TNXB 12176

Name: TNXB	Sequence: fasta or formatted (673aa)		NCBI GI: 20665034
Description: tenascin XB isoform 2		Referenced in: Fibronectin Family
Other entries for this name: alt prot [4242aa] tenascin XB isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 45 2 C cysteine 0.6 4 1 D aspartate 5.1 34 1 E glutamate 5.3 36 2 F phenylalanine 4.3 29 1 G glycine 9.8 66 3 H histidine 2.7 18 1 I isoleucine 1.8 12 1 K lysine 1.5 10 1 L leucine 11.0 74 2 M methionine 1.5 10 1 N asparagine 3.0 20 1 P proline 7.9 53 3 Q glutamine 4.6 31 1 R arginine 6.7 45 2 S serine 8.8 59 2 T threonine 7.4 50 2 V valine 5.8 39 2 W tryptophan 2.1 14 2 Y tyrosine 3.6 24 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tenascin XB isoform 2 TNXB 1.000 tenascin XB isoform 1 precursor TNC 0.364 tenascin C precursor TNR 0.324 tenascin R TNN 0.263 tenascin N FCN2 0.126 ficolin 2 isoform b precursor FCN2 0.126 ficolin 2 isoform a precursor FCN1 0.122 ficolin 1 precursor FIBCD1 0.120 fibrinogen C domain containing 1 FIBCD1 0.120 fibrinogen C domain containing 1 ANGPT1 0.112 angiopoietin 1 FCN3 0.111 ficolin 3 isoform 2 precursor MFAP4 0.109 microfibrillar-associated protein 4 FCN3 0.109 ficolin 3 isoform 1 precursor ANGPTL2 0.108 angiopoietin-like 2 precursor ANGPT4 0.107 angiopoietin 4 ANGPT2 0.105 angiopoietin 2 isoform c precursor ANGPT2 0.105 angiopoietin 2 isoform b precursor ANGPT2 0.105 angiopoietin 2 isoform a precursor ANGPTL1 0.104 angiopoietin-like 1 precursor ANGPTL7 0.102 angiopoietin-like 7 ANGPTL6 0.100 angiopoietin-like 6 FGA 0.099 fibrinogen, alpha polypeptide isoform alpha-E preprop... FGL1 0.098 fibrinogen-like 1 precursor FGL1 0.098 fibrinogen-like 1 precursor FGL1 0.098 fibrinogen-like 1 precursor FGL1 0.098 fibrinogen-like 1 precursor FN1 0.090 fibronectin 1 isoform 4 preproprotein FN1 0.090 fibronectin 1 isoform 2 preproprotein FGL2 0.090 fibrinogen-like 2 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.