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Name: MAGEE2 Sequence: fasta or formatted (523aa) NCBI GI: 20162570
Description:

melanoma antigen family E, 2

Referenced in:

Melanoma Antigen Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         34           1
 C cysteine            1.0          5           1
 D aspartate           5.9         31           1
 E glutamate           9.6         50           3
 F phenylalanine       3.6         19           2
 G glycine             4.2         22           1
 H histidine           2.3         12           2
 I isoleucine          4.8         25           1
 K lysine              3.6         19           1
 L leucine            11.9         62           3
 M methionine          3.6         19           1
 N asparagine          4.8         25           2
 P proline             4.8         25           1
 Q glutamine           4.8         25           2
 R arginine            7.1         37           2
 S serine              6.5         34           1
 T threonine           4.6         24           2
 V valine              5.7         30           2
 W tryptophan          1.9         10           1
 Y tyrosine            2.9         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   melanoma antigen family E, 2 
MAGEE1                0.333   melanoma antigen family E, 1 
NDNL2                 0.131   necdin-like 2 
MAGEB18               0.125   melanoma antigen family B, 18 
MAGEL2                0.125   MAGE-like protein 2 
MAGEB16               0.120   melanoma antigen family B, 16 
TRO                   0.119   trophinin isoform 5 
TRO                   0.119   trophinin isoform 2 
TRO                   0.119   trophinin isoform 2 
MAGED2                0.118   melanoma antigen family D, 2 
MAGED2                0.118   melanoma antigen family D, 2 
MAGED2                0.118   melanoma antigen family D, 2 
MAGED1                0.117   melanoma antigen family D, 1 isoform a 
MAGED1                0.117   melanoma antigen family D, 1 isoform b 
MAGED1                0.117   melanoma antigen family D, 1 isoform b 
MAGEF1                0.116   melanoma antigen family F, 1 
MAGEB2                0.115   melanoma antigen family B, 2 
MAGED4B               0.113   melanoma antigen family D, 4B isoform 2 
MAGED4B               0.113   melanoma antigen family D, 4B isoform 1 
MAGED4B               0.113   melanoma antigen family D, 4B isoform 1 
MAGED4                0.113   melanoma antigen family D, 4 
MAGEB10               0.112   melanoma antigen family B, 10 
MAGEA10               0.111   melanoma antigen family A, 10 
MAGEA10               0.111   melanoma antigen family A, 10 
MAGEA11               0.110   melanoma antigen family A, 11 isoform b 
MAGEA11               0.110   melanoma antigen family A, 11 isoform a 
MAGEB3                0.109   melanoma antigen family B, 3 
MAGEB17               0.105   PREDICTED: melanoma antigen family B, 17 
MAGEB17               0.105   PREDICTED: melanoma antigen family B, 17 
MAGEB17               0.105   PREDICTED: melanoma antigen family B, 17 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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