Guide to the Human Genome
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Name: ANGPT1 Sequence: fasta or formatted (498aa) NCBI GI: 20532340
Description:

angiopoietin 1

Referenced in:

Cardiovascular System
Receptor Tyrosine Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         21           2
 C cysteine            2.0         10           1
 D aspartate           4.0         20           1
 E glutamate           8.0         40           3
 F phenylalanine       3.6         18           1
 G glycine             7.0         35           3
 H histidine           3.4         17           1
 I isoleucine          4.8         24           2
 K lysine              6.4         32           2
 L leucine            10.4         52           2
 M methionine          3.4         17           2
 N asparagine          7.4         37           2
 P proline             2.2         11           1
 Q glutamine           7.4         37           2
 R arginine            4.4         22           2
 S serine              5.4         27           2
 T threonine           6.8         34           2
 V valine              3.2         16           1
 W tryptophan          1.6          8           2
 Y tyrosine            4.0         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   angiopoietin 1 
ANGPT2                0.585   angiopoietin 2 isoform b precursor 
ANGPT2                0.583   angiopoietin 2 isoform a precursor 
ANGPT2                0.465   angiopoietin 2 isoform c precursor 
ANGPT4                0.436   angiopoietin 4 
ANGPTL1               0.193   angiopoietin-like 1 precursor 
ANGPTL7               0.188   angiopoietin-like 7 
ANGPTL2               0.181   angiopoietin-like 2 precursor 
FGL1                  0.162   fibrinogen-like 1 precursor 
FGL1                  0.162   fibrinogen-like 1 precursor 
FGL1                  0.162   fibrinogen-like 1 precursor 
FGL1                  0.162   fibrinogen-like 1 precursor 
ANGPTL6               0.161   angiopoietin-like 6 
FCN1                  0.159   ficolin 1 precursor 
FIBCD1                0.153   fibrinogen C domain containing 1 
FIBCD1                0.153   fibrinogen C domain containing 1 
FCN2                  0.151   ficolin 2 isoform b precursor 
FCN2                  0.151   ficolin 2 isoform a precursor 
TNXB                  0.151   tenascin XB isoform 2 
TNXB                  0.151   tenascin XB isoform 1 precursor 
FGL2                  0.151   fibrinogen-like 2 precursor 
MFAP4                 0.148   microfibrillar-associated protein 4 
FGA                   0.148   fibrinogen, alpha polypeptide isoform alpha-E preprop...
TNR                   0.141   tenascin R 
FCN3                  0.140   ficolin 3 isoform 2 precursor 
FCN3                  0.139   ficolin 3 isoform 1 precursor 
FGB                   0.138   fibrinogen, beta chain preproprotein 
ANGPTL4               0.138   angiopoietin-like 4 protein isoform a precursor [Hom...
TNC                   0.138   tenascin C precursor 
ANGPTL3               0.133   angiopoietin-like 3 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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