LOC646853 1264

Name: LOC646853	Sequence: fasta or formatted (90aa)		NCBI GI: 113425750
Description: PREDICTED: similar to high-mobility group nucleosomal binding domain 2		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt mRNA [90aa] PREDICTED: similar to high-mobility group nucleosomal binding dom... alt mRNA [90aa] PREDICTED: similar to high-mobility group nucleosomal binding dom...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.2 11 1 C cysteine 0.0 0 0 D aspartate 7.8 7 1 E glutamate 7.8 7 1 F phenylalanine 0.0 0 0 G glycine 12.2 11 1 H histidine 0.0 0 0 I isoleucine 0.0 0 0 K lysine 22.2 20 2 L leucine 2.2 2 1 M methionine 2.2 2 1 N asparagine 3.3 3 1 P proline 10.0 9 2 Q glutamine 3.3 3 1 R arginine 5.6 5 2 S serine 2.2 2 1 T threonine 5.6 5 1 V valine 3.3 3 1 W tryptophan 0.0 0 0 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to high-mobility group nucleosom... LOC646853 1.000 PREDICTED: similar to high-mobility group nucleosom... LOC646853 1.000 PREDICTED: similar to high-mobility group nucleosom... HMGN2 0.839 high-mobility group nucleosomal binding domain 2 [Hom... LOC729505 0.776 PREDICTED: hypothetical protein LOC729505 0.776 PREDICTED: hypothetical protein LOC729505 0.776 PREDICTED: hypothetical protein LOC648822 0.770 PREDICTED: similar to hCG2040565 LOC648822 0.770 PREDICTED: similar to hCG2040565 LOC648822 0.770 PREDICTED: similar to hCG2040565 LOC644992 0.764 PREDICTED: hypothetical protein LOC644992 0.764 PREDICTED: hypothetical protein LOC644992 0.764 PREDICTED: hypothetical protein LOC100293829 0.745 PREDICTED: similar to hCG2040565 LOC100288691 0.745 PREDICTED: similar to hCG2040565 LOC100288691 0.745 PREDICTED: hypothetical protein XP_002343066 LOC729687 0.745 PREDICTED: similar to high-mobility group nucleosom... LOC729687 0.745 PREDICTED: similar to high-mobility group nucleosom... LOC729687 0.745 PREDICTED: similar to high-mobility group nucleosom... HMGN4 0.714 high mobility group nucleosomal binding domain 4 [Ho... LOC646049 0.696 PREDICTED: hypothetical protein LOC646049 0.696 PREDICTED: hypothetical protein LOC646049 0.696 PREDICTED: hypothetical protein LOC100292625 0.683 PREDICTED: similar to hCG2040565 LOC100291244 0.683 PREDICTED: hypothetical protein XP_002348261 LOC100287582 0.683 PREDICTED: hypothetical protein XP_002342251 LOC645263 0.665 PREDICTED: hypothetical protein LOC645263 0.665 PREDICTED: hypothetical protein LOC645263 0.665 PREDICTED: hypothetical protein LOC100128372 0.547 PREDICTED: similar to hCG2040192 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.