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Search of human proteins with 205277458
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|205277458 G patch domain containing 3 [Homo sapiens]
(525 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|205277458 G patch domain containing 3 [Homo sapiens] 1081 0.0
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 52 1e-06
gi|56788356 tuftelin interacting protein 11 [Homo sapiens] 45 1e-04
gi|8393259 tuftelin interacting protein 11 [Homo sapiens] 45 1e-04
gi|225735631 mesoderm induction early response 1 isoform g [Homo... 45 2e-04
gi|225735617 mesoderm induction early response 1 isoform h [Homo... 45 2e-04
gi|225735615 mesoderm induction early response 1 isoform a [Homo... 45 2e-04
gi|118130872 mesoderm induction early response 1 isoform f [Homo... 45 2e-04
gi|225735612 mesoderm induction early response 1 isoform e [Homo... 45 2e-04
gi|225735610 mesoderm induction early response 1 isoform d [Homo... 45 2e-04
gi|118130815 mesoderm induction early response 1 isoform c [Homo... 45 2e-04
gi|225735607 mesoderm induction early response 1 isoform b [Homo... 45 2e-04
gi|225735605 mesoderm induction early response 1 isoform a [Homo... 45 2e-04
gi|17975763 myelin transcription factor 1 [Homo sapiens] 45 2e-04
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 44 3e-04
gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens] 43 6e-04
gi|21735415 centromere protein B [Homo sapiens] 43 8e-04
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 43 8e-04
gi|9966799 UTP3, small subunit processome component [Homo sapiens] 41 0.002
gi|225735619 mesoderm induction early response 1 isoform i [Homo... 41 0.003
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 40 0.004
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 40 0.004
gi|156071450 nardilysin isoform a [Homo sapiens] 40 0.005
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 40 0.005
gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 fami... 40 0.005
gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32 fam... 40 0.005
gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32 fam... 40 0.005
gi|221219020 NYD-SP11 protein [Homo sapiens] 40 0.007
gi|157694505 LINE-1 type transposase domain containing 1 [Homo s... 40 0.007
gi|150378503 leiomodin 2 (cardiac) [Homo sapiens] 40 0.007
>gi|205277458 G patch domain containing 3 [Homo sapiens]
Length = 525
Score = 1081 bits (2795), Expect = 0.0
Identities = 525/525 (100%), Positives = 525/525 (100%)
Query: 1 MAVPGEAEEEATVYLVVSGIPSVLRSAHLRSYFSQFREERGGGFLCFHYRHRPERAPPQA 60
MAVPGEAEEEATVYLVVSGIPSVLRSAHLRSYFSQFREERGGGFLCFHYRHRPERAPPQA
Sbjct: 1 MAVPGEAEEEATVYLVVSGIPSVLRSAHLRSYFSQFREERGGGFLCFHYRHRPERAPPQA 60
Query: 61 APNSALIPTDPAAEGQLLSQTSATDVRPLSTRDSTPIQTRTCCCVISVRGLAQAQRLIRM 120
APNSALIPTDPAAEGQLLSQTSATDVRPLSTRDSTPIQTRTCCCVISVRGLAQAQRLIRM
Sbjct: 61 APNSALIPTDPAAEGQLLSQTSATDVRPLSTRDSTPIQTRTCCCVISVRGLAQAQRLIRM 120
Query: 121 YSGRRWLDSHGTWLPGRCLIRRLRLPTEASGLGSFPFKTRKELQSWKAENEAFTLADLKQ 180
YSGRRWLDSHGTWLPGRCLIRRLRLPTEASGLGSFPFKTRKELQSWKAENEAFTLADLKQ
Sbjct: 121 YSGRRWLDSHGTWLPGRCLIRRLRLPTEASGLGSFPFKTRKELQSWKAENEAFTLADLKQ 180
Query: 181 LPELNPPVLMPRGNVGTPLRVFLELIRACRLPPRIITQLQLQFPKTGSSRRYGNVPFEYE 240
LPELNPPVLMPRGNVGTPLRVFLELIRACRLPPRIITQLQLQFPKTGSSRRYGNVPFEYE
Sbjct: 181 LPELNPPVLMPRGNVGTPLRVFLELIRACRLPPRIITQLQLQFPKTGSSRRYGNVPFEYE 240
Query: 241 DSETVEQEELVYTAEGEEIPQGTYLADIPASPCGEPEEEVGKEEEEESHSDEDDDRGEEW 300
DSETVEQEELVYTAEGEEIPQGTYLADIPASPCGEPEEEVGKEEEEESHSDEDDDRGEEW
Sbjct: 241 DSETVEQEELVYTAEGEEIPQGTYLADIPASPCGEPEEEVGKEEEEESHSDEDDDRGEEW 300
Query: 301 ERHEALHEDVTGQERTTEQLFEEEIELKWEKGGSGLVFYTDAQFWQEEEGDFDEQTADDW 360
ERHEALHEDVTGQERTTEQLFEEEIELKWEKGGSGLVFYTDAQFWQEEEGDFDEQTADDW
Sbjct: 301 ERHEALHEDVTGQERTTEQLFEEEIELKWEKGGSGLVFYTDAQFWQEEEGDFDEQTADDW 360
Query: 361 DVDMSVYYDRDGGDKDARDSVQMRLEQRLRDGQEDGSVIERQVGTFERHTKGIGRKVMER 420
DVDMSVYYDRDGGDKDARDSVQMRLEQRLRDGQEDGSVIERQVGTFERHTKGIGRKVMER
Sbjct: 361 DVDMSVYYDRDGGDKDARDSVQMRLEQRLRDGQEDGSVIERQVGTFERHTKGIGRKVMER 420
Query: 421 QGWAEGQGLGCRCSGVPEALDSDGQHPRCKRGLGYHGEKLQPFGQLKRPRRNGLGLISTI 480
QGWAEGQGLGCRCSGVPEALDSDGQHPRCKRGLGYHGEKLQPFGQLKRPRRNGLGLISTI
Sbjct: 421 QGWAEGQGLGCRCSGVPEALDSDGQHPRCKRGLGYHGEKLQPFGQLKRPRRNGLGLISTI 480
Query: 481 YDEPLPQDQTESLLRRQPPTSMKFRTDMAFVRGSSCASDSPSLPD 525
YDEPLPQDQTESLLRRQPPTSMKFRTDMAFVRGSSCASDSPSLPD
Sbjct: 481 YDEPLPQDQTESLLRRQPPTSMKFRTDMAFVRGSSCASDSPSLPD 525
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 52.4 bits (124), Expect = 1e-06
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 12/220 (5%)
Query: 238 EYEDSETV---EQEELVYTAEGEEIPQGTYLADIPASPCGEPEEEVGKEEEEESHSDEDD 294
