BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|209969760 heat shock factor binding protein 1-like [Homo sapiens] (74 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|209969760 heat shock factor binding protein 1-like [Homo sapi... 147 2e-36 gi|4557647 heat shock factor binding protein 1 [Homo sapiens] 51 2e-07 gi|239753880 PREDICTED: similar to heat shock factor binding pro... 46 6e-06 gi|239748439 PREDICTED: hypothetical protein XP_002346659 [Homo ... 46 6e-06 gi|239742375 PREDICTED: hypothetical protein XP_002342506 [Homo ... 46 6e-06 gi|4557325 apolipoprotein E precursor [Homo sapiens] 33 0.038 gi|39812492 TH1-like protein [Homo sapiens] 33 0.050 gi|40254891 hypothetical protein FLJ20674 [Homo sapiens] 30 0.42 gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 30 0.55 gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 30 0.55 gi|30794488 kinesin family member 27 [Homo sapiens] 29 0.72 gi|154354990 ankyrin repeat domain 26 [Homo sapiens] 29 0.94 gi|16262452 cingulin [Homo sapiens] 28 1.2 gi|157649069 ATPase, aminophospholipid transporter (APLT), class... 28 2.1 gi|17978471 ATPase, aminophospholipid transporter (APLT), class ... 28 2.1 gi|14165274 golgi-associated microtubule-binding protein HOOK3 [... 28 2.1 gi|28274705 family with sequence similarity 9, member A [Homo sa... 28 2.1 gi|239754362 PREDICTED: chromosome 6 open reading frame 163 [Hom... 27 2.7 gi|239748909 PREDICTED: chromosome 6 open reading frame 163 [Hom... 27 2.7 gi|239742933 PREDICTED: hypothetical protein LOC206412 [Homo sap... 27 2.7 gi|6912242 adaptor protein, phosphotyrosine interaction, PH doma... 27 2.7 gi|222446620 hypothetical protein LOC342346 [Homo sapiens] 27 3.6 gi|116256481 TNFAIP3 interacting protein 1 [Homo sapiens] 27 3.6 gi|34878777 ring finger protein 20 [Homo sapiens] 27 3.6 gi|32189362 PTPRF interacting protein alpha 3 [Homo sapiens] 27 3.6 gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 27 4.7 gi|109255234 centrosomal protein 290kDa [Homo sapiens] 27 4.7 gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 27 4.7 gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 27 4.7 gi|55770834 centromere protein F [Homo sapiens] 27 4.7 >gi|209969760 heat shock factor binding protein 1-like [Homo sapiens] Length = 74 Score = 147 bits (370), Expect = 2e-36 Identities = 74/74 (100%), Positives = 74/74 (100%) Query: 1 MDVRGPEAPGGRALRDAAENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLMVQ 60 MDVRGPEAPGGRALRDAAENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLMVQ Sbjct: 1 MDVRGPEAPGGRALRDAAENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLMVQ 60 Query: 61 AGIENSIKEQMLKT 74 AGIENSIKEQMLKT Sbjct: 61 AGIENSIKEQMLKT 74 >gi|4557647 heat shock factor binding protein 1 [Homo sapiens] Length = 76 Score = 51.2 bits (121), Expect = 2e-07 Identities = 22/59 (37%), Positives = 38/59 (64%) Query: 14 LRDAAENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLMVQAGIENSIKEQML 72 L + L Q++Q+ FQ ++ + R+++M +RI+DL+KN+ DLM QAG+E E + Sbjct: 12 LTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVEELESENKI 70 >gi|239753880 PREDICTED: similar to heat shock factor binding protein 1 [Homo sapiens] Length = 88 Score = 46.2 bits (108), Expect = 6e-06 Identities = 20/63 (31%), Positives = 37/63 (58%) Query: 2 DVRGPEAPGGRALRDAAENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLMVQA 61 D+ + + L + L Q++Q+ FQ ++ + R ++M + +DL+KN+ DLM QA Sbjct: 5 DIAETDPKNEQELTSVVQKLLQQIQDKFQTMSDQIIGRTDDMSSCTDDLEKNIADLMTQA 64 Query: 62 GIE 64 G+E Sbjct: 65 GVE 67 >gi|239748439 PREDICTED: hypothetical protein XP_002346659 [Homo sapiens] Length = 88 Score = 46.2 bits (108), Expect = 6e-06 