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Search of human proteins with 214010234
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|214010234 mahogunin, ring finger 1 isoform 2 [Homo sapiens]
(555 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|214010234 mahogunin, ring finger 1 isoform 2 [Homo sapiens] 1123 0.0
gi|44917608 mahogunin, ring finger 1 isoform 1 [Homo sapiens] 1104 0.0
gi|214010238 mahogunin, ring finger 1 isoform 4 [Homo sapiens] 1045 0.0
gi|214010236 mahogunin, ring finger 1 isoform 3 [Homo sapiens] 1026 0.0
gi|58743365 ring finger protein 157 [Homo sapiens] 571 e-163
gi|14042925 ring finger protein 26 [Homo sapiens] 55 1e-07
gi|217416388 neuralized homolog 1B [Homo sapiens] 53 6e-07
gi|171542821 mitochondrial ubiquitin ligase activator of NFKB 1 ... 51 2e-06
gi|5729765 cell growth regulator with ring finger domain 1 [Homo... 50 7e-06
gi|223278368 neuralized-like [Homo sapiens] 49 2e-05
gi|38348336 inter-alpha (globulin) inhibitor H5-like [Homo sapiens] 44 3e-04
gi|53729363 leucine rich repeat and sterile alpha motif containi... 44 4e-04
gi|53729361 leucine rich repeat and sterile alpha motif containi... 44 4e-04
gi|53729359 leucine rich repeat and sterile alpha motif containi... 44 4e-04
gi|21314764 Fc receptor-like 3 precursor [Homo sapiens] 43 7e-04
gi|21361493 ring finger protein 141 [Homo sapiens] 43 7e-04
gi|62865649 rififylin [Homo sapiens] 43 9e-04
gi|17432433 rififylin [Homo sapiens] 43 9e-04
gi|89993691 mouse double minute 2 homolog isoform MDM2e [Homo sa... 42 0.001
gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens] 42 0.001
gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens] 42 0.001
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 42 0.001
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 42 0.001
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 42 0.001
gi|58530863 melanoma antigen family A, 10 [Homo sapiens] 42 0.001
gi|10567820 melanoma antigen family A, 10 [Homo sapiens] 42 0.001
gi|57165361 ring finger protein 165 [Homo sapiens] 42 0.001
gi|66529407 tensin [Homo sapiens] 42 0.002
gi|21040269 ring finger protein 133 [Homo sapiens] 41 0.003
gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo sap... 40 0.004
>gi|214010234 mahogunin, ring finger 1 isoform 2 [Homo sapiens]
Length = 555
Score = 1123 bits (2905), Expect = 0.0
Identities = 555/555 (100%), Positives = 555/555 (100%)
Query: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
Sbjct: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60
Query: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120
NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
Sbjct: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120
Query: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180
EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
Sbjct: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180
Query: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDAVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 240
SEWKDDELNFDLDRGVFPVVIQAVVDEGDAVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ
Sbjct: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDAVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 240
Query: 241 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 300
KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC
Sbjct: 241 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 300
Query: 301 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSNSDS 360
TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSNSDS
Sbjct: 301 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSNSDS 360
Query: 361 VPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDHILDSSR 420
VPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDHILDSSR
Sbjct: 361 VPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDHILDSSR 420
Query: 421 QKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLGGAELALRESSSPESFITEEV 480
QKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLGGAELALRESSSPESFITEEV
Sbjct: 421 QKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLGGAELALRESSSPESFITEEV 480
Query: 481 DESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPGRPTSMETAHGLATTSPTWPPL 540
DESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPGRPTSMETAHGLATTSPTWPPL
Sbjct: 481 DESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPGRPTSMETAHGLATTSPTWPPL 540
Query: 541 GGPSPDPSAAELTPL 555
GGPSPDPSAAELTPL
Sbjct: 541 GGPSPDPSAAELTPL 555
>gi|44917608 mahogunin, ring finger 1 isoform 1 [Homo sapiens]
Length = 576
Score = 1104 bits (2856), Expect = 0.0
Identities = 554/577 (96%), Positives = 554/577 (96%), Gaps = 23/577 (3%)
Query: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
Sbjct: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60
Query: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120
NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
Sbjct: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120
Query: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180
EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
Sbjct: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180
Query: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDAVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 240
SEWKDDELNFDLDRGVFPVVIQAVVDEGD VVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ
Sbjct: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGD-VVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 239
Query: 241 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 300
KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC
Sbjct: 240 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 299
Query: 301 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHS---- 356
TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHS
Sbjct: 300 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFK 359
Query: 357 ------------------NSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI 398
NSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI
Sbjct: 360 KSKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI 419
Query: 399 SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPP 458
SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPP
Sbjct: 420 SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPP 479
Query: 459 LGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP 518
LGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP
Sbjct: 480 LGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP 539
Query: 519 GRPTSMETAHGLATTSPTWPPLGGPSPDPSAAELTPL 555
GRPTSMETAHGLATTSPTWPPLGGPSPDPSAAELTPL
Sbjct: 540 GRPTSMETAHGLATTSPTWPPLGGPSPDPSAAELTPL 576
>gi|214010238 mahogunin, ring finger 1 isoform 4 [Homo sapiens]
Length = 531
Score = 1045 bits (2702), Expect = 0.0
Identities = 518/518 (100%), Positives = 518/518 (100%)
Query: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
Sbjct: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60
Query: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120
NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
Sbjct: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120
Query: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180
EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
Sbjct: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180
Query: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDAVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 240
SEWKDDELNFDLDRGVFPVVIQAVVDEGDAVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ
Sbjct: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDAVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 240