E E+ ET E++E EG E+ +G + GE EEE G+ EEEE +E++
Sbjct: 795 EGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEE-GEGEEEEGEGEEEEGEGEEEE 853
Query: 295 DRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGSGLVFYTDAQFWQEEEGDFDE 354
G+ E E + G+E E EEE E + E+ G G +E EG+ +E
Sbjct: 854 GEGKGEEEGEEGEGEEEGEEGEGEG-EEEEGEGEGEEEGEG------EGEEEEGEGEGEE 906
Query: 355 QTADDWDVDMSVYYDRDGGDKDARDSVQMRLEQRLRDGQEDGSVIERQVGTFERHTKGIG 414
+ + + + + G++ + + E DG+ +G E + E +G G
Sbjct: 907 EGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEG 966
Query: 415 RKVMERQGWAEGQGLGCRCSGVPEALDSDGQHPRCKRGLG 454
+ E +G EG+G G G E + +G+ + G G
Sbjct: 967 EEEGEGEG-EEGEGEGEEEEGEGEGEEEEGEEEGEEEGEG 1005
Score = 43.5 bits (101), Expect = 5e-04
Identities = 57/232 (24%), Positives = 93/232 (40%), Gaps = 25/232 (10%)
Query: 220 QLQFPKTGSSRRYGNVPFEYEDSETVEQEELVYTAEGEEIPQGTYLADIPASPCGEPEEE 279
+++ P G ++ D E EQ+E +G + + + + GE EEE
Sbjct: 685 EMERPGEGEKELAEKEEWKKRDGEEQEQKE---REQGHQKERNQEMEEGGEEEHGEGEEE 741
Query: 280 VGKEEEEESHSDEDDDRGE--------EWERHEALHEDVTGQERTTEQL------FEEEI 325
G EEEE E + GE E E E E+ G+E E+ EEE
Sbjct: 742 EGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEET 801
Query: 326 ELKW---EKGG---SGLVFYTDAQFWQEEEGDFDEQTADDWDVDMSVYYDRDGGDKDARD 379
E + E+GG G V + +EEE E+ + + + + +G K +
Sbjct: 802 EGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEE 861
Query: 380 SVQMRLEQRLRDGQEDGSVIERQVGTFERHTKGIGRKVM-ERQGWAEGQGLG 430
+ E+ +G+ +G E + G E +G G + E +G EG+G G
Sbjct: 862 GEEGEGEEEGEEGEGEGEEEEGE-GEGEEEGEGEGEEEEGEGEGEEEGEGEG 912
Score = 38.9 bits (89), Expect = 0.012
Identities = 63/266 (23%), Positives = 112/266 (42%), Gaps = 55/266 (20%)
Query: 240 EDSETVEQEELVYTAEG----EEIPQGTYLADIPASPCGE--------PEEEVGKE---- 283
E+ ++ E EE+ EG + + QG ++ PA+ PEE+ G E
Sbjct: 540 ENDDSDEYEEMSEMKEGKACKQHVSQGIFMTQ-PATTIEAFSDEEVEIPEEKEGAEDSKG 598
Query: 284 ---EEEESHSDEDDDR--GEEWERHEALHEDVTGQERTTEQLFEEEIELK---------- 328
EE+E ++E++ + G E+ E L +D+T + +E + E +
Sbjct: 599 NGIEEQEVEANEENVKVHGGRKEKTEILSDDLTDKAEVSEGKAKSVGEAEDGPEGRGDGT 658
Query: 329 WEKGGSGLVFYTDAQFWQEEEGDFDEQTADDWDVDMSVYYDRDGGDKDARDSVQMRLEQR 388
E+G SG A+ WQ+EE + E+ +++ +++ +K+ E +
Sbjct: 659 CEEGSSG------AEHWQDEEREKGEKDKGRGEMERPGEGEKELAEKE---------EWK 703
Query: 389 LRDGQEDGSVIERQVGTFERHTKGIGRKVMERQGWAEGQGLGCRCSG-VPEALDSDGQHP 447
RDG+E ER+ G H K +++ E G E G G G E + +G+
Sbjct: 704 KRDGEEQEQK-EREQG----HQKERNQEMEE--GGEEEHGEGEEEEGDREEEEEKEGEGK 756
Query: 448 RCKRGLGYHGEKLQPFGQLKRPRRNG 473
G GE+ + G+ K+ R G
Sbjct: 757 EEGEGEEVEGEREKEEGERKKEERAG 782
Score = 38.1 bits (87), Expect = 0.020
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 17/169 (10%)
Query: 277 EEEVGKEEEEESHSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGSGL 336
E E G EEE +E+ DR EE E+ E+ G+E E+ EE K E+ G
Sbjct: 726 EMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGK-- 783
Query: 337 VFYTDAQFWQEEEGDFDEQTADDWDVDMSVYYDRDGGDKDARDSVQMRLEQRLRDGQEDG 396
+ EEEGD E ++ + + +GG+ + + + + E R+ +E+
Sbjct: 784 ------EEKGEEEGDQGE--GEEEETEGRGEEKEEGGEVEGGEVEEGKGE---REEEEEE 832
Query: 397 SVIERQVGTFERHTKGIGRKVMERQGWAEGQGLGCRCSGVPEALDSDGQ 445
E + G E +G G E +G +G+ G G E + +G+
Sbjct: 833 GEGEEEEGEGEEE-EGEGE---EEEGEGKGEEEGEEGEGEEEGEEGEGE 877
Score = 38.1 bits (87), Expect = 0.020
Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 26/187 (13%)
Query: 238 EYEDSETVEQEELVYTAEGEEIPQGTYLADIPASPCGEPEEEVGKEEEEESHSDEDDDRG 297
E E+ E +EE EGE +G GE EE G+ EEEE + +++ G
Sbjct: 949 EEEEGEWEGEEE---EGEGEGEEEGE----------GEGEEGEGEGEEEEGEGEGEEEEG 995
Query: 298 EEWERHEALHEDVTGQERTTEQLFEEEIELKWEKG-GSGLVFYTDAQFWQEE---EGDFD 353
EE E E+ E E+ E E E++ E+G G G + + + E EG+ +
Sbjct: 996 EEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEEN 1055
Query: 354 EQTADDWDVDMSVYYDRDGGDKDARDSVQMRLEQRLRDGQEDGSVIERQVGTFER----H 409
+ ++ + + Y + + + +D + + +++ GSV + T+++ +
Sbjct: 1056 RRNREEEEEEEGKYQETGEEENERQDGEEYKKVSKIK-----GSVKYGKHKTYQKKSVTN 1110
Query: 410 TKGIGRK 416
T+G G++
Sbjct: 1111 TQGNGKE 1117
>gi|56788356 tuftelin interacting protein 11 [Homo sapiens]
Length = 837
Score = 45.4 bits (106), Expect = 1e-04
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 348 EEGDFDEQTADDWDVDMSVYYDRDGGDKDARDSVQMRLEQRLRDGQEDGSVIERQVGTFE 407
E+ D +E+ D + +D G + + + Q+ G G+ G++E
Sbjct: 96 EDSDDEEKPVKQDD------FPKDFGPRKLKTGGNFKPSQK---GFAGGTKSFMDFGSWE 146
Query: 408 RHTKGIGRKVMERQGWAEGQGLGCRCSGVPEALDSDGQHPRCKRGLGYHGEK 459
RHTKGIG+K++++ G+ G+GLG G+ +++ + + K +G +G +
Sbjct: 147 RHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEA--KQRKGKGAVGAYGSE 196
>gi|8393259 tuftelin interacting protein 11 [Homo sapiens]
Length = 837
