Guide to the Human Genome
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Name: A1BG Sequence: fasta or formatted (495aa) NCBI GI: 21071030
Description:

alpha 1B-glycoprotein precursor

Referenced in:

Liver
Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         40           3
 C cysteine            2.0         10           1
 D aspartate           3.8         19           1
 E glutamate           8.1         40           2
 F phenylalanine       3.8         19           2
 G glycine             7.9         39           2
 H histidine           3.2         16           2
 I isoleucine          1.8          9           1
 K lysine              2.2         11           1
 L leucine            12.3         61           3
 M methionine          0.8          4           1
 N asparagine          2.2         11           1
 P proline             8.7         43           4
 Q glutamine           3.0         15           1
 R arginine            6.7         33           2
 S serine              7.5         37           2
 T threonine           6.3         31           2
 V valine              7.7         38           2
 W tryptophan          1.8          9           1
 Y tyrosine            2.0         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alpha 1B-glycoprotein precursor 
IGSF1                 0.160   immunoglobulin superfamily, member 1 isoform 1 [Homo...
LILRA6                0.093   leukocyte immunoglobulin-like receptor, subfamily A...
LILRB3                0.092   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB3                0.092   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB2                0.090   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB2                0.090   leukocyte immunoglobulin-like receptor, subfamily B...
LILRA4                0.085   leukocyte immunoglobulin-like receptor subfamily A m...
LILRA1                0.083   leukocyte immunoglobulin-like receptor, subfamily A (...
LILRB5                0.082   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB5                0.081   leukocyte immunoglobulin-like receptor, subfamily B, ...
LILRA2                0.079   leukocyte immunoglobulin-like receptor, subfamily A...
LILRA2                0.079   leukocyte immunoglobulin-like receptor, subfamily A (...
LILRB1                0.076   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB1                0.076   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB1                0.075   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB1                0.075   leukocyte immunoglobulin-like receptor, subfamily B...
LILRA3                0.067   leukocyte immunoglobulin-like receptor, subfamily A ...
LOC441864             0.059   hypothetical LOC441864 
LILRB5                0.055   leukocyte immunoglobulin-like receptor, subfamily B...
KIR3DL3               0.052   killer cell immunoglobulin-like receptor, three doma...
LILRA5                0.052   leukocyte immunoglobulin-like receptor subfamily A m...
LILRA5                0.052   leukocyte immunoglobulin-like receptor subfamily A m...
OSCAR                 0.050   osteoclast-associated receptor isoform 1 
KIR3DL1               0.047   killer cell immunoglobulin-like receptor, three dom...
OSCAR                 0.047   osteoclast-associated receptor isoform 4 
LILRB4                0.047   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB4                0.047   leukocyte immunoglobulin-like receptor, subfamily B...
OSCAR                 0.046   osteoclast-associated receptor isoform 3 
OSCAR                 0.045   osteoclast-associated receptor isoform 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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