydrogenase 1 family, member L1 
ALDH1A3               0.086   aldehyde dehydrogenase 1A3 
ALDH9A1               0.083   aldehyde dehydrogenase 9A1 
ALDH1L2               0.081   aldehyde dehydrogenase 1 family, member L2 
ALDH1A2               0.079   aldehyde dehydrogenase 1A2 isoform 3 
ALDH1A2               0.077   aldehyde dehydrogenase 1A2 isoform 2 
ALDH5A1               0.076   aldehyde dehydrogenase 5A1 isoform 2 precursor 
ALDH8A1               0.071   aldehyde dehydrogenase 8A1 isoform 2 
ALDH5A1               0.070   aldehyde dehydrogenase 5A1 isoform 1 precursor [Homo...
ALDH6A1               0.050   aldehyde dehydrogenase 6A1 precursor 
ALDH7A1               0.047   aldehyde dehydrogenase 7 family, member A1 
ALDH4A1               0.024   aldehyde dehydrogenase 4A1 isoform a precursor [Homo...
ALDH4A1               0.024   aldehyde dehydrogenase 4A1 isoform b 
ALDH4A1               0.024   aldehyde dehydrogenase 4A1 isoform a precursor [Homo...
ALDH3B1               0.016   aldehyde dehydrogenase 3B1 isoform a 
ALDH3B1               0.016   aldehyde dehydrogenase 3B1 isoform a 
ALDH3A1               0.013   aldehyde dehydrogenase 3A1 
ALDH3A1               0.013   aldehyde dehydrogenase 3A1 
ALDH3A1               0.013   aldehyde dehydrogenase 3A1 
MLLT6                 0.010   myeloid/lymphoid or mixed-lineage leukemia (trithora...
ALDH3A2               0.008   aldehyde dehydrogenase 3A2 isoform 2 
ALDH3A2               0.008   aldehyde dehydrogenase 3A2 isoform 1 
ALDH3B1               0.008   aldehyde dehydrogenase 3B1 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press