Query: 241 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 300
KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC
Sbjct: 241 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 300
Query: 301 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSNSDS 360
TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSNSDS
Sbjct: 301 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSNSDS 360
Query: 361 VPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDHILDSSR 420
VPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDHILDSSR
Sbjct: 361 VPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDHILDSSR 420
Query: 421 QKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLGGAELALRESSSPESFITEEV 480
QKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLGGAELALRESSSPESFITEEV
Sbjct: 421 QKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLGGAELALRESSSPESFITEEV 480
Query: 481 DESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP 518
DESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP
Sbjct: 481 DESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP 518
>gi|214010236 mahogunin, ring finger 1 isoform 3 [Homo sapiens]
Length = 552
Score = 1026 bits (2653), Expect = 0.0
Identities = 517/540 (95%), Positives = 517/540 (95%), Gaps = 23/540 (4%)
Query: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
Sbjct: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60
Query: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120
NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
Sbjct: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120
Query: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180
EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
Sbjct: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180
Query: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDAVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 240
SEWKDDELNFDLDRGVFPVVIQAVVDEGD VVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ
Sbjct: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGD-VVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 239
Query: 241 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 300
KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC
Sbjct: 240 KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC 299
Query: 301 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHS---- 356
TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHS
Sbjct: 300 TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFK 359
Query: 357 ------------------NSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI 398
NSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI
Sbjct: 360 KSKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI 419
Query: 399 SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPP 458
SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPP
Sbjct: 420 SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPP 479
Query: 459 LGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP 518
LGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP
Sbjct: 480 LGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLP 539
>gi|58743365 ring finger protein 157 [Homo sapiens]
Length = 679
Score = 571 bits (1471), Expect = e-163
Identities = 291/454 (64%), Positives = 349/454 (76%), Gaps = 11/454 (2%)
Query: 1 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL 60
MG++ SR+ AGVE++DI +NS YRYPPKSG+YFASHF MGGEKFD+ HPEGYLFGEN DL
Sbjct: 1 MGALTSRQHAGVEEVDIPSNSVYRYPPKSGSYFASHFIMGGEKFDSTHPEGYLFGENSDL 60
Query: 61 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL 120
NFLG+RPV FPY P P EPVKTLRSLVNIRKD+LRLV+ ++ SP E+ K +V Y++
Sbjct: 61 NFLGNRPVVFPYAAPPPQEPVKTLRSLVNIRKDTLRLVKCAEEVKSPGEEASKAKVHYNV 120