Score = 45.4 bits (106), Expect = 1e-04
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 348 EEGDFDEQTADDWDVDMSVYYDRDGGDKDARDSVQMRLEQRLRDGQEDGSVIERQVGTFE 407
E+ D +E+ D + +D G + + + Q+ G G+ G++E
Sbjct: 96 EDSDDEEKPVKQDD------FPKDFGPRKLKTGGNFKPSQK---GFAGGTKSFMDFGSWE 146
Query: 408 RHTKGIGRKVMERQGWAEGQGLGCRCSGVPEALDSDGQHPRCKRGLGYHGEK 459
RHTKGIG+K++++ G+ G+GLG G+ +++ + + K +G +G +
Sbjct: 147 RHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEA--KQRKGKGAVGAYGSE 196
>gi|225735631 mesoderm induction early response 1 isoform g [Homo
sapiens]
Length = 470
Score = 45.1 bits (105), Expect = 2e-04
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 30/156 (19%)
Query: 238 EYEDSETVEQEELVYTAEGE-----EIPQGTYLADIP----------ASPCGEPEEEVGK 282
+++D T+E+EE++ EGE EI D+P S PEE+ +
Sbjct: 49 DFDDERTLEEEEMM---EGETNFSSEIEDLAREGDMPIHELLSLYGYGSTVRLPEEDEEE 105
Query: 283 EEEEES-----HSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGSGLV 337
EEEEE +D DD+ G E E +D +GQE T+ ++ + + ++
Sbjct: 106 EEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDAQEII 165
Query: 338 -------FYTDAQFWQEEEGDFDEQTADDWDVDMSV 366
F T+++ +E E D D ++DW ++ V
Sbjct: 166 RPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIMV 201
>gi|225735617 mesoderm induction early response 1 isoform h [Homo
sapiens]
Length = 485
Score = 45.1 bits (105), Expect = 2e-04
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 30/156 (19%)
Query: 238 EYEDSETVEQEELVYTAEGE-----EIPQGTYLADIP----------ASPCGEPEEEVGK 282
+++D T+E+EE++ EGE EI D+P S PEE+ +
Sbjct: 5 DFDDERTLEEEEMM---EGETNFSSEIEDLAREGDMPIHELLSLYGYGSTVRLPEEDEEE 61
Query: 283 EEEEES-----HSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGSGLV 337
EEEEE +D DD+ G E E +D +GQE T+ ++ + + ++
Sbjct: 62 EEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDAQEII 121
Query: 338 -------FYTDAQFWQEEEGDFDEQTADDWDVDMSV 366
F T+++ +E E D D ++DW ++ V
Sbjct: 122 RPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIMV 157
>gi|225735615 mesoderm induction early response 1 isoform a [Homo
sapiens]
Length = 529
Score = 45.1 bits (105), Expect = 2e-04
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 30/156 (19%)
Query: 238 EYEDSETVEQEELVYTAEGE-----EIPQGTYLADIP----------ASPCGEPEEEVGK 282
+++D T+E+EE++ EGE EI D+P S PEE+ +
Sbjct: 49 DFDDERTLEEEEMM---EGETNFSSEIEDLAREGDMPIHELLSLYGYGSTVRLPEEDEEE 105
Query: 283 EEEEES-----HSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGSGLV 337
EEEEE +D DD+ G E E +D +GQE T+ ++ + + ++
Sbjct: 106 EEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDAQEII 165
Query: 338 -------FYTDAQFWQEEEGDFDEQTADDWDVDMSV 366
F T+++ +E E D D ++DW ++ V
Sbjct: 166 RPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIMV 201
>gi|118130872 mesoderm induction early response 1 isoform f [Homo
sapiens]
Length = 433
Score = 45.1 bits (105), Expect = 2e-04
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 30/156 (19%)
Query: 238 EYEDSETVEQEELVYTAEGE-----EIPQGTYLADIP----------ASPCGEPEEEVGK 282
+++D T+E+EE++ EGE EI D+P S PEE+ +
Sbjct: 32 DFDDERTLEEEEMM---EGETNFSSEIEDLAREGDMPIHELLSLYGYGSTVRLPEEDEEE 88
Query: 283 EEEEES-----HSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGSGLV 337
EEEEE +D DD+ G E E +D +GQE T+ ++ + + ++
Sbjct: 89 EEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDAQEII 148
Query: 338 -------FYTDAQFWQEEEGDFDEQTADDWDVDMSV 366
F T+++ +E E D D ++DW ++ V
Sbjct: 149 RPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIMV 184
>gi|225735612 mesoderm induction early response 1 isoform e [Homo
sapiens]
Length = 486
Score = 45.1 bits (105), Expect = 2e-04
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 30/156 (19%)
Query: 238 EYEDSETVEQEELVYTAEGE-----EIPQGTYLADIP----------ASPCGEPEEEVGK 282
+++D T+E+EE++ EGE EI D+P S PEE+ +
Sbjct: 85 DFDDERTLEEEEMM---EGETNFSSEIEDLAREGDMPIHELLSLYGYGSTVRLPEEDEEE 141
Query: 283 EEEEES-----HSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGSGLV 337
EEEEE +D DD+ G E E +D +GQE T+ ++ + + ++
Sbjct: 142 EEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDAQEII 201
Query: 338 -------FYTDAQFWQEEEGDFDEQTADDWDVDMSV 366
F T+++ +E E D D ++DW ++ V
Sbjct: 202 RPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIMV 237
>gi|225735610 mesoderm induction early response 1 isoform d [Homo
sapiens]
Length = 450
Score = 45.1 bits (105), Expect = 2e-04
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 30/156 (19%)
Query: 238 EYEDSETVEQEELVYTAEGE-----EIPQGTYLADIP----------ASPCGEPEEEVGK 282
+++D T+E+EE++ EGE EI D+P S PEE+ +
Sbjct: 49 DFDDERTLEEEEMM---EGETNFSSEIEDLAREGDMPIHELLSLYGYGSTVRLPEEDEEE 105
