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Search of human proteins with 19923957
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19923957 major facilitator superfamily domain containing 3
[Homo sapiens]
(412 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19923957 major facilitator superfamily domain containing 3 [H... 810 0.0
gi|4757708 acetyl-coenzyme A transporter [Homo sapiens] 66 5e-11
gi|52353302 transmembrane protein 198 [Homo sapiens] 37 0.025
gi|168229226 hypothetical protein LOC401399 [Homo sapiens] 33 0.47
gi|166064062 tumor suppressing subtransferable candidate 5 [Homo... 33 0.62
gi|166064060 tumor suppressing subtransferable candidate 5 [Homo... 33 0.62
gi|64368472 cytochrome P450, family 2, subfamily W, polypeptide ... 32 0.80
gi|25914749 ATP-binding cassette, sub-family C, member 10 [Homo ... 32 1.1
gi|66346698 alpha-N-acetylglucosaminidase precursor [Homo sapiens] 32 1.1
gi|194239659 transmembrane and coiled-coil domains 4 [Homo sapiens] 32 1.1
gi|46488919 astrotactin 2 isoform c [Homo sapiens] 31 2.3
gi|46488917 astrotactin 2 isoform b [Homo sapiens] 31 2.3
gi|46488915 astrotactin 2 isoform a [Homo sapiens] 31 2.3
gi|239755157 PREDICTED: similar to astrotactin 2 [Homo sapiens] 31 2.3
gi|150417984 ATP-binding cassette, sub-family A, member 7 [Homo ... 31 2.3
gi|42475555 monocarboxylate transporter 13 [Homo sapiens] 30 3.1
gi|239755836 PREDICTED: hypothetical protein LOC440104 isoform 1... 30 3.1
gi|239750337 PREDICTED: similar to RIKEN cDNA 1110012D08 [Homo s... 30 3.1
gi|239744643 PREDICTED: hypothetical protein LOC440104 [Homo sap... 30 3.1
gi|170784861 hedgehog acyltransferase [Homo sapiens] 30 3.1
gi|170784863 hedgehog acyltransferase [Homo sapiens] 30 3.1
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] 30 3.1
gi|169202933 PREDICTED: similar to hCG21066 [Homo sapiens] 30 5.2
gi|169203543 PREDICTED: similar to hCG21066 [Homo sapiens] 30 5.2
gi|239744413 PREDICTED: hypothetical protein LOC390213 [Homo sap... 30 5.2
gi|11072101 rhomboid domain containing 3 [Homo sapiens] 30 5.2
gi|226529806 histone deacetylase 10 isoform 2 [Homo sapiens] 30 5.2
gi|20070354 histone deacetylase 10 isoform 1 [Homo sapiens] 30 5.2
gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens] 29 6.8
gi|23503293 solute carrier family 16, member 11 [Homo sapiens] 29 8.9
>gi|19923957 major facilitator superfamily domain containing 3 [Homo
sapiens]
Length = 412
Score = 810 bits (2092), Expect = 0.0
Identities = 412/412 (100%), Positives = 412/412 (100%)