Query: 121 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF 180
EFTFD DARVAITIY QA+EEF NG A Y PK SLQSETV YKRGV QQF LPS +D
Sbjct: 121 EFTFDTDARVAITIYYQATEEFQNGIASYIPKDNSLQSETVQYKRGVCQQFCLPSHTVDP 180
Query: 181 SEWKDDELNFDLDRGVFPVVIQAVVDEGDAVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQ 240
SEW ++EL FDLDR V+P+V+ AVVDEGD E GH HVLL FEKH DG+F VKPLKQ
Sbjct: 181 SEWAEEELGFDLDREVYPLVVHAVVDEGD---EYFGHCHVLLGTFEKHTDGTFCVKPLKQ 237
Query: 241 KQIVDRVSYLLQEIYGIENK-NNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCL 299
KQ+VD VSYLLQEIYGIENK N Q++K ++DE SDNS ECVVCLSD+RDTLILPCRHLCL
Sbjct: 238 KQVVDGVSYLLQEIYGIENKYNTQDSKVAEDEVSDNSAECVVCLSDVRDTLILPCRHLCL 297
Query: 300 CTSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVL-AQSLEHDEHSNS 358
C +CADTLRYQANNCPICRLPFRALLQIRA+RKK G LSP SF+P++ +Q+ + +EH +S
Sbjct: 298 CNTCADTLRYQANNCPICRLPFRALLQIRAMRKKLGPLSPTSFNPIISSQTSDSEEHPSS 357
Query: 359 DSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI-----SDGLSQASCPLAAID 413
+++PPGYE +SLLEALNG SPA+P + + SG+ SDG ++ +D
Sbjct: 358 ENIPPGYEVVSLLEALNGPLTPSPAVPPLHVLGDGHLSGMLPSYGSDGHLPPVRTISPLD 417
Query: 414 HILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEE 447
+ DSS Q G K+ + SS +HEE++E
Sbjct: 418 RLSDSSSQ-GLKLKKSLSKSTSQNSSVLHEEEDE 450
>gi|14042925 ring finger protein 26 [Homo sapiens]
Length = 433
Score = 55.5 bits (132), Expect = 1e-07
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 254 IYGIENKNNQETKPSDD-----ENSDNSNECVVCLSDLRDTLILPCRHLCLCTSCADTLR 308
+ G E N +E D + + +CV+C + L+LPCRHLCLC +C + L
Sbjct: 350 VRGRERLNEEEPPGGQDPWKLLKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILM 409
Query: 309 YQA---NNCPICRLPFRALLQ 326
NCP+CR R +LQ
Sbjct: 410 RHPVYHRNCPLCR---RGILQ 427
>gi|217416388 neuralized homolog 1B [Homo sapiens]
Length = 555
Score = 53.1 bits (126), Expect = 6e-07
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 276 SNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANN-CPICRLPFRALLQI 327
+ EC VC DT+I C H+CLC SC L+ QA CPICR P + +++I
Sbjct: 500 NGECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKI 552
>gi|171542821 mitochondrial ubiquitin ligase activator of NFKB 1
[Homo sapiens]
Length = 352
Score = 51.2 bits (121), Expect = 2e-06
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 236 KPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCR 295
K Q+Q R+ + +E E + KP D E+ ++ CVVCLS + + L C
Sbjct: 261 KQYLQRQERLRLKQMQEEFQEHEAQLLSRAKPEDRESLKSA--CVVCLSSFKSCVFLECG 318
Query: 296 HLCLCTSCADTLRYQANNCPICR 318
H+C CT C L + CPICR
Sbjct: 319 HVCSCTECYRALP-EPKKCPICR 340
>gi|5729765 cell growth regulator with ring finger domain 1 [Homo
sapiens]
Length = 332
Score = 49.7 bits (117), Expect = 7e-06
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 8/58 (13%)
Query: 261 NNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICR 318
+ E +PS++ NS +CVVC + + ++LPCRH CLC C + CP+CR
Sbjct: 260 SESEVEPSEE----NSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQ----QCPMCR 309
>gi|223278368 neuralized-like [Homo sapiens]
Length = 574
Score = 48.5 bits (114), Expect = 2e-05
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 276 SNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANN-CPICRLPFRALLQ 326
S+EC +C DT+I C H+CLC +C L+ + CPICR P + +++
Sbjct: 518 SDECTICYEHAVDTVIYTCGHMCLCYACGLRLKKALHACCPICRRPIKDIIK 569
>gi|38348336 inter-alpha (globulin) inhibitor H5-like [Homo sapiens]
Length = 1313
Score = 44.3 bits (103), Expect = 3e-04
Identities = 58/233 (24%), Positives = 93/233 (39%), Gaps = 24/233 (10%)
Query: 330 VRKKPGALSPVSFSPVLAQSLEHDEHSNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPL 389
+R KP L P + +L H N D +P + + V P IP++P
Sbjct: 721 LRTKPTILVPSNSGTLLPLKPGSLSHQNPDILPTN--------SRTQVPPVKPGIPASPK 772
Query: 390 YEEITYSGISDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKL 449
