Guide to the Human Genome
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Name: NEU2 Sequence: fasta or formatted (380aa) NCBI GI: 222352170
Description:

neuraminidase 2

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         39           2
 C cysteine            2.1          8           1
 D aspartate           4.5         17           1
 E glutamate           5.0         19           2
 F phenylalanine       3.9         15           2
 G glycine             6.3         24           1
 H histidine           3.7         14           1
 I isoleucine          2.4          9           1
 K lysine              2.1          8           2
 L leucine            10.3         39           2
 M methionine          1.1          4           1
 N asparagine          1.6          6           1
 P proline             8.2         31           3
 Q glutamine           8.7         33           3
 R arginine            6.3         24           2
 S serine              7.1         27           2
 T threonine           5.3         20           1
 V valine              6.1         23           2
 W tryptophan          1.8          7           1
 Y tyrosine            3.4         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neuraminidase 2 
NEU3                  0.307   sialidase 3 
NEU4                  0.267   sialidase 4 
NEU1                  0.050   neuraminidase precursor 
COL11A1               0.013   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.013   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.013   alpha 1 type XI collagen isoform A preproprotein [Ho...
ATXN2L                0.013   ataxin 2 related protein isoform B 
ATXN2L                0.013   ataxin 2 related protein isoform E 
ATXN2L                0.013   ataxin 2 related protein isoform C 
ATXN2L                0.013   ataxin 2 related protein isoform A 
ATXN2L                0.013   ataxin 2 related protein isoform D 
PTPN23                0.011   protein tyrosine phosphatase, non-receptor type 23 [...
COL11A2               0.011   collagen, type XI, alpha 2 isoform 2 preproprotein ...
COL11A2               0.011   collagen, type XI, alpha 2 isoform 3 preproprotein ...
COL11A2               0.011   collagen, type XI, alpha 2 isoform 1 preproprotein ...
CDH15                 0.009   cadherin 15 preproprotein 
COL5A1                0.008   alpha 1 type V collagen preproprotein 
COL13A1               0.008   alpha 1 type XIII collagen isoform 18 
CD19                  0.007   CD19 antigen 
NOTCH2                0.007   notch 2 preproprotein 
SGIP1                 0.007   SH3-domain GRB2-like (endophilin) interacting prote...
SMCR7                 0.007   Smith-Magenis syndrome chromosome region, candidate...
POM121L2              0.005   POM121 membrane glycoprotein-like 2 
LOC100131180          0.005   PREDICTED: hypothetical protein 
LOC100131180          0.005   PREDICTED: hypothetical protein 
LOC100131180          0.005   PREDICTED: hypothetical protein 
CAMKK1                0.005   calcium/calmodulin-dependent protein kinase 1 alpha ...
CAMKK1                0.005   calcium/calmodulin-dependent protein kinase 1 alpha...
CAMKK1                0.005   calcium/calmodulin-dependent protein kinase 1 alpha ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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