Query: 1 MRGKLLPLAGLYLVQGLPYGLQSGLLPVLLRAGGLSLTRVGLAKVLYAPWLLKLAWAPLV 60
MRGKLLPLAGLYLVQGLPYGLQSGLLPVLLRAGGLSLTRVGLAKVLYAPWLLKLAWAPLV
Sbjct: 1 MRGKLLPLAGLYLVQGLPYGLQSGLLPVLLRAGGLSLTRVGLAKVLYAPWLLKLAWAPLV 60
Query: 61 DAQGSARAWVTRSTAGLGLVCGLLAGLPPPGAGQAGLPAAVAGLLLLLNLGAAMQDVALD 120
DAQGSARAWVTRSTAGLGLVCGLLAGLPPPGAGQAGLPAAVAGLLLLLNLGAAMQDVALD
Sbjct: 61 DAQGSARAWVTRSTAGLGLVCGLLAGLPPPGAGQAGLPAAVAGLLLLLNLGAAMQDVALD 120
Query: 121 ALAVQLLEPAELGPGNTVQVVAYKLGAALAGGALLALLPTFSWPQLFLLLAATYWLAAAL 180
ALAVQLLEPAELGPGNTVQVVAYKLGAALAGGALLALLPTFSWPQLFLLLAATYWLAAAL
Sbjct: 121 ALAVQLLEPAELGPGNTVQVVAYKLGAALAGGALLALLPTFSWPQLFLLLAATYWLAAAL 180
Query: 181 AWAAPALRRLPQQPPSEQRPHTAHLLRDVLAVPGTVWTAGFVLTYKLGEQGASSLFPLLL 240
AWAAPALRRLPQQPPSEQRPHTAHLLRDVLAVPGTVWTAGFVLTYKLGEQGASSLFPLLL
Sbjct: 181 AWAAPALRRLPQQPPSEQRPHTAHLLRDVLAVPGTVWTAGFVLTYKLGEQGASSLFPLLL 240
Query: 241 LDHGVSAPELGLWNGVGAVVCSIAGSSLGGTLLAKHWKLLPLLRSVLRFRLGGLACQTAL 300
LDHGVSAPELGLWNGVGAVVCSIAGSSLGGTLLAKHWKLLPLLRSVLRFRLGGLACQTAL
Sbjct: 241 LDHGVSAPELGLWNGVGAVVCSIAGSSLGGTLLAKHWKLLPLLRSVLRFRLGGLACQTAL 300
Query: 301 VFHLDTLGASMDAGTILRGSALLSLCLQHFLGGLVTTVTFTGMMRCSQLAPRALQATHYS 360
VFHLDTLGASMDAGTILRGSALLSLCLQHFLGGLVTTVTFTGMMRCSQLAPRALQATHYS
Sbjct: 301 VFHLDTLGASMDAGTILRGSALLSLCLQHFLGGLVTTVTFTGMMRCSQLAPRALQATHYS 360
Query: 361 LLATLELLGKLLLGTLAGGLADGLGPHPCFLLLLILSAFPVLYLDLAPSTFL 412
LLATLELLGKLLLGTLAGGLADGLGPHPCFLLLLILSAFPVLYLDLAPSTFL
Sbjct: 361 LLATLELLGKLLLGTLAGGLADGLGPHPCFLLLLILSAFPVLYLDLAPSTFL 412
>gi|4757708 acetyl-coenzyme A transporter [Homo sapiens]
Length = 549
Score = 66.2 bits (160), Expect = 5e-11
Identities = 72/280 (25%), Positives = 116/280 (41%), Gaps = 39/280 (13%)
Query: 5 LLPLAGLYLVQGLPYGLQSGLLPVLLRAGGLSLTRVGLAKVLYAPWLLKLAWAPLVDAQ- 63
+L L LY++QG+P GL +G +P++L++ +S T ++ P+ LKL WAPLVDA
Sbjct: 75 ILLLLFLYVLQGIPLGL-AGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPLVDAVY 133
Query: 64 ----GSARAWVTRSTAGLGLVCGLLAGLPPPGAGQAG--LPAAVA--GLLLLLNLGAAMQ 115
G ++W+ + LGL L+ G P +A L AA Q
Sbjct: 134 VKNFGRRKSWLVPTQYILGLFMIYLSTQVDRLLGNTDDRTPDVIALTVAFFLFEFLAATQ 193
Query: 116 DVALDALAVQLLEPAELGPGNTVQVVAYKLGAALAGGALLALLPT--------------- 160
D+A+D A+ +L +G +T V G L LAL
Sbjct: 194 DIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRFQPQPRG 253
Query: 161 --------FSWPQLFLLLAATYWLAAALAWAAPALRRLPQQPPSEQRPHTAHLLRDVLAV 212
F W +FL+ AL + + ++ ++ T LL ++ +
Sbjct: 254 IVTLSDFLFFWGTVFLITTT----LVALLKKENEVSVVKEE--TQGITDTYKLLFAIIKM 307
Query: 213 PGTVWTAGFVLTYKLGEQGASSLFPLLLLDHGVSAPELGL 252
P + +LT K+G A ++ L L++ GV L L