+ T ++ S+ P L S KG PQS+ STL+ P P+H
Sbjct: 773 AD--TVKCVTPLHSKPGAPSHPQLGALTSQAPKGLPQSRPGVSTLQVPKYPLHTRPRVPA 830
Query: 450 SEDVDAPPPLGGAELALRESSSPESFITEEVDESSSPQQGTRAASIE-------NVLQDS 502
+ + P LG L S +P+ ++ + S+ P Q + + S+ ++ Q
Sbjct: 831 PKTRNNMPHLGPGILL---SKTPKILLS--LKPSAPPHQISTSISLSKPETPNPHMPQTP 885
Query: 503 SPEHCGR-GPPADIYLPGRPTSMETAHGLATTSPTWPPLGGPSPDPSAAELTP 554
P R PP L P ++ ++ G ++T+ T LG P P P L P
Sbjct: 886 LPPRPDRPRPPLPESLSTFPNTISSSTGPSSTTTT-SVLGEPLPMPFTPTLPP 937
>gi|53729363 leucine rich repeat and sterile alpha motif containing
1 [Homo sapiens]
Length = 723
Score = 43.9 bits (102), Expect = 4e-04
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 276 SNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQI 327
++ECVVCL + L C H+C C C LR CP+CR L+I
Sbjct: 672 ASECVVCLEREAQMIFLNCGHVCCCQQCCQPLR----TCPLCRQDIAQRLRI 719
>gi|53729361 leucine rich repeat and sterile alpha motif containing
1 [Homo sapiens]
Length = 723
Score = 43.9 bits (102), Expect = 4e-04
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 276 SNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQI 327
++ECVVCL + L C H+C C C LR CP+CR L+I
Sbjct: 672 ASECVVCLEREAQMIFLNCGHVCCCQQCCQPLR----TCPLCRQDIAQRLRI 719
>gi|53729359 leucine rich repeat and sterile alpha motif containing
1 [Homo sapiens]
Length = 723
Score = 43.9 bits (102), Expect = 4e-04
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 276 SNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQI 327
++ECVVCL + L C H+C C C LR CP+CR L+I
Sbjct: 672 ASECVVCLEREAQMIFLNCGHVCCCQQCCQPLR----TCPLCRQDIAQRLRI 719
>gi|21314764 Fc receptor-like 3 precursor [Homo sapiens]
Length = 734
Score = 43.1 bits (100), Expect = 7e-04
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 13/139 (9%)
Query: 323 ALLQIRAVRKKPGALSPV---SFSPVLAQSLEHDEHSNSDSVPPGY-EPISLLEALNGLR 378
ALL R+KPG LS S SP Q S D P + +P++ +E
Sbjct: 592 ALLHYARARRKPGGLSATGTSSHSPSECQEPSSSRPSRIDPQEPTHSKPLAPMELEPMYS 651
Query: 379 AVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDH----ILDSSRQKGRPQSKAPDSTL 434
V+P S P+Y +I +S + A+CP+ +H +L S +K P A +++
Sbjct: 652 NVNPG-DSNPIYSQI-WSIQHTKENSANCPMMHQEHEELTVLYSELKKTHPDDSAGEASS 709
Query: 435 RSPSSPIHEEDEEKLSEDV 453
R + HEED+E+ E+V
Sbjct: 710 RGRA---HEEDDEENYENV 725
>gi|21361493 ring finger protein 141 [Homo sapiens]
Length = 230
Score = 43.1 bits (100), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 275 NSNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRL 319
+ EC +C+ D R LILPC H C C D + NCPICRL
Sbjct: 151 DEEECCICM-DGRADLILPCAH-SFCQKCIDKWSDRHRNCPICRL 193
>gi|62865649 rififylin [Homo sapiens]
Length = 363
Score = 42.7 bits (99), Expect = 9e-04
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 242 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSD------NSNECVVCLSDLRDTLILPCR 295
++++RV+ L ++ G+++ ++D+N N C +C+ D ++L C
Sbjct: 277 ELMERVTRLYKDQKGLQHL----VSGAEDQNGGAVPSGLEENLCKICMDSPIDCVLLECG 332
Query: 296 HLCLCTSCADTLRYQANNCPICR 318
H+ CT C + N CPICR
Sbjct: 333 HMVTCTKCGKRM----NECPICR 351
>gi|17432433 rififylin [Homo sapiens]
Length = 363
Score = 42.7 bits (99), Expect = 9e-04
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 242 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSD------NSNECVVCLSDLRDTLILPCR 295
++++RV+ L ++ G+++ ++D+N N C +C+ D ++L C
Sbjct: 277 ELMERVTRLYKDQKGLQHL----VSGAEDQNGGAVPSGLEENLCKICMDSPIDCVLLECG 332
Query: 296 HLCLCTSCADTLRYQANNCPICR 318
H+ CT C + N CPICR
Sbjct: 333 HMVTCTKCGKRM----NECPICR 351
>gi|89993691 mouse double minute 2 homolog isoform MDM2e [Homo
sapiens]
Length = 179
Score = 42.4 bits (98), Expect = 0.001
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 239 KQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNE----------CVVCLSDLRD 288
KQ+ IV + LL +++G+ + + +E + + ++ + S E CV+C ++
