Guide to the Human Genome
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Name: CLP1 Sequence: fasta or formatted (361aa) NCBI GI: 217272859
Description:

ATP/GTP-binding protein isoform 2

Referenced in:

Polyadenylation

Other entries for this name:
alt prot [425aa] ATP/GTP-binding protein isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         21           2
 C cysteine            2.2          8           1
 D aspartate           5.0         18           2
 E glutamate           8.6         31           3
 F phenylalanine       5.3         19           1
 G glycine             6.1         22           2
 H histidine           2.2          8           2
 I isoleucine          2.5          9           1
 K lysine              5.3         19           2
 L leucine             9.7         35           3
 M methionine          2.5          9           1
 N asparagine          3.3         12           1
 P proline             4.4         16           1
 Q glutamine           3.0         11           1
 R arginine            7.2         26           2
 S serine              6.1         22           1
 T threonine           6.6         24           2
 V valine             11.1         40           4
 W tryptophan          0.6          2           1
 Y tyrosine            2.5          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATP/GTP-binding protein isoform 2 
CLP1                  0.615   ATP/GTP-binding protein isoform 1 
NOL9                  0.014   nucleolar protein 9 
SEPT9                 0.011   septin 9 isoform f 
SEPT9                 0.011   septin 9 isoform d 
SEPT9                 0.011   septin 9 isoform e 
SEPT9                 0.011   septin 9 isoform b 
SEPT9                 0.011   septin 9 isoform e 
SEPT9                 0.011   septin 9 isoform a 
SEPT9                 0.011   septin 9 isoform c 
SEPT3                 0.010   septin 3 isoform A 
SEPT3                 0.010   septin 3 isoform B 
PAX2                  0.006   paired box protein 2 isoform d 
PAX2                  0.006   paired box protein 2 isoform b 
PAX2                  0.006   paired box protein 2 isoform a 
PAX2                  0.006   paired box protein 2 isoform c 
PAX2                  0.006   paired box protein 2 isoform e 
C6orf103              0.006   hypothetical protein LOC79747 
DNAH14                0.004   dynein, axonemal, heavy polypeptide 14 isoform 1 [H...
ICOSLG                0.004   inducible T-cell co-stimulator ligand 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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