Guide to the Human Genome
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Name: FAM190A Sequence: fasta or formatted (900aa) NCBI GI: 222831647
Description:

KIAA1680 protein isoform 1

Referenced in:

Cerebellum
Gene Structure

Other entries for this name:
alt prot [677aa] KIAA1680 protein isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         41           2
 C cysteine            1.6         14           1
 D aspartate           4.4         40           2
 E glutamate           7.8         70           2
 F phenylalanine       3.1         28           1
 G glycine             5.2         47           2
 H histidine           3.2         29           2
 I isoleucine          3.3         30           2
 K lysine              6.4         58           2
 L leucine             9.7         87           3
 M methionine          2.2         20           1
 N asparagine          4.2         38           2
 P proline             5.3         48           2
 Q glutamine           4.9         44           2
 R arginine            6.0         54           2
 S serine             14.9        134           4
 T threonine           7.0         63           3
 V valine              4.7         42           2
 W tryptophan          0.1          1           1
 Y tyrosine            1.3         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   KIAA1680 protein isoform 1 
FAM190A               0.739   KIAA1680 protein isoform 2 
FAM190B               0.038   granule cell antiserum positive 14 
DSPP                  0.013   dentin sialophosphoprotein preproprotein 
SFRS4                 0.011   splicing factor, arginine/serine-rich 4 
MUC3A                 0.011   PREDICTED: mucin 3A, cell surface associated, parti...
FLG                   0.010   filaggrin 
MLLT3                 0.010   myeloid/lymphoid or mixed-lineage leukemia (trithor...
CIR1                  0.009   CBF1 interacting corepressor 
PNN                   0.009   pinin, desmosome associated protein 
SRRM2                 0.009   splicing coactivator subunit SRm300 
LOC100133408          0.008   PREDICTED: similar to mucin 
TPR                   0.008   nuclear pore complex-associated protein TPR 
CRKRS                 0.008   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.008   Cdc2-related kinase, arginine/serine-rich isoform 1...
GPATCH8               0.007   G patch domain containing 8 
CDSN                  0.007   corneodesmosin precursor 
PTPN12                0.007   protein tyrosine phosphatase, non-receptor type 12 ...
PTPN12                0.007   protein tyrosine phosphatase, non-receptor type 12 ...
PTPN12                0.007   protein tyrosine phosphatase, non-receptor type 12 ...
GPR112                0.007   G-protein coupled receptor 112 
SETD1A                0.007   SET domain containing 1A 
AIM1                  0.007   absent in melanoma 1 
SNIP1                 0.007   Smad nuclear interacting protein 
UBAP2L                0.007   ubiquitin associated protein 2-like isoform a [Homo...
UBAP2L                0.007   ubiquitin associated protein 2-like isoform b [Homo...
CYTSB                 0.007   spectrin domain with coiled-coils 1 NSP5a3b 
CYTSB                 0.007   spectrin domain with coiled-coils 1 NSP5a3a 
ANKHD1                0.007   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.007   ANKHD1-EIF4EBP3 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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