Guide to the Human Genome
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Name: CACNG7 Sequence: fasta or formatted (275aa) NCBI GI: 21361975
Description:

voltage-dependent calcium channel gamma-7 subunit

Referenced in:

Calcium and TRP Cation Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         18           2
 C cysteine            2.2          6           1
 D aspartate           2.5          7           1
 E glutamate           5.8         16           3
 F phenylalanine       6.5         18           2
 G glycine             5.8         16           1
 H histidine           2.5          7           1
 I isoleucine          5.5         15           1
 K lysine              2.2          6           1
 L leucine             9.8         27           3
 M methionine          2.9          8           1
 N asparagine          2.9          8           1
 P proline             5.5         15           2
 Q glutamine           2.9          8           1
 R arginine            5.8         16           2
 S serine             11.3         31           3
 T threonine           5.5         15           2
 V valine              7.3         20           2
 W tryptophan          1.5          4           1
 Y tyrosine            5.1         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   voltage-dependent calcium channel gamma-7 subunit [H... 
CACNG5                0.730   voltage-dependent calcium channel gamma-5 subunit is...
CACNG5                0.483   voltage-dependent calcium channel gamma-5 subunit iso...
CACNG4                0.169   voltage-dependent calcium channel gamma-4 subunit [Ho...
CACNG2                0.165   voltage-dependent calcium channel gamma-2 subunit [Ho...
CACNG3                0.157   voltage-dependent calcium channel gamma-3 subunit [Ho...
CACNG8                0.150   voltage-dependent calcium channel gamma-8 subunit [H...
TMEM178               0.039   transmembrane protein 178 
CACNG1                0.032   voltage-dependent calcium channel gamma-1 subunit [Ho...
TMEM114               0.030   PREDICTED: transmembrane protein 114 
CLDN1                 0.030   claudin 1 
TMEM114               0.030   transmembrane protein 114 
TMEM114               0.026   PREDICTED: transmembrane protein 114, partial [Homo...
GSG1L                 0.026   GSG1-like isoform 1 
GSG1L                 0.026   GSG1-like isoform 2 
CLDN19                0.022   claudin 19 isoform a 
CLDN19                0.022   claudin 19 isoform b 
CLDN10                0.022   claudin 10 isoform b 
TMEM182               0.021   transmembrane protein 182 
LOC644070             0.019   PREDICTED: germ cell-specific gene 1-like protein 2...
LOC644070             0.019   PREDICTED: germ cell-specific gene 1-like protein 2...
LOC644070             0.019   PREDICTED: germ cell-specific gene 1-like protein 2...
CLDN14                0.017   claudin 14 
CLDN14                0.017   claudin 14 
CLDN7                 0.017   claudin 7 
CLDN14                0.017   claudin 14 
CLDN14                0.017   claudin 14 
CLDN14                0.017   claudin 14 
TMEM225               0.015   transmembrane protein 225 
CACNG6                0.015   voltage-dependent calcium channel gamma-6 subunit is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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