Guide to the Human Genome
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Name: C6orf105 Sequence: fasta or formatted (248aa) NCBI GI: 221139836
Description:

hypothetical protein LOC84830 isoform 1

Referenced in:

Additional Signal Responses

Other entries for this name:
alt prot [230aa] hypothetical protein LOC84830 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         16           3
 C cysteine            0.8          2           1
 D aspartate           3.6          9           2
 E glutamate           2.0          5           1
 F phenylalanine       8.1         20           2
 G glycine             4.8         12           2
 H histidine           2.0          5           1
 I isoleucine          6.5         16           1
 K lysine              7.7         19           2
 L leucine            14.9         37           2
 M methionine          1.6          4           1
 N asparagine          2.8          7           1
 P proline             4.0         10           1
 Q glutamine           2.0          5           1
 R arginine            4.4         11           1
 S serine              5.2         13           1
 T threonine           8.1         20           2
 V valine              5.6         14           2
 W tryptophan          3.2          8           1
 Y tyrosine            6.0         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC84830 isoform 1 
C6orf105              0.901   hypothetical protein LOC84830 isoform 2 
AIG1                  0.258   androgen-induced 1 
TMEM50B               0.021   transmembrane protein 50B 
SLC47A1               0.014   solute carrier family 47, member 1 
C6orf103              0.012   hypothetical protein LOC79747 
SLC15A2               0.008   peptide transporter 2 isoform a 
GUCY2C                0.006   guanylate cyclase 2C 
GABRG2                0.006   gamma-aminobutyric acid A receptor, gamma 2 isoform...
GABRG2                0.006   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
GABRG2                0.006   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
ZNF644                0.006   zinc finger protein 644 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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