Identities = 20/63 (31%), Positives = 37/63 (58%) Query: 2 DVRGPEAPGGRALRDAAENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLMVQA 61 D+ + + L + L Q++Q+ FQ ++ + R ++M + +DL+KN+ DLM QA Sbjct: 5 DIAETDPKNEQELTSVVQKLLQQIQDKFQTMSDQIIGRTDDMSSCTDDLEKNIADLMTQA 64 Query: 62 GIE 64 G+E Sbjct: 65 GVE 67 >gi|239742375 PREDICTED: hypothetical protein XP_002342506 [Homo sapiens] Length = 88 Score = 46.2 bits (108), Expect = 6e-06 Identities = 20/63 (31%), Positives = 37/63 (58%) Query: 2 DVRGPEAPGGRALRDAAENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLMVQA 61 D+ + + L + L Q++Q+ FQ ++ + R ++M + +DL+KN+ DLM QA Sbjct: 5 DIAETDPKNEQELTSVVQKLLQQIQDKFQTMSDQIIGRTDDMSSCTDDLEKNIADLMTQA 64 Query: 62 GIE 64 G+E Sbjct: 65 GVE 67 >gi|4557325 apolipoprotein E precursor [Homo sapiens] Length = 317 Score = 33.5 bits (75), Expect = 0.038 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Query: 5 GPEAPGGRALRDAAENLF-QELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLM--VQA 61 GP GR +L Q LQE QA L RMEEMG+R D VK+ + V+A Sbjct: 200 GPLVEQGRVRAATVGSLAGQPLQERAQAWGERLRARMEEMGSRTRDRLDEVKEQVAEVRA 259 Query: 62 GIENSIKEQMLK 73 +E ++ L+ Sbjct: 260 KLEEQAQQIRLQ 271 >gi|39812492 TH1-like protein [Homo sapiens] Length = 590 Score = 33.1 bits (74), Expect = 0.050 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 6/55 (10%) Query: 19 ENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLMVQAGIENSIKEQMLK 73 EN+ Q L E++ A+ T+NL E + +Q V+ + VQ +EN +K ++K Sbjct: 77 ENVIQLLSENYTAVAQTVNLLAEWL------IQTGVEPVQVQETVENHLKSLLIK 125 >gi|40254891 hypothetical protein FLJ20674 [Homo sapiens] Length = 540 Score = 30.0 bits (66), Expect = 0.42 Identities = 12/26 (46%), Positives = 18/26 (69%) Query: 26 QEHFQALTATLNLRMEEMGNRIEDLQ 51 Q+H +TA +N +E+MGN +DLQ Sbjct: 497 QDHIHRVTALVNGNIEQMGNGFQDLQ 522 >gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] Length = 3907 Score = 29.6 bits (65), Expect = 0.55 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 14 LRDAAENLFQELQEHFQALTATLNLRMEEMGNRIED---LQKNVKDLMVQAGIENSIKEQ 70 L D + L ++ QEH QA M +M + ED LQ+ +K L Q +SI + Sbjct: 1587 LEDMRQELVRQYQEHQQATELLRQAHMRQMERQREDQEQLQEEIKRLNRQLAQRSSIDNE 1646 Query: 71 ML 72 L Sbjct: 1647 NL 1648 >gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] Length = 3899 Score = 29.6 bits (65), Expect = 0.55 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 14 LRDAAENLFQELQEHFQALTATLNLRMEEMGNRIED---LQKNVKDLMVQAGIENSIKEQ 70 L D + L ++ QEH QA M +M + ED LQ+ +K L Q +SI + Sbjct: 1587 LEDMRQELVRQYQEHQQATELLRQAHMRQMERQREDQEQLQEEIKRLNRQLAQRSSIDNE 1646 Query: 71 ML 72 L Sbjct: 1647 NL 1648 >gi|30794488 kinesin family member 27 [Homo sapiens] Length = 1401 Score = 29.3 bits (64), Expect = 0.72 Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 11 GRALRDAAENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDL 57 GR L E++ +L+E +AL A + R E + NR + L+ + +L Sbjct: 1044 GRVLSPEEEHVLFQLEEGIEALEAAIEYRNESIQNRQKSLRASFHNL 1090 >gi|154354990 ankyrin repeat domain 26 [Homo sapiens] Length = 1710 Score = 28.9 bits (63), Expect = 0.94 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 7/54 (12%) Query: 23 QELQEHFQAL---TATLNLRMEEMGNRIEDLQKNVKDLMVQAGIENSIKEQMLK 73 +++Q+H Q L A L + +++ ++IE+LQKN ++ A + KEQ+ K Sbjct: 1285 EKMQDHKQKLEKDNAKLKVTVKKQMDKIEELQKN----LLNANLSEDEKEQLKK 1334 >gi|16262452 cingulin [Homo sapiens] Length = 1203 Score = 28.5 bits (62), Expect = 1.2 Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 10/66 (15%) Query: 19 ENLFQELQEHFQALTATL-NLRME------EMGNRIEDLQKNVKDLMVQAGIENSI---K 68 +++FQ+ +E +A L LRME E+G +IE LQ+ ++ AG + K Sbjct: 572 QSMFQKNKEDLRATKQELLQLRMEKEEMEEELGEKIEVLQRELEQARASAGDTRQVEVLK 631 Query: 69 EQMLKT 74 +++L+T Sbjct: 