Sbjct: 76 KQQHIVYCSNDLLGDLFGVPSFSVKEFEREETQDKEESVESSLPLNAIEPCVICQGRPKN 135
Query: 289 TLILPCR--HLCLCTSCADTLRYQANNCPICRLPFRALL 325
I+ + HL C +CA L+ + CP+CR P + ++
Sbjct: 136 GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 174
>gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens]
Length = 373
Score = 42.4 bits (98), Expect = 0.001
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Query: 242 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNE--CVVCLSDLRDTLILPCRHLCL 299
++V++V+ L +E N+ NQ++ + D ++ C +C+ + D ++L C H+
Sbjct: 292 ELVEKVNRLYKE-----NEENQKSYGERLQLQDEEDDSLCRICMDAVIDCVLLECGHMVT 346
Query: 300 CTSCADTLRYQANNCPICR 318
CT C + + CPICR
Sbjct: 347 CTKCGKRM----SECPICR 361
>gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens]
Length = 372
Score = 42.4 bits (98), Expect = 0.001
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Query: 242 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNE--CVVCLSDLRDTLILPCRHLCL 299
++V++V+ L +E N+ NQ++ + D ++ C +C+ + D ++L C H+
Sbjct: 291 ELVEKVNRLYKE-----NEENQKSYGERLQLQDEEDDSLCRICMDAVIDCVLLECGHMVT 345
Query: 300 CTSCADTLRYQANNCPICR 318
CT C + + CPICR
Sbjct: 346 CTKCGKRM----SECPICR 360
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 42.4 bits (98), Expect = 0.001
Identities = 67/283 (23%), Positives = 106/283 (37%), Gaps = 36/283 (12%)
Query: 294 CRHLCLCTSCADTLRYQANN---CPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSL 350
CRH C T+ D N C CR+ F+ ++ + +KP P F PV
Sbjct: 507 CRH-CFTTTSKDWHHGGRENILLCTDCRIHFKKYGELPPI-EKPVDPPPFMFKPVKE--- 561
Query: 351 EHDEHSNSDSVPPGYEPISLLEALNGLRAVSPAIP---SAPLYEEITYSGISDGLSQASC 407
E D S S+ S+ +G R PA P ++P+ E+I SG +
Sbjct: 562 EDDGLSGKHSMRTRRSRGSMSTLRSG-RKKQPASPDGRTSPINEDIRSSG-------RNS 613
Query: 408 PLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLGGAELALR 467
P AA DS + + +K SP ++ EK++ D + + +
Sbjct: 614 PSAASTSSNDSKAETVKKSAKKVKEEASSPLKS-NKRQREKVASDTEEADRTSSKKTKTQ 672
Query: 468 ESSSPESFITEEVDESSSPQQGTRAASI-ENVLQDSSPEHCGRGPPADI----------- 515
E S P S E + S S +S +++ QD+ P D
Sbjct: 673 EISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQ 732
Query: 516 YLPGRPTSMETAHGL----ATTSPTWPPLGGPSPDPSAAELTP 554
L +P +++ G+ ++ P P L P P PSA + P
Sbjct: 733 MLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPP 775
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 42.4 bits (98), Expect = 0.001
Identities = 67/283 (23%), Positives = 106/283 (37%), Gaps = 36/283 (12%)
Query: 294 CRHLCLCTSCADTLRYQANN---CPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSL 350
CRH C T+ D N C CR+ F+ ++ + +KP P F PV
Sbjct: 507 CRH-CFTTTSKDWHHGGRENILLCTDCRIHFKKYGELPPI-EKPVDPPPFMFKPVKE--- 561
Query: 351 EHDEHSNSDSVPPGYEPISLLEALNGLRAVSPAIP---SAPLYEEITYSGISDGLSQASC 407
E D S S+ S+ +G R PA P ++P+ E+I SG +
Sbjct: 562 EDDGLSGKHSMRTRRSRGSMSTLRSG-RKKQPASPDGRTSPINEDIRSSG-------RNS 613
Query: 408 PLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLGGAELALR 467
P AA DS + + +K SP ++ EK++ D + + +
Sbjct: 614 PSAASTSSNDSKAETVKKSAKKVKEEASSPLKS-NKRQREKVASDTEEADRTSSKKTKTQ 672
Query: 468 ESSSPESFITEEVDESSSPQQGTRAASI-ENVLQDSSPEHCGRGPPADI----------- 515
E S P S E + S S +S +++ QD+ P D
Sbjct: 673 EISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQ 732
Query: 516 YLPGRPTSMETAHGL----ATTSPTWPPLGGPSPDPSAAELTP 554
L +P +++ G+ ++ P P L P P PSA + P
Sbjct: 733 MLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPP 775
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 42.0 bits (97), Expect = 0.001
Identities = 60/232 (25%), Positives = 82/232 (35%), Gaps = 17/232 (7%)
Query: 335 GALSPVSFSPVLAQSLEHDEHSNSDSVP--PGYEPIS--LLEALNGLRAVSPAI-PSAPL 389
GA+SP S+SP S ++ S P P Y P S SP P++P
Sbjct: 1587 GAMSP-SYSPT---SPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPS 1642
Query: 390 YEEIT--YSGISDGLSQASCPLAAIDHILDSSRQKGRPQSKA--PDSTLRSPSSPIHEED 445