Sbjct: 308 PAVLTFCLLILTAKIGFSAADAVTGLKLVEEGVPKEHLAL 347
>gi|52353302 transmembrane protein 198 [Homo sapiens]
Length = 360
Score = 37.4 bits (85), Expect = 0.025
Identities = 42/109 (38%), Positives = 49/109 (44%), Gaps = 21/109 (19%)
Query: 76 GLGLVCGLLAGLPPPGAGQAGLPAAVAGLLLLLNLGAAMQDVALDALAVQLLEPAELGPG 135
G+GL+CGL+A L GL + GLLL L L AA AL A + GP
Sbjct: 101 GIGLLCGLVAML----VRSVGL--FLVGLLLGLLLAAA----ALLGSAPYYQPGSVWGP- 149
Query: 136 NTVQVVAYKLGAALAGGALLALLPTFSWPQLFLLLAATYWLAAALAWAA 184
LG L GG L ALL T WP+ LA AA +A AA
Sbjct: 150 ---------LGLLLGGGLLCALL-TLRWPRPLTTLATAVTGAALIATAA 188
>gi|168229226 hypothetical protein LOC401399 [Homo sapiens]
Length = 899
Score = 33.1 bits (74), Expect = 0.47
Identities = 40/105 (38%), Positives = 44/105 (41%), Gaps = 20/105 (19%)
Query: 54 LAWAPLVDAQGSARAWVTRSTAGLGLVCGLLAGLPPPGAGQAGLPAAVAGLLLL-LNLGA 112
LAW L D A AGLGL C LLA PP P +A LLLL L L A
Sbjct: 431 LAWLLLQDLPLPCLA------AGLGLACLLLARPRPPRC-----PTGLAALLLLGLGLAA 479
Query: 113 AMQDVALDALAVQLLEPAELGPGNTVQVVAYKLGAALAGGALLAL 157
A AL + A + L P L + AA G LLAL
Sbjct: 480 A---AALGSAAHRPLRPLRLASRG-----LHAFLAAFLSGLLLAL 516
>gi|166064062 tumor suppressing subtransferable candidate 5 [Homo
sapiens]
Length = 424
Score = 32.7 bits (73), Expect = 0.62
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 14/89 (15%)
Query: 245 VSAPE--------LGLWNGVGAVVCSIAGSSLGGTLLAKHWKLLPLLRSVLRFRLGGLAC 296
+SAPE LGL GVG ++ GS LGGTL++ + P + + L LG +
Sbjct: 143 LSAPEERPAALGRLGLCFGVGVIL----GSLLGGTLVSAYGIQCPAILAALATLLGAVLS 198
Query: 297 QTALVFHLDTLGASMDAGTILRGSALLSL 325
T + T GA DA L G S+
Sbjct: 199 FTCI--PASTKGAKTDAQAPLPGGPRASV 225
>gi|166064060 tumor suppressing subtransferable candidate 5 [Homo
sapiens]
Length = 424
Score = 32.7 bits (73), Expect = 0.62
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 14/89 (15%)
Query: 245 VSAPE--------LGLWNGVGAVVCSIAGSSLGGTLLAKHWKLLPLLRSVLRFRLGGLAC 296
+SAPE LGL GVG ++ GS LGGTL++ + P + + L LG +
Sbjct: 143 LSAPEERPAALGRLGLCFGVGVIL----GSLLGGTLVSAYGIQCPAILAALATLLGAVLS 198
Query: 297 QTALVFHLDTLGASMDAGTILRGSALLSL 325
T + T GA DA L G S+
Sbjct: 199 FTCI--PASTKGAKTDAQAPLPGGPRASV 225
>gi|64368472 cytochrome P450, family 2, subfamily W, polypeptide 1
[Homo sapiens]
Length = 490
Score = 32.3 bits (72), Expect = 0.80
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 261 CSIAGSSLGGTLLAKHWKLLPLLRSVLRFRLGGLACQTALVFH----LDTLGASMDAGTI 316
C+ A + LGG LL K ++PLL SVL L QT F+ LD G +
Sbjct: 367 CTAADTQLGGFLLPKGTPVIPLLTSVL---LDETQWQTPGQFNPGHFLDANGHFVKREAF 423
Query: 317 LRGSALLSLCLQHFLGGLVTTVTFTGMMRCSQLAP 351
