Guide to the Human Genome
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Name: NFKBIL1 Sequence: fasta or formatted (343aa) NCBI GI: 222352179
Description:

nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 isoform 4

Not currently referenced in the text

Other entries for this name:
alt prot {381aa} nuclear factor of kappa light polypeptide gene enhancer in B-cell...
alt prot {366aa} nuclear factor of kappa light polypeptide gene enhancer in B-cell...
alt prot {358aa} nuclear factor of kappa light polypeptide gene enhancer in B-cell...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.5         43           3
 C cysteine            1.5          5           1
 D aspartate           5.2         18           2
 E glutamate           9.9         34           5
 F phenylalanine       2.3          8           2
 G glycine             7.9         27           3
 H histidine           3.2         11           1
 I isoleucine          0.9          3           1
 K lysine              2.3          8           1
 L leucine             9.0         31           3
 M methionine          1.2          4           1
 N asparagine          0.6          2           1
 P proline             7.6         26           3
 Q glutamine           7.6         26           4
 R arginine           14.6         50           2
 S serine              5.5         19           2
 T threonine           2.3          8           1
 V valine              2.3          8           1
 W tryptophan          2.6          9           1
 Y tyrosine            0.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear factor of kappa light polypeptide gene enha... 
NFKBIL1               1.000   nuclear factor of kappa light polypeptide gene enha...
NFKBIL1               0.985   nuclear factor of kappa light polypeptide gene enha...
NFKBIL1               0.985   nuclear factor of kappa light polypeptide gene enha...
TCHH                  0.035   trichohyalin 
MAP7                  0.035   microtubule-associated protein 7 
TNIK                  0.034   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.034   TRAF2 and NCK interacting kinase isoform 7 
TNIK                  0.034   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.034   TRAF2 and NCK interacting kinase isoform 3 
NFKB2                 0.032   nuclear factor of kappa light polypeptide gene enha...
NFKB2                 0.032   nuclear factor of kappa light polypeptide gene enha...
NFKB2                 0.032   nuclear factor of kappa light polypeptide gene enha...
TNIK                  0.032   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.032   TRAF2 and NCK interacting kinase isoform 5 
TNIK                  0.032   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.032   TRAF2 and NCK interacting kinase isoform 1 
BAT2D1                0.032   HBxAg transactivated protein 2 
LOC100288837          0.032   PREDICTED: hypothetical protein XP_002343931, parti...
EIF3A                 0.031   eukaryotic translation initiation factor 3, subunit 1...
LOC100286959          0.029   PREDICTED: hypothetical protein XP_002343921 
CALD1                 0.029   caldesmon 1 isoform 1 
INCENP                0.029   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.029   inner centromere protein antigens 135/155kDa isofor...
LOC400352             0.029   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.029   PREDICTED: similar to Putative golgin subfamily A m...
PPP1R12B              0.028   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R12B              0.028   protein phosphatase 1, regulatory (inhibitor) subunit...
LOC100133599          0.028   PREDICTED: hypothetical protein 
LOC100133599          0.028   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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