C7orf38 13283

Name: C7orf38	Sequence: fasta or formatted (573aa)		NCBI GI: 21495178
Description: hypothetical protein LOC221786		Referenced in: DNA Transposon and Retrovirus-related Sequences
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.4 25 2 C cysteine 2.1 12 2 D aspartate 4.9 28 2 E glutamate 8.6 49 3 F phenylalanine 4.4 25 1 G glycine 2.8 16 2 H histidine 3.1 18 1 I isoleucine 7.2 41 2 K lysine 6.8 39 2 L leucine 14.1 81 4 M methionine 2.4 14 1 N asparagine 5.6 32 2 P proline 3.1 18 1 Q glutamine 3.1 18 1 R arginine 4.4 25 2 S serine 8.4 48 3 T threonine 5.9 34 3 V valine 4.4 25 1 W tryptophan 1.6 9 1 Y tyrosine 2.8 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC221786 LOC285550 0.760 hypothetical protein LOC285550 ZMYM6 0.313 zinc finger protein 258 SCAND3 0.306 SCAN domain containing 3 ZBED5 0.276 zinc finger, BED-type containing 5 ZBED5 0.276 zinc finger, BED-type containing 5 C5orf54 0.236 transposon-derived Buster3 transposase-like GTF2IRD2B 0.100 GTF2I repeat domain containing 2B GTF2IRD2 0.098 GTF2I repeat domain containing 2 EPM2AIP1 0.073 EPM2A interacting protein 1 ZKSCAN1 0.028 zinc finger protein 36 ZMYM1 0.014 zinc finger, MYM domain containing 1 KIAA1586 0.009 hypothetical protein LOC57691 ZNF862 0.007 zinc finger protein 862 ZKSCAN5 0.006 zinc finger with KRAB and SCAN domains 5 ZKSCAN5 0.006 zinc finger with KRAB and SCAN domains 5 PRPF40A 0.005 formin binding protein 3 AKAP9 0.005 A-kinase anchor protein 9 isoform 2 AKAP9 0.005 A-kinase anchor protein 9 isoform 3 C7orf58 0.004 hypothetical protein LOC79974 isoform 2 C7orf58 0.004 hypothetical protein LOC79974 isoform 1 TBC1D2B 0.004 TBC1 domain family, member 2B isoform b GTF2H1 0.004 general transcription factor IIH, polypeptide 1, 62... GTF2H1 0.004 general transcription factor IIH, polypeptide 1, 62kD... SETD1B 0.004 SET domain containing 1B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.