Query: 283 EEEEES-----HSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGSGLV 337
EEEEE +D DD+ G E E +D +GQE T+ ++ + + ++
Sbjct: 106 EEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDAQEII 165
Query: 338 -------FYTDAQFWQEEEGDFDEQTADDWDVDMSV 366
F T+++ +E E D D ++DW ++ V
Sbjct: 166 RPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIMV 201
>gi|118130815 mesoderm induction early response 1 isoform c [Homo
sapiens]
Length = 512
Score = 45.1 bits (105), Expect = 2e-04
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 30/156 (19%)
Query: 238 EYEDSETVEQEELVYTAEGE-----EIPQGTYLADIP----------ASPCGEPEEEVGK 282
+++D T+E+EE++ EGE EI D+P S PEE+ +
Sbjct: 32 DFDDERTLEEEEMM---EGETNFSSEIEDLAREGDMPIHELLSLYGYGSTVRLPEEDEEE 88
Query: 283 EEEEES-----HSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGSGLV 337
EEEEE +D DD+ G E E +D +GQE T+ ++ + + ++
Sbjct: 89 EEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDAQEII 148
Query: 338 -------FYTDAQFWQEEEGDFDEQTADDWDVDMSV 366
F T+++ +E E D D ++DW ++ V
Sbjct: 149 RPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIMV 184
>gi|225735607 mesoderm induction early response 1 isoform b [Homo
sapiens]
Length = 565
Score = 45.1 bits (105), Expect = 2e-04
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 30/156 (19%)
Query: 238 EYEDSETVEQEELVYTAEGE-----EIPQGTYLADIP----------ASPCGEPEEEVGK 282
+++D T+E+EE++ EGE EI D+P S PEE+ +
Sbjct: 85 DFDDERTLEEEEMM---EGETNFSSEIEDLAREGDMPIHELLSLYGYGSTVRLPEEDEEE 141
Query: 283 EEEEES-----HSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGSGLV 337
EEEEE +D DD+ G E E +D +GQE T+ ++ + + ++
Sbjct: 142 EEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDAQEII 201
Query: 338 -------FYTDAQFWQEEEGDFDEQTADDWDVDMSV 366
F T+++ +E E D D ++DW ++ V
Sbjct: 202 RPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIMV 237
>gi|225735605 mesoderm induction early response 1 isoform a [Homo
sapiens]
Length = 529
Score = 45.1 bits (105), Expect = 2e-04
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 30/156 (19%)
Query: 238 EYEDSETVEQEELVYTAEGE-----EIPQGTYLADIP----------ASPCGEPEEEVGK 282
+++D T+E+EE++ EGE EI D+P S PEE+ +
Sbjct: 49 DFDDERTLEEEEMM---EGETNFSSEIEDLAREGDMPIHELLSLYGYGSTVRLPEEDEEE 105
Query: 283 EEEEES-----HSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGSGLV 337
EEEEE +D DD+ G E E +D +GQE T+ ++ + + ++
Sbjct: 106 EEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDAQEII 165
Query: 338 -------FYTDAQFWQEEEGDFDEQTADDWDVDMSV 366
F T+++ +E E D D ++DW ++ V
Sbjct: 166 RPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIMV 201
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 44.7 bits (104), Expect = 2e-04
Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 11/216 (5%)
Query: 189 LMPRGNVGTPLRVFLELIRACRLPPRIITQLQLQFPKTGSSRRYGNVPFEYEDSETVEQE 248
L+ G + V +L +A + P I+ LQ S + + ED+E V +
Sbjct: 168 LLNLGQIAEETLVEEDLGQAAKPGPGIVHLLQEAAEGAASEEGEKGLFIQPEDAEEVVE- 226
Query: 249 ELVYTAEGEEI-PQGTYLADIPASPCGEPEEEVGKEEEEESHSDEDDDRGEEWERHEALH 307
V T +++ PQ L D + + + + EEE+E +E+++ E+ E E
Sbjct: 227 --VTTERSQDLCPQS--LEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEE 282
Query: 308 EDVTGQERTTEQLFEEEIELKWEKGGSGLVF-----YTDAQFWQEEEGDFDEQTADDWDV 362
E+ +E E+ EEE E + E+ ++F +T AQ E G ++ V
Sbjct: 283 EEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTSAQKAPELRGPESPSPKPEYSV 342
Query: 363 DMSVYYDRDGGDKDARDSVQMRLEQRLRDGQEDGSV 398
+ V D D + + E ++D G++
Sbjct: 343 IVEVRSDDDKDEDTHSRKSTVTDESEMQDMMTRGNL 378
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 44.3 bits (103), Expect = 3e-04
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 267 DIPASPCGEPEEEVGKEEEEESHSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIE 326
D+ +EE +EEEEE +E+++ E++E E E+ +E E+ FEEE E
Sbjct: 877 DLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFE 936
Query: 327 LKWEKGGSGLVFYTDAQFWQEEEGDFDEQTADDWDVDMSVYYDRDGGD 374
E+ G +EEE + DE+ ++ + + + GG+
Sbjct: 937 ---EEEGE----------LEEEEEEEDEEEEEELEEVEDLEFGTAGGE 971
>gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens]
Length = 543
Score = 43.1 bits (100), Expect = 6e-04
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 228 SSRRYGNVPFEYEDSETVEQEELVYTAEGEEIPQGTYLADIPASPCGEPEEEVGKEEEEE 287
S+R + + + E +E EE + A+ EE D P S EEE KEE EE
Sbjct: 435 STRSFPSYYTSHVQEEQIEVEETIEAAKAEEAK------DEPPSEGEAEEEEKDKEEAEE 488
Query: 288 SHSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKG 332
+ E+++ +E E EA E+ G+ E+ E E E K +G
Sbjct: 489 EEAAEEEEAAKE-ESEEAKEEEEGGEGEEGEETKEAEEEEKKVEG 532
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 42.7 bits (99), Expect = 8e-04
