Guide to the Human Genome
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Name: TTC26 Sequence: fasta or formatted (554aa) NCBI GI: 222136634
Description:

tetratricopeptide repeat domain 26 isoform 1

Referenced in:

Tetratricopeptide Domains

Other entries for this name:
alt prot [487aa] tetratricopeptide repeat domain 26 isoform 2
alt prot [523aa] tetratricopeptide repeat domain 26 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         45           2
 C cysteine            2.0         11           1
 D aspartate           4.9         27           2
 E glutamate           8.1         45           4
 F phenylalanine       4.9         27           2
 G glycine             5.1         28           2
 H histidine           2.2         12           1
 I isoleucine          5.1         28           2
 K lysine              7.2         40           3
 L leucine            11.7         65           2
 M methionine          2.9         16           2
 N asparagine          5.2         29           1
 P proline             2.3         13           2
 Q glutamine           4.7         26           2
 R arginine            5.2         29           1
 S serine              5.4         30           3
 T threonine           3.1         17           2
 V valine              4.9         27           2
 W tryptophan          1.1          6           1
 Y tyrosine            6.0         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tetratricopeptide repeat domain 26 isoform 1 
TTC26                 0.923   tetratricopeptide repeat domain 26 isoform 3 
TTC26                 0.849   tetratricopeptide repeat domain 26 isoform 2 
BBS4                  0.016   Bardet-Biedl syndrome 4 
STIP1                 0.008   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
PDCD11                0.008   programmed cell death 11 
ID1                   0.007   inhibitor of DNA binding 1 isoform a 
ID1                   0.007   inhibitor of DNA binding 1 isoform b 
TELO2                 0.006   TEL2, telomere maintenance 2, homolog 
TTC7B                 0.006   tetratricopeptide repeat domain 7B 
TTC18                 0.006   tetratricopeptide repeat domain 18 
MRC1                  0.006   mannose receptor C type 1 precursor 
TTC8                  0.006   tetratricopeptide repeat domain 8 isoform A 
TTC8                  0.006   tetratricopeptide repeat domain 8 isoform C 
TTC8                  0.006   tetratricopeptide repeat domain 8 isoform B 
MRC1L1                0.006   mannose receptor, C type 1-like 1 
TTC21B                0.006   tetratricopeptide repeat domain 21B 
TTC37                 0.005   tetratricopeptide repeat domain 37 
TTC6                  0.005   PREDICTED: tetratricopeptide repeat domain 6 
TTC34                 0.005   PREDICTED: tetratricopeptide repeat domain 34 [Homo...
TTC6                  0.005   PREDICTED: tetratricopeptide repeat domain 6 
TTC34                 0.005   PREDICTED: tetratricopeptide repeat domain 34 [Homo...
C14orf25              0.005   PREDICTED: chromosome 14 open reading frame 25 [Hom...
SPAG1                 0.005   sperm associated antigen 1 
SPAG1                 0.005   sperm associated antigen 1 
XPNPEP3               0.005   X-prolyl aminopeptidase (aminopeptidase P) 3, putati...
IFT88                 0.005   intraflagellar transport 88 homolog isoform 1 
IFT88                 0.005   intraflagellar transport 88 homolog isoform 2 
TOMM34                0.005   translocase of outer mitochondrial membrane 34 [Homo...
TTC22                 0.005   tetratricopeptide repeat domain 22 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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