Guide to the Human Genome
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Name: BCL2L11 Sequence: fasta or formatted (198aa) NCBI GI: 20336315
Description:

BCL2-like 11 isoform 1

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Other entries for this name:
alt prot [112aa] BCL2-like 11 isoform 9
alt prot [138aa] BCL2-like 11 isoform 6
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         17           2
 C cysteine            2.0          4           1
 D aspartate           4.5          9           1
 E glutamate           5.6         11           1
 F phenylalanine       4.0          8           1
 G glycine             6.1         12           2
 H histidine           2.5          5           1
 I isoleucine          3.0          6           1
 K lysine              1.0          2           1
 L leucine             7.1         14           2
 M methionine          4.0          8           1
 N asparagine          3.0          6           2
 P proline            12.1         24           2
 Q glutamine           6.1         12           1
 R arginine           10.1         20           2
 S serine             10.6         21           3
 T threonine           3.0          6           1
 V valine              2.5          5           1
 W tryptophan          1.0          2           1
 Y tyrosine            3.0          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BCL2-like 11 isoform 1 
BCL2L11               0.517   BCL2-like 11 isoform 6 
BCL2L11               0.221   BCL2-like 11 isoform 9 
SFTPD                 0.039   pulmonary surfactant-associated protein D precursor ...
NACA                  0.039   nascent polypeptide-associated complex alpha subuni...
PDE4A                 0.036   phosphodiesterase 4A isoform 1 
LOC100291816          0.031   PREDICTED: hypothetical protein XP_002345321 
LOC100289488          0.031   PREDICTED: hypothetical protein XP_002342198 
RNF43                 0.031   ring finger protein 43 
PRB1                  0.028   proline-rich protein BstNI subfamily 1 isoform 1 pre...
PRB1                  0.028   proline-rich protein BstNI subfamily 1 isoform 3 pre...
PRB1                  0.028   proline-rich protein BstNI subfamily 1 isoform 2 pre...
COL22A1               0.028   collagen, type XXII, alpha 1 
LOC729569             0.028   PREDICTED: hypothetical protein 
COL16A1               0.028   alpha 1 type XVI collagen precursor 
COL11A1               0.026   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.026   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.026   alpha 1 type XI collagen isoform A preproprotein [Ho...
C1QA                  0.026   complement component 1, q subcomponent, A chain precu...
CUX1                  0.026   cut-like homeobox 1 isoform a 
DCST2                 0.026   DC-STAMP domain containing 2 
NFKBIL2               0.026   NF-kappa-B inhibitor-like protein 2 
WDR33                 0.026   WD repeat domain 33 isoform 1 
CHRNA4                0.026   cholinergic receptor, nicotinic, alpha 4 subunit prec...
PRB2                  0.026   proline-rich protein BstNI subfamily 2 
RSBN1L                0.026   round spermatid basic protein 1-like 
TFG                   0.026   TRK-fused 
PRB4                  0.026   proline-rich protein BstNI subfamily 4 precursor [Ho...
TFG                   0.026   TRK-fused 
COL5A1                0.023   alpha 1 type V collagen preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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