TRO 25003

Name: TRO	Sequence: fasta or formatted (706aa)		NCBI GI: 29540541
Description: trophinin isoform 2		Referenced in: Melanoma Antigen Family
Other entries for this name: alt mRNA [706aa] trophinin isoform 2 alt prot [1431aa] trophinin isoform 5
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.6 89 3 C cysteine 0.6 4 1 D aspartate 3.1 22 2 E glutamate 5.8 41 2 F phenylalanine 1.4 10 2 G glycine 4.1 29 2 H histidine 1.7 12 1 I isoleucine 6.1 43 2 K lysine 9.1 64 2 L leucine 7.5 53 2 M methionine 1.6 11 1 N asparagine 3.8 27 1 P proline 6.7 47 3 Q glutamine 5.2 37 1 R arginine 5.7 40 2 S serine 7.9 56 2 T threonine 7.8 55 2 V valine 6.2 44 2 W tryptophan 0.8 6 1 Y tyrosine 2.3 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 trophinin isoform 2 TRO 1.000 trophinin isoform 2 TRO 0.929 trophinin isoform 5 MAGED2 0.275 melanoma antigen family D, 2 MAGED2 0.275 melanoma antigen family D, 2 MAGED2 0.275 melanoma antigen family D, 2 MAGED4B 0.251 melanoma antigen family D, 4B isoform 2 MAGED4B 0.251 melanoma antigen family D, 4B isoform 1 MAGED4B 0.251 melanoma antigen family D, 4B isoform 1 MAGED4 0.251 melanoma antigen family D, 4 MAGED1 0.236 melanoma antigen family D, 1 isoform a MAGED1 0.236 melanoma antigen family D, 1 isoform b MAGED1 0.236 melanoma antigen family D, 1 isoform b NDNL2 0.133 necdin-like 2 MAGEF1 0.127 melanoma antigen family F, 1 MAGEE1 0.126 melanoma antigen family E, 1 MAGEL2 0.125 MAGE-like protein 2 NDN 0.117 necdin MAGEB4 0.117 melanoma antigen family B, 4 MAGEB10 0.117 melanoma antigen family B, 10 MAGEB3 0.114 melanoma antigen family B, 3 MAGEB16 0.112 melanoma antigen family B, 16 MAGEB17 0.109 PREDICTED: melanoma antigen family B, 17 MAGEB17 0.109 PREDICTED: melanoma antigen family B, 17 MAGEB17 0.109 PREDICTED: melanoma antigen family B, 17 MAGEB18 0.107 melanoma antigen family B, 18 MAGEA10 0.106 melanoma antigen family A, 10 MAGEA10 0.106 melanoma antigen family A, 10 MAGEB1 0.105 melanoma antigen family B, 1 MAGEB1 0.105 melanoma antigen family B, 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.