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Query: 275 EPEEEVGKEEEEESHSDEDDDRGEEWERHEALHEDVTGQERTTEQ---LFEEEIELKWEK 331
E EEE +EEEEE +E+++ GEE E E++ +E E+ +EE E E
Sbjct: 407 EEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEEDEES 466
Query: 332 GGSGLVFYTDAQFWQEEEGDFDEQTADDWDVDMSVYYDRDGGDKDARDSVQMRLEQRLRD 391
GL AQ E G F A + + + +GG+ DS + E+ +
Sbjct: 467 SSEGLEAEDWAQGVVEAGGSFGAYGAQE-EAQCPTLHFLEGGEDSDSDSEEEDDEEEDDE 525
Query: 392 GQED 395
++D
Sbjct: 526 DEDD 529
Score = 38.9 bits (89), Expect = 0.012
Identities = 46/160 (28%), Positives = 61/160 (38%), Gaps = 47/160 (29%)
Query: 238 EYEDSETVEQEELVYTAEGEEIPQGTYLADIPASPCGEPEEEVGKEEEEESHSDEDDDRG 297
E E+ E E+EE EGEE EEE G+EEEEE E ++ G
Sbjct: 404 EGEEEEEEEEEEEEEEGEGEE------------------EEEEGEEEEEE--GGEGEELG 443
Query: 298 EEWERHEALHEDVTGQERTTEQLFEEEIELK-WEKG----GSGLVFY------------- 339
EE E E D +E E+ E +E + W +G G Y
Sbjct: 444 EEEEVEEEGDVDSDEEEEEDEESSSEGLEAEDWAQGVVEAGGSFGAYGAQEEAQCPTLHF 503
Query: 340 ----TDAQFWQEEEGDFDEQTADDWDVDMSVYYDRDGGDK 375
D+ EEE D +E D+ D D D + GD+
Sbjct: 504 LEGGEDSDSDSEEEDDEEEDDEDEDDDD-----DEEDGDE 538
Score = 38.1 bits (87), Expect = 0.020
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 13/95 (13%)
Query: 266 ADIPASPCGEPEEEVGKEEEEESHSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEI 325
A I S E EEE +EEEEE +E + EE E E E G+E E+ EEE
Sbjct: 395 ATITTSLKSEGEEE--EEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEG 452
Query: 326 ELKWEKGGSGLVFYTDAQFWQEEEGDFDEQTADDW 360
++ +D + ++EE + A+DW
Sbjct: 453 DVD-----------SDEEEEEDEESSSEGLEAEDW 476
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 42.7 bits (99), Expect = 8e-04
Identities = 44/192 (22%), Positives = 88/192 (45%), Gaps = 21/192 (10%)
Query: 240 EDSETVEQEELVYTAEGEEIPQGTYLADIPASPCGEPEEEVGKEEEEESHSDEDDDRGEE 299
E+ +T EQE+ + E E++ + + + EEE+ +E+EE+ E+ R +E
Sbjct: 538 EEKKTQEQEKKTWDQE-EKMREEERMREREKKM--REEEEMMREQEEKMQEQEEKMREQE 594
Query: 300 ---WERHEALHEDVTGQERTTEQLFEEEIELKWEKGGSGLVFYTDAQFWQEEEGDFDEQT 356
WE+ E + E E+++E+E E WE+ + + W++EE EQ
Sbjct: 595 EKMWEQEEKMQEQ-------EEKMWEQE-EKMWEQEEEDKMQEQEEMMWEQEE-KMQEQE 645
Query: 357 ADDWDVDMSVYYDRDGGDKDARDSVQMR-LEQRLRDGQEDGSVIERQVGTFERHTKGIGR 415
W+ + + R+ +K +M+ E+++R+ +E E ++ E +G
Sbjct: 646 EKMWEQEEKM---REQEEKMREQEEKMQGQEEKMREQEEKMQGQEEKMREQEEKMRGQEE 702
Query: 416 KV--MERQGWAE 425
K+ E + W +
Sbjct: 703 KMWGQEEKMWGQ 714
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/116 (16%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 282 KEEEEESHSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWE---KGGSGLVF 338
+EE+ + + W++ E + E+ +ER + EEE+ + E + +
Sbjct: 532 QEEKMREEKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQEEKMQEQEEKMR 591
Query: 339 YTDAQFWQEEEGDFDEQTADDWDVDMSVYYDRDGGDKDARDSVQMRLEQRLRDGQE 394
+ + W++EE EQ W+ + ++ + ++ + E+++++ +E
Sbjct: 592 EQEEKMWEQEE-KMQEQEEKMWEQEEKMWEQEEEDKMQEQEEMMWEQEEKMQEQEE 646
Score = 31.2 bits (69), Expect = 2.4
Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 15/118 (12%)
Query: 240 EDSETVEQEELVYTAEGEEIPQGTYLADIPASPCGEPEEEVGKEEEEESHSDEDDDRGEE 299
++ + QEE ++ E + Q + D +EE E++E E+ R +E
Sbjct: 329 QEEKMWRQEERLWEQEKQMREQEQKMRD---------QEERMWEQDERLREKEERMREQE 379
Query: 300 --WERHEALHEDVTGQERTTEQLFEEEIELKWEKGGSGLVFYTDAQFWQEEEGDFDEQ 355
WE+ E + E+ +ER + EEE + E+ + + W++EE ++ +Q
Sbjct: 380 KMWEQEEKMQEEERIREREKKMREEEETMREQEE----KMQKQEENMWEQEEKEWQQQ 433
Score = 30.4 bits (67), Expect = 4.1
Identities = 35/155 (22%), Positives = 71/155 (45%), Gaps = 22/155 (14%)
Query: 277 EEEVGKEEEEESHSDEDDDRGE----EW------ERHEALHEDVTGQERTTEQLFEEEIE 326
EEE E+EE ++++ E EW E+ E L E QE+ E+++E+E +
Sbjct: 403 EEEETMREQEEKMQKQEENMWEQEEKEWQQQRLPEQKEKLWEQEKMQEQ-EEKIWEQEEK 461
Query: 327 LKWEKGGSG---------LVFYTDAQFWQEEEGDFDEQTADDWDVDMSVY-YDRDGGDKD 376
++ ++ G + + Q W++EE +Q WD + ++ D +K+
Sbjct: 462 IRDQEEMWGQEKKMWRQEKMREQEDQMWEQEE-KMRDQEQKMWDQEERMWEQDERLREKE 520
Query: 377 ARDSVQMRLEQRLRDGQEDGSVIERQVGTFERHTK 411
R Q ++ Q+ +E+ E++ T+++ K
Sbjct: 521 ERMREQKKMWQQEEKMREEKKTQEQEKKTWDQEEK 555
Score = 29.6 bits (65), Expect = 7.1
Identities = 34/180 (18%), Positives = 73/180 (40%), Gaps = 26/180 (14%)
Query: 239 YEDSETVEQEELVYTAEGEEIPQGTYLADIPASPCGEPEEEVGKEEEEESHSDEDDDRGE 298
+E + EQEE ++ E E+I + EE G+E++ + +
Sbjct: 443 WEQEKMQEQEEKIWEQE-EKIR--------------DQEEMWGQEKKMWRQEKMREQEDQ 487
Query: 299 EWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGSGLVFYTDAQFWQE-----EEGDFD 353
WE+ E + + E+++E++ L+ ++ + WQ+ EE
Sbjct: 488 MWEQEEKMRDQEQKMWDQEERMWEQDERLREKEER----MREQKKMWQQEEKMREEKKTQ 543
Query: 354 EQTADDWDVDMSVYYDR--DGGDKDARDSVQMRLEQRLRDGQEDGSVIERQVGTFERHTK 411
EQ WD + + + +K R+ +M EQ + +++ + E++ +E+ K