L SA +C+ L + F G+++ +L P
Sbjct: 424 LPFSAGRRVCVGERLARTELFLLFAGLLQRYRLLP 458
>gi|25914749 ATP-binding cassette, sub-family C, member 10 [Homo
sapiens]
Length = 1464
Score = 32.0 bits (71), Expect = 1.1
Identities = 60/185 (32%), Positives = 69/185 (37%), Gaps = 34/185 (18%)
Query: 69 WVTRSTAGLGL-VCGLLAGLP---PPGAGQ--------AGLPAAVAGLLLLLNL------ 110
W R A L V LL LP PPGAG AG AAVA + L L
Sbjct: 23 WRLRLAASFLLSVFPLLDLLPVALPPGAGPGPIGLEVLAGCVAAVAWISHSLALWVLAHS 82
Query: 111 --GAAMQDVALDALAVQLLEPAELGPGNTVQVVAYKLGAALAGGALLALLPTFSWPQLFL 168
G + +AL AL L PA +V L G L LLP L
Sbjct: 83 PHGHSRGPLAL-ALVALLPAPA---------LVLTVLWHCQRGTLLPPLLPGPMARLCLL 132
Query: 169 LLAATYWLAAALAWAAPALRRLP--QQP--PSEQRPHTAHLLRDVLAVPGTVWTAGFVLT 224
+L LA AL WAAP R P Q+P P +Q P A L+ W A +
Sbjct: 133 ILQLAALLAYALGWAAPGGPREPWAQEPLLPEDQEPEVAEDGESWLSRFSYAWLAPLLAR 192
Query: 225 YKLGE 229
GE
Sbjct: 193 GACGE 197
>gi|66346698 alpha-N-acetylglucosaminidase precursor [Homo sapiens]
Length = 743
Score = 32.0 bits (71), Expect = 1.1
Identities = 18/37 (48%), Positives = 21/37 (56%)
Query: 99 AAVAGLLLLLNLGAAMQDVALDALAVQLLEPAELGPG 135
AA G+LLL G A D A +A AV+ L LGPG
Sbjct: 7 AAAVGVLLLAGAGGAAGDEAREAAAVRALVARLLGPG 43
>gi|194239659 transmembrane and coiled-coil domains 4 [Homo sapiens]
Length = 634
Score = 32.0 bits (71), Expect = 1.1
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 18/123 (14%)
Query: 73 STAGLGLVCGLLAGLPPPGAGQAGLPAAVAGLLLLLNLGAAMQDVALDALAVQLLEPAEL 132
+T G G V G+ GL P L AA A ++ AA+ A A+ L A
Sbjct: 196 ATVGGGTVIGVTGGLAAP------LVAAGAATIIGSAGAAALGSAAGIAIMTSLFGAAGA 249
Query: 133 GPGNTVQVVAYKLGAALAGGALLALLPTFSWPQLFLLLAATYWLAA------ALAWAAPA 186
G + YK+ + LP QL + +A T WLA+ + WAA A
Sbjct: 250 G------LTGYKMKKRVGAIEEFTFLPLTEGRQLHITIAVTGWLASGKYRTFSAPWAALA 303
Query: 187 LRR 189
R
Sbjct: 304 HSR 306
>gi|46488919 astrotactin 2 isoform c [Homo sapiens]
Length = 1339
Score = 30.8 bits (68), Expect = 2.3
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 16/93 (17%)
Query: 121 ALAVQLLEPAELGPGNTVQVVAYKLGAALAGGALLALLPTFSWPQLFLLLAATYWLAAAL 180
A A L EP+E+ V+ + L ++ GG + LL LLL T L A
Sbjct: 186 ATAPTLQEPSEI-----VEEQMHILHISVMGGLIALLL---------LLLVFTVALYAQR 231
Query: 181 AWAAPALRRLPQQPPSEQRPHTAHLLRDVLAVP 213
W RR+PQ+ S + H H + VL P
Sbjct: 232 RWQKR--RRIPQKSASTEATHEIHYIPSVLLGP 262
>gi|46488917 astrotactin 2 isoform b [Homo sapiens]
Length = 1335
Score = 30.8 bits (68), Expect = 2.3
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 16/93 (17%)
Query: 121 ALAVQLLEPAELGPGNTVQVVAYKLGAALAGGALLALLPTFSWPQLFLLLAATYWLAAAL 180
