Guide to the Human Genome
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Name: ZNF76 Sequence: fasta or formatted (570aa) NCBI GI: 21361146
Description:

zinc finger protein 76 (expressed in testis)

Referenced in:

Testes and Sperm
Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         53           2
 C cysteine            2.8         16           1
 D aspartate           4.2         24           2
 E glutamate           8.4         48           2
 F phenylalanine       1.9         11           1
 G glycine             7.7         44           1
 H histidine           5.1         29           2
 I isoleucine          3.0         17           2
 K lysine              4.2         24           1
 L leucine             6.7         38           2
 M methionine          1.2          7           1
 N asparagine          1.1          6           1
 P proline             4.9         28           3
 Q glutamine           6.5         37           3
 R arginine            4.4         25           1
 S serine              7.2         41           2
 T threonine          10.4         59           2
 V valine              7.5         43           2
 W tryptophan          0.0          0           0
 Y tyrosine            3.5         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 76 (expressed in testis) 
ZNF143                0.561   zinc finger protein 143 
ZNF782                0.159   zinc finger protein 782 
ZSCAN2                0.156   zinc finger protein 29 isoform 1 
ZNF629                0.156   zinc finger protein 629 
ZNF121                0.156   zinc finger protein 121 
ZNF358                0.155   zinc finger protein 358 
ZNF248                0.155   zinc finger protein 248 
LOC647678             0.154   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC647678             0.154   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC100287477          0.154   PREDICTED: hypothetical protein XP_002343697 
ZNF79                 0.154   zinc finger protein 79 
ZNF180                0.154   zinc finger protein 180 
ZNF45                 0.154   zinc finger protein 45 
ZNF135                0.154   zinc finger protein 135 
ZNF678                0.153   zinc finger protein 678 
ZNF668                0.153   zinc finger protein 668 
ZNF229                0.153   zinc finger protein 229 
ZNF214                0.153   zinc finger protein 214 
ZNF91                 0.152   zinc finger protein 91 
ZFP37                 0.152   zinc finger protein 37 homolog 
LOC729747             0.152   similar to zinc finger protein 709 
ZNF14                 0.151   zinc finger protein 14 
ZNF490                0.151   zinc finger protein 490 
ZNF195                0.151   zinc finger protein 195 isoform 2 
ZNF195                0.151   zinc finger protein 195 isoform 1 
ZNF195                0.151   zinc finger protein 195 isoform 3 
ZNF479                0.151   zinc finger protein 479 
ZNF624                0.151   zinc finger protein 624 
ZFP2                  0.151   zinc finger protein 2 homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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