632 KELLRT 637 >gi|157649069 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 isoform b [Homo sapiens] Length = 1149 Score = 27.7 bits (60), Expect = 2.1 Identities = 15/62 (24%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Query: 13 ALRDAAENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLMVQAGIENSIKEQML 72 A+ + +E+ FQE + +Q + ++ R+ ++ E ++KN++ L+ IE+ +++Q+ Sbjct: 595 AVAEISESDFQEWRAVYQRASTSVQNRLLKLEESYELIEKNLQ-LLGATAIEDKLQDQVP 653 Query: 73 KT 74 +T Sbjct: 654 ET 655 >gi|17978471 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 isoform a [Homo sapiens] Length = 1164 Score = 27.7 bits (60), Expect = 2.1 Identities = 15/62 (24%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Query: 13 ALRDAAENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLMVQAGIENSIKEQML 72 A+ + +E+ FQE + +Q + ++ R+ ++ E ++KN++ L+ IE+ +++Q+ Sbjct: 610 AVAEISESDFQEWRAVYQRASTSVQNRLLKLEESYELIEKNLQ-LLGATAIEDKLQDQVP 668 Query: 73 KT 74 +T Sbjct: 669 ET 670 >gi|14165274 golgi-associated microtubule-binding protein HOOK3 [Homo sapiens] Length = 718 Score = 27.7 bits (60), Expect = 2.1 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 3 VRGPEAPGGRALRDAAENLFQELQEHF--QALTATLNLRMEEMGNRIEDLQKNVKDLMVQ 60 + P +P GR L Q +E F +A +R EE+ I +L++ +L Sbjct: 233 IEDPNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTL 292 Query: 61 AGIENSIKEQM 71 A S+K+++ Sbjct: 293 ADEAQSLKDEI 303 >gi|28274705 family with sequence similarity 9, member A [Homo sapiens] Length = 332 Score = 27.7 bits (60), Expect = 2.1 Identities = 18/51 (35%), Positives = 25/51 (49%) Query: 22 FQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLMVQAGIENSIKEQML 72 FQE Q+ +Q T + R+ EM +E L K KD I +S +E L Sbjct: 280 FQEKQKRWQQPTGVRSWRLREMKPLLEQLLKAAKDTKDNYCIISSSEESEL 330 >gi|239754362 PREDICTED: chromosome 6 open reading frame 163 [Homo sapiens] Length = 203 Score = 27.3 bits (59), Expect = 2.7 Identities = 17/64 (26%), Positives = 32/64 (50%) Query: 11 GRALRDAAENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLMVQAGIENSIKEQ 70 G A R E + + LQE + ATL M+++ N +L K L + ++ ++E+ Sbjct: 96 GIAQRQRQEEVQEVLQEAEKTHQATLGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEE 155 Query: 71 MLKT 74 + +T Sbjct: 156 LQET 159 >gi|239748909 PREDICTED: chromosome 6 open reading frame 163 [Homo sapiens] Length = 203 Score = 27.3 bits (59), Expect = 2.7 Identities = 17/64 (26%), Positives = 32/64 (50%) Query: 11 GRALRDAAENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLMVQAGIENSIKEQ 70 G A R E + + LQE + ATL M+++ N +L K L + ++ ++E+ Sbjct: 96 GIAQRQRQEEVQEVLQEAEKTHQATLGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEE 155 Query: 71 MLKT 74 + +T Sbjct: 156 LQET 159 >gi|239742933 PREDICTED: hypothetical protein LOC206412 [Homo sapiens] Length = 203 Score = 27.3 bits (59), Expect = 2.7 Identities = 17/64 (26%), Positives = 32/64 (50%) Query: 11 GRALRDAAENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLMVQAGIENSIKEQ 70 G A R E + + LQE + ATL M+++ N +L K L + ++ ++E+ Sbjct: 96 GIAQRQRQEEVQEVLQEAEKTHQATLGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEE 155 Query: 71 MLKT 74 + +T Sbjct: 156 LQET 159 >gi|6912242 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 [Homo sapiens] Length = 709 Score = 27.3 bits (59), Expect = 2.7 Identities = 13/42 (30%), Positives = 25/42 (59%) Query: 18 AENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLMV 59 +ENL ++L+E + ++ EM + IE +Q+ ++DL V Sbjct: 215 SENLNEQLEEFLANIGTSVQNVRREMDSDIETMQQTIEDLEV 256 >gi|222446620 hypothetical protein LOC342346 [Homo sapiens] Length = 1141 Score = 26.9 bits (58), Expect = 3.6 Identities = 16/62 (25%), Positives = 29/62 (46%) Query: 8 APGGRALRDAAENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLMVQAGIENSI 67 A G+A R E + EL E Q + + + + +E+L K+V +V + ++ Sbjct: 815 ALAGKASRVDLETVALELNEMIQGILFKVTIHEDSWKKAMEELSKDVNTKLVHSDLDPLK 874 Query: 68 KE 69 KE Sbjct: 875 KE 876 >gi|116256481 TNFAIP3 interacting protein 1 [Homo sapiens] Length = 636 Score = 26.9 bits (58), Expect = 3.6 Identities = 10/35 (28%), Positives = 21/35 (60%) Query: 23 QELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDL 57 ++ +HF+++ ++ E+ ++ DLQK V DL Sbjct: 318 KQWDQHFRSMKQQYEQKITELRQKLADLQKQVTDL 352 >gi|34878777 ring finger protein 20 [Homo sapiens] Length = 975 Score = 26.9 bits (58), Expect = 3.6 Identities = 14/56 (25%), Positives = 29/56 (51%) Query: 16 DAAENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLMVQAGIENSIKEQM 71 DA + ++L+E L + + +E+G R + L+ N + M A + + +K Q+ Sbjct: 796 DAQLQVVRKLEEKEHLLQSNIGTGEKELGLRTQALEMNKRKAMEAAQLADDLKAQL 851 >gi|32189362 PTPRF interacting protein alpha 3 [Homo sapiens] Length = 1194 Score = 26.9 bits (58), Expect = 3.6 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 7/62 (11%) Query: 5 GPEAPGGRALR------DAAENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLM 58 GP+ GG R E L + L+E L AT LR+ E+G+ + LQ+ + + Sbjct: 20 GPDEAGGELERLMVTMLTERERLLETLREAQDGL-ATAQLRLRELGHEKDSLQRQLSIAL 78 Query: 59 VQ 60 Q Sbjct: 79 PQ 80 >gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] Length = 1684 Score = 26.6 bits (57), Expect = 4.7 Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 4/58 (6%) Query: 15 RDAAENLFQELQ-EHFQALTATLNLRMEEMGNRIEDLQKNVKDLMVQAGIENSIKEQM 71 +DA + ++ ++ L LN ++ N+IEDL++ +K +Q + +++E++ Sbjct: 1150 KDAQQTTLMNMEIADYERLMKELNQKLTNKNNKIEDLEQEIK---IQKQKQETLQEEI 1204 >gi|109255234 centrosomal protein 290kDa [Homo sapiens] Length = 2479 Score = 26.6 bits (57), Expect = 4.7 Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 12/71 (16%) Query: 11 GRALRDAAENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDLMVQ---------- 60 G+ L D ++L +ELQ + L L ++EE+ + +KN K+ +++ Sbjct: 1863 GKPLTDNKQSLIEELQRKVKKLENQLEGKVEEVDLK-PMKEKNAKEELIRWEEGKKWQAK 1921 Query: 61 -AGIENSIKEQ 70 GI N +KE+ Sbjct: 1922 IEGIRNKLKEK 1932 >gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2 [Homo sapiens] Length = 8749 Score = 26.6 bits (57), Expect = 4.7 Identities = 11/35 (31%), Positives = 23/35 (65%) Query: 23 QELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDL 57 +EL + F++ LR+EE+ +++ DL++ K+L Sbjct: 2241 EELLKEFESEVKNKALRLEELHSKVNDLKELTKNL 2275 >gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1 [Homo sapiens] Length = 8797 Score = 26.6 bits (57), Expect = 4.7 Identities = 11/35 (31%), Positives = 23/35 (65%) Query: 23 QELQEHFQALTATLNLRMEEMGNRIEDLQKNVKDL 57 +EL + F++ LR+EE+ +++ DL++ K+L Sbjct: 2234 EELLKEFESEVKNKALRLEELHSKVNDLKELTKNL 2268 >gi|55770834 centromere protein F [Homo sapiens] Length = 3114 Score = 26.6 bits (57), Expect = 4.7 Identities = 14/40 (35%), Positives = 18/40 (45%) Query: 16 DAAENLFQELQEHFQALTATLNLRMEEMGNRIEDLQKNVK 55 D E EL + ++ L R EE GN EDL + K Sbjct: 1005 DEREKSISELSDQYKQEKLILLQRCEETGNAYEDLSQKYK 1044 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.314 0.131 0.348 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,520,695 Number of Sequences: 37866 Number of extensions: 80542 Number of successful extensions: 469 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 428 Number of HSP's gapped (non-prelim): 59 length of query: 74 length of database: 18,247,518 effective HSP length: 46 effective length of query: 28 effective length of database: 16,505,682 effective search space: 462159096 effective search space used: 462159096 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.