Y + YS S S S + + P S + P S SP+SP +
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 446 EEKLSEDVDAPPPLGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDS--- 502
S + P + S SP S S SP + + N S
Sbjct: 1703 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSY 1762
Query: 503 SPEHCGRGPPADIYLPGRPTSMETAHGLATTSPTWPPLGGPSPDPSAAELTP 554
SP P + Y P P T+ + TSP++ P PS PS+ TP
Sbjct: 1763 SPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT-SPSYSPSSPRYTP 1813
Score = 41.2 bits (95), Expect = 0.003
Identities = 57/229 (24%), Positives = 80/229 (34%), Gaps = 19/229 (8%)
Query: 334 PGALSPVSFSPVLAQSLEHDEHSNSDSVPPGYEPISLLEALNGLRAVSPAI-PSAPLYEE 392
PG SP SP A S + S P YEP S G SP+ P++P Y
Sbjct: 1575 PGPSSPYIPSPGGAMSPSYSPTS------PAYEPRSP----GGYTPQSPSYSPTSPSYSP 1624
Query: 393 IT--YSGISDGLSQASCPLAAIDHILDSSRQKGRPQSKA--PDSTLRSPSSPIHEEDEEK 448
+ YS S S S + + P S + P S SP+SP +
Sbjct: 1625 TSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1684
Query: 449 LSEDVDAPPPLGGAELALRESSSPESFITEEVDES---SSPQQGTRAASIENVLQDSSPE 505
S + P + S SP S S +SP + S SP
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 506 HCGRGPPADIYLPGRPTSMETAHGLATTSPTWPPLGGPSPDPSAAELTP 554
P + Y P P+ T+ + TSP + P P+ P++ +P
Sbjct: 1745 SPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT-SPNYSPTSPSYSP 1792
Score = 39.7 bits (91), Expect = 0.007
Identities = 50/203 (24%), Positives = 69/203 (33%), Gaps = 22/203 (10%)
Query: 357 NSDSVPPGYEPISLLEALNGLRAVSPAI-PSAPLYEEIT--YSGISDGLSQASCPLAAID 413
N P Y P S SP+ P++P Y + YS S S S +
Sbjct: 1747 NYSPTSPNYTPTS-----PSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTS 1801
Query: 414 HILDSSRQKGRPQSKA--PDSTLRSPSSPIHEEDEEKLSEDVDAPPPLGGAELALRESSS 471
S + PQS P S SPSSP + K + + P SS
Sbjct: 1802 PSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSP-----------SS 1850
Query: 472 PESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPGRPTSMETAHGLA 531
PE T +SP+ + SP P + Y P P T+ +
Sbjct: 1851 PEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYS 1910
Query: 532 TTSPTWPPLGGPSPDPSAAELTP 554
TSPT+ P P P++ +P
Sbjct: 1911 PTSPTYSPT-SPKYSPTSPTYSP 1932
Score = 36.6 bits (83), Expect = 0.062
Identities = 49/224 (21%), Positives = 74/224 (33%), Gaps = 24/224 (10%)
Query: 334 PGALSPVSFSPVLAQSLEHDEHSNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEI 393
PGA FSP A S++ PGY P + +P P +P
Sbjct: 1541 PGA---AGFSPSAA--------SDASGFSPGYSPAW---------SPTPGSPGSPGPSSP 1580
Query: 394 TYSGISDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDV 453
+S + P + + S +P S SP+SP + S
Sbjct: 1581 YIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1640
Query: 454 DAPPPLGGAELALRESSSPESFITEEVDES---SSPQQGTRAASIENVLQDSSPEHCGRG 510
+ P + S SP S S +SP + S SP
Sbjct: 1641 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1700
Query: 511 PPADIYLPGRPTSMETAHGLATTSPTWPPLGGPSPDPSAAELTP 554
P + Y P P+ T+ + TSP++ P PS P++ +P
Sbjct: 1701 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPSYSP 1743
Score = 32.3 bits (72), Expect = 1.2
Identities = 51/202 (25%), Positives = 69/202 (34%), Gaps = 21/202 (10%)
Query: 357 NSDSVPPGYEPISLLEALNGLRAVSPAI-PSAPLY--EEITYSGISDGLSQASCPLAAID 413
N P Y P S SP+ PS+P Y + TY+ S S +S +
Sbjct: 1782 NYSPTSPSYSPTS-----PSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTS 1836
Query: 414 HILDSSRQKGRPQSK--APDSTLRSPSSPIHEEDEEKLSEDVDAPPPLGGAELALRESSS 471
+ P S P S SP+SP + K S P + S
Sbjct: 1837 PKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYS 1896
Query: 472 PESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPGRPTSMETAHGLA 531
P S + SP T + + +SP + P Y P T+ G +
Sbjct: 1897 PTSPVYTPTSPKYSPTSPTYSPTSPKY-SPTSPTYSPTSPKGSTYSP-------TSPGYS 1948
Query: 532 TTSPTWPPLGGP--SPDPSAAE 551
TSPT+ L P SPD S E
Sbjct: 1949 PTSPTY-SLTSPAISPDDSDEE 1969
>gi|58530863 melanoma antigen family A, 10 [Homo sapiens]
Length = 369