A A L EP+E+ V+ + L ++ GG + LL LLL T L A
Sbjct: 186 ATAPTLQEPSEI-----VEEQMHILHISVMGGLIALLL---------LLLVFTVALYAQR 231
Query: 181 AWAAPALRRLPQQPPSEQRPHTAHLLRDVLAVP 213
W RR+PQ+ S + H H + VL P
Sbjct: 232 RWQKR--RRIPQKSASTEATHEIHYIPSVLLGP 262
>gi|46488915 astrotactin 2 isoform a [Homo sapiens]
Length = 1288
Score = 30.8 bits (68), Expect = 2.3
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 16/93 (17%)
Query: 121 ALAVQLLEPAELGPGNTVQVVAYKLGAALAGGALLALLPTFSWPQLFLLLAATYWLAAAL 180
A A L EP+E+ V+ + L ++ GG + LL LLL T L A
Sbjct: 186 ATAPTLQEPSEI-----VEEQMHILHISVMGGLIALLL---------LLLVFTVALYAQR 231
Query: 181 AWAAPALRRLPQQPPSEQRPHTAHLLRDVLAVP 213
W RR+PQ+ S + H H + VL P
Sbjct: 232 RWQKR--RRIPQKSASTEATHEIHYIPSVLLGP 262
>gi|239755157 PREDICTED: similar to astrotactin 2 [Homo sapiens]
Length = 451
Score = 30.8 bits (68), Expect = 2.3
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 16/93 (17%)
Query: 121 ALAVQLLEPAELGPGNTVQVVAYKLGAALAGGALLALLPTFSWPQLFLLLAATYWLAAAL 180
A A L EP+E+ V+ + L ++ GG + LL LLL T L A
Sbjct: 38 ATAPTLQEPSEI-----VEEQMHILHISVMGGLIALLL---------LLLVFTVALYAQR 83
Query: 181 AWAAPALRRLPQQPPSEQRPHTAHLLRDVLAVP 213
W RR+PQ+ S + H H + VL P
Sbjct: 84 RWQKR--RRIPQKSASTEATHEIHYIPSVLLGP 114
>gi|150417984 ATP-binding cassette, sub-family A, member 7 [Homo
sapiens]
Length = 2146
Score = 30.8 bits (68), Expect = 2.3
Identities = 35/112 (31%), Positives = 42/112 (37%), Gaps = 6/112 (5%)
Query: 22 QSGLLPVLLRAGGLSLTRVGLAKV-LYAPWLLKLAWAPLVDAQGSARAWVTRSTAGLGLV 80
QS LL L+ GLA LY P++L +AW + A G A + S G
Sbjct: 642 QSFLLSAFFSRANLAAACGGLAYFSLYLPYVLCVAWRDRLPAGGRVAASLL-SPVAFGFG 700
Query: 81 CGLLAGLPPPGAG----QAGLPAAVAGLLLLLNLGAAMQDVALDALAVQLLE 128
C LA L G G G L G + D AL LA LE
Sbjct: 701 CESLALLEEQGEGAQWHNVGTRPTADVFSLAQVSGLLLLDAALYGLATWYLE 752
>gi|42475555 monocarboxylate transporter 13 [Homo sapiens]
Length = 426
Score = 30.4 bits (67), Expect = 3.1
Identities = 61/204 (29%), Positives = 76/204 (37%), Gaps = 55/204 (26%)
Query: 32 AGGLSLTRVGLAKVLYAP---WLLK-LAWAPLVDAQGSARAWVTRSTAGLGLV-CGLLAG 86
A GL+LT VGL+ +AP WLL AW +GS + S L LV CG L
Sbjct: 140 ATGLALTGVGLSSFTFAPFFQWLLSHYAW------RGSL---LLVSALSLHLVACGAL-- 188
Query: 87 LPPPGAGQ---AGLPAAVAGLLL-------------LLNLG---------AAMQDVALDA 121
L PP + G P A LL L+N G A +QD+ D
Sbjct: 189 LRPPSLAEDPAVGGPRAQLTSLLHHGPFLRYTVALTLINTGYFIPYLHLVAHLQDLDWDP 248
Query: 122 LAVQLLEPAELGPGNTVQVVAYKLGAALAG-------------GALLALLPTFSWPQLFL 168
L L +VV+ LG A+ G G LAL P P +
Sbjct: 249 LPAAFLLSVVAISDLVGRVVSGWLGDAVPGPVTRLLMLWTTLTGVSLALFPVAQAPTALV 308