Sbjct: 544 EQEKKTWDQEEKMREEERMREREKKMREEEEMMREQEEKMQEQEEKMREQEEKMWEQEEK 603
Score = 29.3 bits (64), Expect = 9.2
Identities = 26/126 (20%), Positives = 54/126 (42%), Gaps = 28/126 (22%)
Query: 277 EEEVGKEEEEESHSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGSGL 336
E++ +E+EE+ E+ + WE+ E + E R E+L+E+E +++
Sbjct: 301 EQKKLREQEEQMQEQEE----KMWEQEEKMREQEEKMWRQEERLWEQEKQMR-------- 348
Query: 337 VFYTDAQFWQEEEGDFDEQTADDWDVDMSVYYDRDGGDKDARDSVQMRLEQRLRDGQEDG 396
E+E +Q W+ D + +K+ R Q ++ ++ QE+
Sbjct: 349 ----------EQEQKMRDQEERMWEQDERL------REKEERMREQEKMWEQEEKMQEEE 392
Query: 397 SVIERQ 402
+ ER+
Sbjct: 393 RIRERE 398
>gi|9966799 UTP3, small subunit processome component [Homo sapiens]
Length = 479
Score = 41.2 bits (95), Expect = 0.002
Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 33/131 (25%)
Query: 277 EEEVGKEEEEE----SHSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKG 332
+EE G+EEEEE DEDD+ G G+E EE E + G
Sbjct: 71 DEEDGEEEEEEVLALDMDDEDDEDGGN-----------AGEE--------EEEENADDDG 111
Query: 333 GSGLVFYTDAQFWQEEEGDFDEQTADDWDVDMSVYYDRDGGDKDARDSVQMRLEQRLRDG 392
GS + + E + + W +YYD D G K Q E+ R+
Sbjct: 112 GSSV----------QSEAEASVDPSLSWGQRKKLYYDTDYGSKSRGRQSQQEAEEEEREE 161
Query: 393 QEDGSVIERQV 403
+E+ +I+R++
Sbjct: 162 EEEAQIIQRRL 172
>gi|225735619 mesoderm induction early response 1 isoform i [Homo
sapiens]
Length = 370
Score = 40.8 bits (94), Expect = 0.003
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 275 EPEEEVGKEEEEESHSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGS 334
E EEE +E E++ +D DD+ G E E +D +GQE T+ ++ + +
Sbjct: 23 EEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDAQ 82
Query: 335 GLV-------FYTDAQFWQEEEGDFDEQTADDWDVDMSV 366
++ F T+++ +E E D D ++DW ++ V
Sbjct: 83 EIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIMV 121
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 40.4 bits (93), Expect = 0.004
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 252 YTAEGEEIPQGTYLADIPASPCGEPEEEVGKEEEEESHSDEDDDRGEEWERHEALHEDVT 311
Y E +E P D A G EEE +E E+E D++D EE++ + EDV
Sbjct: 148 YDREDQEAP------DSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVE 201
Query: 312 GQERTTEQLFEEE 324
G E E EEE
Sbjct: 202 GDEDDDEVSEEEE 214
Score = 33.9 bits (76), Expect = 0.37
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 11/67 (16%)
Query: 238 EYEDSETVEQEELVYTAEGEEIPQGTYLADIPASPCGEPEEEVGKEEEEESHSDEDDDRG 297
E ED E E+EE + +E +G E ++EV +EEEE +ED+D
Sbjct: 178 EDEDDEDGEEEEFDEEDDEDEDVEGD-----------EDDDEVSEEEEEFGLDEEDEDED 226
Query: 298 EEWERHE 304
E+ E E
Sbjct: 227 EDEEEEE 233
Score = 33.1 bits (74), Expect = 0.64
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 11/100 (11%)
Query: 237 FEYEDSETVEQE-ELVYTAEGEEIPQGTYLADIPASPCGEPEEEVGKEEEEESHSDEDDD 295
++ ED E + + E+ E EE +G D E E + +E+E+ DEDDD
Sbjct: 148 YDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDD 207
Query: 296 RGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGSG 335
E E L E+ ++ E+ E+GG G
Sbjct: 208 EVSEEEEEFGLDEEDEDEDEDEEE----------EEGGKG 237
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 40.4 bits (93), Expect = 0.004
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 16/166 (9%)
Query: 257 EEIPQGTYLADIPASPCGEPEEEVGKEEEEESHSDEDDDRGEEWERHEALHEDV--TGQE 314
EE+ Y +D G +E+ E EE +ED + EE E E+V G+E
Sbjct: 172 EEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEE 231
Query: 315 RTTEQLFEEEIELKWEKGGSGLVFYTDAQFWQEEEGDFDEQT-ADDWDVDMSVYYD---- 369
E+ EEE E + E+ + D + +EE D+D ++ A D + + D
Sbjct: 232 EEEEEEEEEEEEEEEEE-----EYEQDERDQKEEGNDYDTRSEASDSGSESVSFTDGSVR 286
Query: 370 ----RDGGDKDARDSVQMRLEQRLRDGQEDGSVIERQVGTFERHTK 411
DG D+ ++ + R + + S E G+ ++H K
Sbjct: 287 SGSGTDGSDEKKKERKRARGISPIVFDRSGSSASESYAGSEKKHEK 332
Score = 33.5 bits (75), Expect = 0.49
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 226 TGSSRRYGNVPFEYEDSETVEQEELVYTAEGEEIPQGTYLADIPASPCGEPEEEVGKEEE 285
+GSS GN E+ E +E++ E EE + D E EEE +EEE
Sbjct: 188 SGSSDEQGN---NTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEE 244
Query: 286 EESHSDEDDDRGEEWERHE 304
EE E D+R ++ E ++
Sbjct: 245 EEEEEYEQDERDQKEEGND 263
Score = 31.6 bits (70), Expect = 1.9
Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 14/153 (9%)
Query: 277 EEEVGKEEEEESH----SDEDDDRGEEWE-RHEALHEDVTGQERTTEQLFE-EEIELKWE 330
+EEV EE H S D++G E E + EDV E E E EE++ E
Sbjct: 171 KEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVD---E 227
Query: 331 KGGSGLVFYTDAQFWQEEEGDFDEQTADDWDVDMSVYYDRDGGDKDARDSVQMRLEQRLR 390
G + + +EEE + EQ D + + Y R +SV + +R
Sbjct: 228 DGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESVSF-TDGSVR 286
