Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: IKBKG Sequence: fasta or formatted (487aa) NCBI GI: 223671870
Description:

inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma isoform b

Referenced in:

NF-kappaB Pathway

Other entries for this name:
alt prot [419aa] inhibitor of kappa light polypeptide gene enhancer in B-cells, ki...
alt prot [320aa] inhibitor of kappa light polypeptide gene enhancer in B-cells, ki...
alt prot [419aa] inhibitor of kappa light polypeptide gene enhancer in B-cells, ki...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         46           2
 C cysteine            2.9         14           2
 D aspartate           3.1         15           1
 E glutamate          12.5         61           2
 F phenylalanine       1.6          8           1
 G glycine             3.1         15           2
 H histidine           2.1         10           1
 I isoleucine          2.7         13           2
 K lysine              7.0         34           2
 L leucine            11.5         56           2
 M methionine          2.7         13           1
 N asparagine          1.0          5           1
 P proline             5.5         27           2
 Q glutamine          11.5         56           3
 R arginine            7.8         38           2
 S serine              6.6         32           2
 T threonine           1.6          8           1
 V valine              5.3         26           2
 W tryptophan          0.6          3           1
 Y tyrosine            1.4          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   inhibitor of kappa light polypeptide gene enhancer ... 
IKBKG                 0.851   inhibitor of kappa light polypeptide gene enhancer in...
IKBKG                 0.851   inhibitor of kappa light polypeptide gene enhancer ...
IKBKG                 0.361   inhibitor of kappa light polypeptide gene enhancer ...
OPTN                  0.125   optineurin 
OPTN                  0.125   optineurin 
OPTN                  0.125   optineurin 
OPTN                  0.125   optineurin 
PLEC1                 0.062   plectin 1 isoform 11 
PLEC1                 0.062   plectin 1 isoform 10 
PLEC1                 0.062   plectin 1 isoform 8 
PLEC1                 0.062   plectin 1 isoform 7 
PLEC1                 0.062   plectin 1 isoform 6 
PLEC1                 0.062   plectin 1 isoform 3 
PLEC1                 0.062   plectin 1 isoform 2 
PLEC1                 0.062   plectin 1 isoform 1 
CEP164                0.058   centrosomal protein 164kDa 
NUMA1                 0.054   nuclear mitotic apparatus protein 1 
EEA1                  0.054   early endosome antigen 1, 162kD 
MYH9                  0.053   myosin, heavy polypeptide 9, non-muscle 
LRRC45                0.051   leucine rich repeat containing 45 
CEP250                0.050   centrosomal protein 2 
CCDC136               0.050   coiled-coil domain containing 136 
LOC100133758          0.049   PREDICTED: hypothetical protein, partial 
LOC283767             0.048   golgi autoantigen, golgin subfamily a-like 
DSP                   0.048   desmoplakin isoform I 
MYH10                 0.048   myosin, heavy polypeptide 10, non-muscle 
MYH13                 0.048   myosin, heavy polypeptide 13, skeletal muscle [Homo...
MYH11                 0.048   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.048   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press