Query: 169 LLAATYWLAAALAWAAPALRRLPQ 192
LA Y + A A A LP+
Sbjct: 309 ALAVAYGFTSG-ALAPLAFSVLPE 331
>gi|239755836 PREDICTED: hypothetical protein LOC440104 isoform 1
[Homo sapiens]
Length = 105
Score = 30.4 bits (67), Expect = 3.1
Identities = 32/108 (29%), Positives = 40/108 (37%), Gaps = 29/108 (26%)
Query: 101 VAGLLLLLNLGAAMQDVALDALAVQLLEPAELGPGNTVQVVAYKLGAALAGGALLALLPT 160
+ GLLL L LGA A+ EP P A+ L G ALL L T
Sbjct: 10 LTGLLLGLTLGAG---------ALLASEPIYQPPS------AWVPAGGLVGLALLGALLT 54
Query: 161 FSWPQLFLLLAATYWLAAAL--------------AWAAPALRRLPQQP 194
WP+ F +L T +A L +W L+ LP P
Sbjct: 55 LRWPRPFTVLGTTLLGSAVLVACVDYFLEGLALGSWLGQRLQTLPALP 102
>gi|239750337 PREDICTED: similar to RIKEN cDNA 1110012D08 [Homo
sapiens]
Length = 105
Score = 30.4 bits (67), Expect = 3.1
Identities = 32/108 (29%), Positives = 40/108 (37%), Gaps = 29/108 (26%)
Query: 101 VAGLLLLLNLGAAMQDVALDALAVQLLEPAELGPGNTVQVVAYKLGAALAGGALLALLPT 160
+ GLLL L LGA A+ EP P A+ L G ALL L T
Sbjct: 10 LTGLLLGLTLGAG---------ALLASEPIYQPPS------AWVPAGGLVGLALLGALLT 54
Query: 161 FSWPQLFLLLAATYWLAAAL--------------AWAAPALRRLPQQP 194
WP+ F +L T +A L +W L+ LP P
Sbjct: 55 LRWPRPFTVLGTTLLGSAVLVACVDYFLEGLALGSWLGQRLQTLPALP 102
>gi|239744643 PREDICTED: hypothetical protein LOC440104 [Homo
sapiens]
Length = 105
Score = 30.4 bits (67), Expect = 3.1
Identities = 32/108 (29%), Positives = 40/108 (37%), Gaps = 29/108 (26%)
Query: 101 VAGLLLLLNLGAAMQDVALDALAVQLLEPAELGPGNTVQVVAYKLGAALAGGALLALLPT 160
+ GLLL L LGA A+ EP P A+ L G ALL L T
Sbjct: 10 LTGLLLGLTLGAG---------ALLASEPIYQPPS------AWVPAGGLVGLALLGALLT 54
Query: 161 FSWPQLFLLLAATYWLAAAL--------------AWAAPALRRLPQQP 194
WP+ F +L T +A L +W L+ LP P
Sbjct: 55 LRWPRPFTVLGTTLLGSAVLVACVDYFLEGLALGSWLGQRLQTLPALP 102
>gi|170784861 hedgehog acyltransferase [Homo sapiens]
Length = 493
Score = 30.4 bits (67), Expect = 3.1
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 255 GVGAVVCSIAGSSLGGTLLAKH--WKLLPLLRSVLRFRLGGLACQTALVFHLDTLGASMD 312
G+G ++C + L L+ H + +PLL +V + LGGLA L F++ L
Sbjct: 247 GLGRLLCWWWLAELMAHLMYMHAIYSSIPLLETVSCWTLGGLALAQVLFFYVKYLVLFGV 306
Query: 313 AGTILRGSALLSLCLQHFLGGLVTTVTFTGMMR 345
++R L L + T +FTGM R
Sbjct: 307 PALLMRLDGLTPPALPRCVS---TMFSFTGMWR 336
>gi|170784863 hedgehog acyltransferase [Homo sapiens]
Length = 493
Score = 30.4 bits (67), Expect = 3.1
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 255 GVGAVVCSIAGSSLGGTLLAKH--WKLLPLLRSVLRFRLGGLACQTALVFHLDTLGASMD 312
G+G ++C + L L+ H + +PLL +V + LGGLA L F++ L
Sbjct: 247 GLGRLLCWWWLAELMAHLMYMHAIYSSIPLLETVSCWTLGGLALAQVLFFYVKYLVLFGV 306
