Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: HIPK3 Sequence: fasta or formatted (1194aa) NCBI GI: 114796630
Description:

homeodomain interacting protein kinase 3 isoform 2

Referenced in:

Dual-Specificity Protein Kinases
Homeobox and Related Proteins
Nuclear Receptors

Other entries for this name:
alt prot [1215aa] homeodomain interacting protein kinase 3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         79           2
 C cysteine            2.6         31           2
 D aspartate           3.8         45           2
 E glutamate           4.7         56           3
 F phenylalanine       3.1         37           2
 G glycine             5.3         63           2
 H histidine           4.0         48           2
 I isoleucine          4.8         57           3
 K lysine              4.4         53           2
 L leucine             8.5        101           2
 M methionine          1.8         22           1
 N asparagine          5.0         60           2
 P proline             7.0         84           2
 Q glutamine           6.6         79           3
 R arginine            4.0         48           2
 S serine             10.5        125           3
 T threonine           7.5         90           3
 V valine              6.4         77           3
 W tryptophan          0.8         10           1
 Y tyrosine            2.4         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   homeodomain interacting protein kinase 3 isoform 2 ... 
HIPK3                 0.995   homeodomain interacting protein kinase 3 isoform 1 ...
HIPK2                 0.451   homeodomain interacting protein kinase 2 isoform 2 ...
HIPK2                 0.446   homeodomain interacting protein kinase 2 isoform 1 ...
HIPK1                 0.389   homeodomain-interacting protein kinase 1 isoform 1 [...
HIPK1                 0.350   homeodomain-interacting protein kinase 1 isoform 2 [...
HIPK1                 0.201   homeodomain-interacting protein kinase 1 isoform 3 [...
HIPK1                 0.179   homeodomain-interacting protein kinase 1 isoform 4 [...
LOC653052             0.171   PREDICTED: similar to homeodomain interacting prote...
HIPK4                 0.124   homeodomain interacting protein kinase 4 
LOC653052             0.085   PREDICTED: similar to homeodomain interacting prote...
DYRK1A                0.079   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.079   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.079   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.079   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.079   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1B                0.076   dual-specificity tyrosine-(Y)-phosphorylation regulat...
DYRK1B                0.075   dual-specificity tyrosine-(Y)-phosphorylation regulat...
DYRK1B                0.075   dual-specificity tyrosine-(Y)-phosphorylation regulat...
DYRK4                 0.075   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK2                 0.073   dual-specificity tyrosine-(Y)-phosphorylation regul...
DYRK2                 0.073   dual-specificity tyrosine-(Y)-phosphorylation regulat...
DYRK3                 0.068   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK3                 0.068   dual-specificity tyrosine-(Y)-phosphorylation regula...
PRPF4B                0.061   serine/threonine-protein kinase PRP4K 
CLK1                  0.057   CDC-like kinase 1 isoform 2 
CLK1                  0.057   CDC-like kinase 1 isoform 1 
CLK4                  0.055   CDC-like kinase 4 
CLK2                  0.053   CDC-like kinase 2 
CLK3                  0.049   CDC-like kinase 3 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press