Query: 391 DGQ-EDGSVIERQVGTFERHTKGIGRKVMERQG 422
G DGS +++ + +GI V +R G
Sbjct: 287 SGSGTDGSDEKKKE---RKRARGISPIVFDRSG 316
>gi|156071450 nardilysin isoform a [Homo sapiens]
Length = 1219
Score = 40.0 bits (92), Expect = 0.005
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 15/99 (15%)
Query: 233 GNVPFEYEDSETVEQEELVYTAEGEEIPQGTYLADIPASPCGEPEEEVGKEEEEESHSDE 292
GN + E+ E E+EE G EI E ++E G ++E+E +
Sbjct: 138 GNTTDDEEEEEVEEEEEDDDEDSGAEI---------------EDDDEEGFDDEDEFDDEH 182
Query: 293 DDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEK 331
DDD E E L E +++TTE+ + + L W K
Sbjct: 183 DDDLDTEDNELEELEERAEARKKTTEKQQLQSLFLLWSK 221
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 40.0 bits (92), Expect = 0.005
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 23/137 (16%)
Query: 271 SPCGEPEEEVGK-----EEEEESHSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEI 325
SP +PE+++ K EEEEE +E+++ GEE E + +D G + +EE
Sbjct: 1338 SPGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDGAKSQE----KEEP 1393
Query: 326 ELKWEKGGSGLVFYTDAQFWQEEEGDFDEQTADDWDVDMSVYYDRDGGDKDARDSVQMRL 385
E+ EK S + EEE + DE+ + + D +D D D +S ++
Sbjct: 1394 EISTEKEDSARLDD------HEEEEEEDEEPSHNED------HDADDEDDSHMESAEVEK 1441
Query: 386 EQRLRDGQEDGSVIERQ 402
E+ R+ ++ V+E Q
Sbjct: 1442 EELPRESFKE--VLENQ 1456
Score = 35.4 bits (80), Expect = 0.13
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 265 LADIPASPCGEPEEEVGKEEEEESHSDEDDDRGEEWERHEALHEDV 310
L ++ E EEE +EEEEE +E+D+ EE E E E++
Sbjct: 1061 LLELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENI 1106
Score = 35.0 bits (79), Expect = 0.17
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Query: 238 EYEDSETVEQEELVYTAEGEEIPQGTYLADIPASPCGEPEEEVGKEEEEESHSDEDDDRG 297
E E+ E E+EE EGEE G + P + +EE E+E + DD
Sbjct: 1351 EEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDGAKSQEKEEPEISTEKEDSARLDDHEE 1410
Query: 298 EEWERHEALH-EDVTGQERTTEQLFEEEIE 326
EE E E H ED + + E+E
Sbjct: 1411 EEEEDEEPSHNEDHDADDEDDSHMESAEVE 1440
Score = 29.6 bits (65), Expect = 7.1
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 243 ETVEQEELVYTAEGEEIP-----QGTYLADIPASPC-GEPEE--EVGKE--EEEESHSDE 292
E EQE L A + P + YL + P GE + E+ KE EEEE DE
Sbjct: 1019 EKEEQEILSTRANSRQSPAKVQSKNKYLHSPESRPVTGERGQLLELSKESSEEEEEEEDE 1078
Query: 293 DDDRGEEWERHEALHEDVTGQERTTEQL 320
+++ EE E + E+ +E E +
Sbjct: 1079 EEEEEEEEEEEDEEEEEEEEEEEEEENI 1106
>gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member E isoform 1 [Homo sapiens]
Length = 268
Score = 40.0 bits (92), Expect = 0.005
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 23/130 (17%)
Query: 275 EPEEEVGKEEEEESHSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGS 334
+ E+ + EEE D D+D EE E E +E E+ E+E E + E G
Sbjct: 149 DQEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSE 208
Query: 335 --------GLVFYTDAQFWQEEEGDFDEQTADDWDVDMSVYYDRDGGDKDARDSVQMRLE 386
GL + + Q+EE D D Y +G +++ + +R E
Sbjct: 209 LGEGEEEVGLSYLMKEEI-QDEEDDDD--------------YVEEGEEEEEEEEGGLRGE 253
Query: 387 QRLRDGQEDG 396
+R RD ++DG
Sbjct: 254 KRKRDAEDDG 263
Score = 38.9 bits (89), Expect = 0.012
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
Query: 237 FEYEDSETVEQEELVYTAEGEEIPQGTYLADIPASPCGEPEEEVGKEEEEESHSDEDDDR 296
F+ ED+E + EE +G+E + + P G EEE +EEE+E +++D+
Sbjct: 148 FDQEDNEAPDSEE-EDDEDGDEDDEEEEENEA-GPPEGYEEEEEEEEEEDEDEDEDEDEA 205
Query: 297 GEEWERHE-------ALHEDVTGQERTTEQLFEEEIELKWEKGG-SGLVFYTDAQFWQEE 348
G E E + E++ +E + + E E E + E+GG G DA+ EE
Sbjct: 206 GSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRKRDAEDDGEE 265
Query: 349 EGD 351
E D
Sbjct: 266 EDD 268
>gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32
family, member E isoform 2 [Homo sapiens]
Length = 227
Score = 40.0 bits (92), Expect = 0.005
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 23/130 (17%)
Query: 275 EPEEEVGKEEEEESHSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGS 334
+ E+ + EEE D D+D EE E E +E E+ E+E E + E G
Sbjct: 108 DQEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSE 167
Query: 335 --------GLVFYTDAQFWQEEEGDFDEQTADDWDVDMSVYYDRDGGDKDARDSVQMRLE 386
GL + + Q+EE D D Y +G +++ + +R E
Sbjct: 168 LGEGEEEVGLSYLMKEEI-QDEEDDDD--------------YVEEGEEEEEEEEGGLRGE 212
Query: 387 QRLRDGQEDG 396
+R RD ++DG
Sbjct: 213 KRKRDAEDDG 222
Score = 38.9 bits (89), Expect = 0.012
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
Query: 237 FEYEDSETVEQEELVYTAEGEEIPQGTYLADIPASPCGEPEEEVGKEEEEESHSDEDDDR 296
F+ ED+E + EE +G+E + + P G EEE +EEE+E +++D+
Sbjct: 107 FDQEDNEAPDSEE-EDDEDGDEDDEEEEENEA-GPPEGYEEEEEEEEEEDEDEDEDEDEA 164
Query: 297 GEEWERHE-------ALHEDVTGQERTTEQLFEEEIELKWEKGG-SGLVFYTDAQFWQEE 348