Score = 42.0 bits (97), Expect = 0.001
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Query: 391 EEITYSGISDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSS--PIHEEDEEK 448
E++ + GL A PLA + S+ S P S+ S SS P+ E+
Sbjct: 14 EDLQSQSETQGLEGAQAPLAVEEDASSSTSTSSSFPSSFPSSSSSSSSSCYPLIPSTPEE 73
Query: 449 LSEDVDAPPPLGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDS 502
+S D + P P A++A S S ++ DE SS Q+ ++++ VL DS
Sbjct: 74 VSADDETPNPPQSAQIACSSPSVVASLPLDQSDEGSSSQKEESPSTLQ-VLPDS 126
>gi|10567820 melanoma antigen family A, 10 [Homo sapiens]
Length = 369
Score = 42.0 bits (97), Expect = 0.001
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Query: 391 EEITYSGISDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSS--PIHEEDEEK 448
E++ + GL A PLA + S+ S P S+ S SS P+ E+
Sbjct: 14 EDLQSQSETQGLEGAQAPLAVEEDASSSTSTSSSFPSSFPSSSSSSSSSCYPLIPSTPEE 73
Query: 449 LSEDVDAPPPLGGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDS 502
+S D + P P A++A S S ++ DE SS Q+ ++++ VL DS
Sbjct: 74 VSADDETPNPPQSAQIACSSPSVVASLPLDQSDEGSSSQKEESPSTLQ-VLPDS 126
>gi|57165361 ring finger protein 165 [Homo sapiens]
Length = 346
Score = 42.0 bits (97), Expect = 0.001
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Query: 266 KPSDDENSDNSNECVVCLS---DLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFR 322
K + E SD +C +CLS D D LPC HL C D + CPICR+
Sbjct: 281 KKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHL-FHQLCVDQWLAMSKKCPICRVDIE 339
Query: 323 ALL 325
L
Sbjct: 340 TQL 342
>gi|66529407 tensin [Homo sapiens]
Length = 1735
Score = 41.6 bits (96), Expect = 0.002
Identities = 53/209 (25%), Positives = 75/209 (35%), Gaps = 25/209 (11%)
Query: 359 DSVPPG--YEPISLLEALNG----LRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAAI 412
+SVPPG Y P L G + SPA S P + T+S AS P
Sbjct: 785 ESVPPGRSYSPYDYQPCLAGPNQDFHSKSPASSSLPAFLPTTHSPPGPQQPPASLPGLTA 844
Query: 413 DHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPLGGAELALRESSSP 472
+L P + L H + E A PP LR ++
Sbjct: 845 QPLLSPKEATSDPSRTPEEEPLNLEGLVAHRVAGVQAREKQPAEPP-----APLRRRAAS 899
Query: 473 ESFITEEVDESSSPQQGTRAASIENVLQDSSPEHC------GRGPPADIYLPGRPTSMET 526
+ + E++SP R+ + + +Q SPE G P + +L + E
Sbjct: 900 DGQYENQSPEATSP----RSPGVRSPVQCVSPELALTIALNPGGRPKEPHLHSYKEAFEE 955
Query: 527 AHGLATTSPTWPPLGGPSPDPSAAELTPL 555
G TSP+ PP G P A+ TPL
Sbjct: 956 MEG---TSPSSPPPSGVRSPPGLAK-TPL 980
>gi|21040269 ring finger protein 133 [Homo sapiens]
Length = 376
Score = 41.2 bits (95), Expect = 0.003
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 266 KPSDDENSDNSNECVVCLSDLRDT---LILPCRHLCLCTSCADTLRYQANNCPICRLPFR 322
K D+E + N + CV+C + IL C+H +C D CPIC+
Sbjct: 243 KEGDEEINPNGDSCVICFERYKPNDIVRILTCKHF-FHKNCIDPWILPHGTCPICKCDIL 301
Query: 323 ALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSNSDSVPP 363
+L I+ V + V S L ++L E ++ V P
Sbjct: 302 KVLGIQVVVENGTEPLQVLMSNELPETLSPSEEETNNEVSP 342
>gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo
sapiens]
Length = 618
Score = 40.4 bits (93), Expect = 0.004
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 279 CVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICR 318
C VC+ + +PC HL +C CA +LR CPICR
Sbjct: 571 CKVCMDKEVSVVFIPCGHLVVCQECAPSLR----KCPICR 606
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,723,459
Number of Sequences: 37866
Number of extensions: 1310827
Number of successful extensions: 4543
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 253
Number of HSP's that attempted gapping in prelim test: 4305
Number of HSP's gapped (non-prelim): 447
length of query: 555
length of database: 18,247,518
effective HSP length: 107
effective length of query: 448
effective length of database: 14,195,856
effective search space: 6359743488
effective search space used: 6359743488
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.