G E E + E++ +E + + E E E + E+GG G DA+ EE
Sbjct: 165 GSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRKRDAEDDGEE 224
Query: 349 EGD 351
E D
Sbjct: 225 EDD 227
>gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32
family, member E isoform 3 [Homo sapiens]
Length = 220
Score = 40.0 bits (92), Expect = 0.005
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 23/130 (17%)
Query: 275 EPEEEVGKEEEEESHSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGS 334
+ E+ + EEE D D+D EE E E +E E+ E+E E + E G
Sbjct: 101 DQEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSE 160
Query: 335 --------GLVFYTDAQFWQEEEGDFDEQTADDWDVDMSVYYDRDGGDKDARDSVQMRLE 386
GL + + Q+EE D D Y +G +++ + +R E
Sbjct: 161 LGEGEEEVGLSYLMKEEI-QDEEDDDD--------------YVEEGEEEEEEEEGGLRGE 205
Query: 387 QRLRDGQEDG 396
+R RD ++DG
Sbjct: 206 KRKRDAEDDG 215
Score = 38.9 bits (89), Expect = 0.012
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
Query: 237 FEYEDSETVEQEELVYTAEGEEIPQGTYLADIPASPCGEPEEEVGKEEEEESHSDEDDDR 296
F+ ED+E + EE +G+E + + P G EEE +EEE+E +++D+
Sbjct: 100 FDQEDNEAPDSEE-EDDEDGDEDDEEEEENEA-GPPEGYEEEEEEEEEEDEDEDEDEDEA 157
Query: 297 GEEWERHE-------ALHEDVTGQERTTEQLFEEEIELKWEKGG-SGLVFYTDAQFWQEE 348
G E E + E++ +E + + E E E + E+GG G DA+ EE
Sbjct: 158 GSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRKRDAEDDGEE 217
Query: 349 EGD 351
E D
Sbjct: 218 EDD 220
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 39.7 bits (91), Expect = 0.007
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 275 EPEEEVGKEEEEESHSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGS 334
E +E + EEEEE +E+ + E E E E+ G+E+ E+ EE+ + K EK
Sbjct: 2238 EKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKE 2297
Query: 335 GL-----VFYTDAQFWQEEEGDF---DEQTADDWDVDMSVYYDRDGGDKDARDSVQMRLE 386
+ VF + EEE + +E+ + ++ V +++ K+ + +Q +
Sbjct: 2298 EVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCSLEEEVDREKEILKKEKQFKLQEQRR 2357
Query: 387 QRLRDGQEDGSVI 399
+ LR + S++
Sbjct: 2358 KSLRGRERVLSIL 2370
Score = 33.5 bits (75), Expect = 0.49
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 229 SRRYGNVPFEYEDSETVEQEELV-----YTAEGEEIPQGTYLADIPASPCGEPEEEVGKE 283
+R++ V + E+ +E+EE++ + +E +G D P +EV
Sbjct: 2168 ARKHSEVILDDEEEGGIEEEEVIPFLKRRWRKRKEAKRG----DKPKEKFSSQVDEV--- 2220
Query: 284 EEEESHSDEDDDRGEEWERHEAL-----HEDVTGQERTTEQLFEEEIELKWEKGGSGLVF 338
E EE S+E + +E E+ E+L E +ER E++ EEE E K E+ G
Sbjct: 2221 ESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGE---- 2276
Query: 339 YTDAQFWQEEE 349
+ Q +EEE
Sbjct: 2277 --EKQVEKEEE 2285
>gi|157694505 LINE-1 type transposase domain containing 1 [Homo
sapiens]
Length = 865
Score = 39.7 bits (91), Expect = 0.007
Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Query: 238 EYEDSETVEQEELVYTAEGEEIPQGTY-LADIPASPCGEPEEEVGKEEEEESHSDEDDDR 296
E ++ E E EEL A G E + T L + P G EEE EEE S +ED+
Sbjct: 375 ETQEEEFSELEELDEEASGMEDDEDTSGLEEEEEEPSGLEEEE----EEEASGLEEDEAS 430
Query: 297 GEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGSGLVF---YTDAQFWQEEEGDFD 353
G E E + +D T Q T L + + E++ G F D++ +EEEG
Sbjct: 431 GLEEEEEQTSEQDSTFQGHT---LVDAKHEVEITSDGMETTFIDSVEDSESEEEEEGKSS 487
Query: 354 E 354
E
Sbjct: 488 E 488
>gi|150378503 leiomodin 2 (cardiac) [Homo sapiens]
Length = 547
Score = 39.7 bits (91), Expect = 0.007
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 233 GNVPFEYEDSETVEQEELVYTAEGEEIPQGTYLADIPASPCGEPEEEVGKEEEEESHSDE 292
G V + E+SE EEL++T E+ + Y E EEE +EEEEE SDE
Sbjct: 90 GKVAEDKEESE----EELIFTESNSEVSEEVYT---------EEEEEESQEEEEEEDSDE 136
Query: 293 DDDRGEEWER-HEALHEDVTGQERTTEQLFEEEIE 326
++ E + + ++ D + + ++F+ +IE
Sbjct: 137 EERTIETAKGINGTVNYDSVNSDNSKPKIFKSQIE 171
Score = 30.0 bits (66), Expect = 5.4
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 273 CGEPEEEVGKEEEEESHSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKG 332
CG+ E+ + EEE ++ + + EE E E+ + +E E EEE ++ KG
Sbjct: 89 CGKVAEDKEESEEELIFTESNSEVSEEVYTEE--EEEESQEEEEEEDSDEEERTIETAKG 146
Query: 333 GSGLVFY 339
+G V Y
Sbjct: 147 INGTVNY 153
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,803,062
Number of Sequences: 37866
Number of extensions: 1271819
Number of successful extensions: 10987
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 207
Number of HSP's that attempted gapping in prelim test: 6655
Number of HSP's gapped (non-prelim): 2017
length of query: 525
length of database: 18,247,518
effective HSP length: 107
effective length of query: 418
effective length of database: 14,195,856
effective search space: 5933867808
effective search space used: 5933867808
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.