Query: 313 AGTILRGSALLSLCLQHFLGGLVTTVTFTGMMR 345
++R L L + T +FTGM R
Sbjct: 307 PALLMRLDGLTPPALPRCVS---TMFSFTGMWR 336
>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
Length = 818
Score = 30.4 bits (67), Expect = 3.1
Identities = 41/151 (27%), Positives = 55/151 (36%), Gaps = 30/151 (19%)
Query: 69 WVTR--STAGLGLVCGLLAGLPPPGAGQAGLPAAVAGLLLLLNLGAAMQDVALDALAVQL 126
WV R S+AG + C PP PA +A L + + + LD+ A
Sbjct: 524 WVARRGSSAGRKVSCA------PPSMQPPAPPAELAA-----PLPSPLPEQPLDSPAAPA 572
Query: 127 LEPAELG--PG----NTVQVVAYKLGAALAGGALLALLPTFSWPQLFLLLAATYWLAAAL 180
L P+ LG PG +T + G+A G P A A
Sbjct: 573 LSPSGLGLQPGPERTSTTKSKELSPGSAQKGS-----------PGSSQGTACAGTQPGAQ 621
Query: 181 AWAAPALRRLPQQPPSEQRPHTAHLLRDVLA 211
A P P QPP++Q PHT + LA
Sbjct: 622 PGAQPGASPSPSQPPADQSPHTLRKVSKKLA 652
>gi|169202933 PREDICTED: similar to hCG21066 [Homo sapiens]
Length = 451
Score = 29.6 bits (65), Expect = 5.2
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
Query: 319 GSALLSLCLQHFLGGLVTTVTFTGMMRCSQLAPRALQATHYS 360
G LLSLC GGL+ G++RC+ LAP + A YS
Sbjct: 309 GHVLLSLCYSSQQGGLL-----VGVLRCAHLAP--MDANGYS 343
>gi|169203543 PREDICTED: similar to hCG21066 [Homo sapiens]
Length = 451
Score = 29.6 bits (65), Expect = 5.2
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
Query: 319 GSALLSLCLQHFLGGLVTTVTFTGMMRCSQLAPRALQATHYS 360
G LLSLC GGL+ G++RC+ LAP + A YS
Sbjct: 309 GHVLLSLCYSSQQGGLL-----VGVLRCAHLAP--MDANGYS 343
>gi|239744413 PREDICTED: hypothetical protein LOC390213 [Homo
sapiens]
Length = 431
Score = 29.6 bits (65), Expect = 5.2
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
Query: 319 GSALLSLCLQHFLGGLVTTVTFTGMMRCSQLAPRALQATHYS 360
G LLSLC GGL+ G++RC+ LAP + A YS
Sbjct: 289 GHVLLSLCYSSQQGGLL-----VGVLRCAHLAP--MDANGYS 323
>gi|11072101 rhomboid domain containing 3 [Homo sapiens]
Length = 386
Score = 29.6 bits (65), Expect = 5.2
Identities = 59/198 (29%), Positives = 74/198 (37%), Gaps = 35/198 (17%)
Query: 18 PYGLQSGLLPV-----LLRAGGLSLTRVGLAKVLYAPWLLKLAWAP---LVDAQGSARAW 69
P+G S LP+ +L L L G VL AP LL W L A G
Sbjct: 6 PHGQLSPALPLASSVLMLLMSTLWLVGAGPGLVL-APELLLDPWQVHRLLTHALGH---- 60
Query: 70 VTRSTAGLGLVCGLLAGLPPPGAGQ------------AGLPAAVAGLLLLLNLGAAMQDV 117
TA GL+ LL LP G Q + L A +GLL +L G +
Sbjct: 61 ----TALPGLLLSLLL-LPTVGWQQECHLGTLRFLHASALLALASGLLAVLLAGLGLSSA 115
Query: 118 ALDALAVQLLEPAELGPGNTVQVVAYKLGAALAGGALLALLPTFSWPQLFL-----LLAA 172
A + + G G+ + L L+ LLAL P S FL LLA
Sbjct: 116 AGSCGYMPVHLAMLAGEGHRPRRPRGALPPWLSPWLLLALTPLLSSEPPFLQLLCGLLAG 175
Query: 173 TYWLAAALAWAAPALRRL 190
+ A A W P+ RRL
Sbjct: 176 LAYAAGAFRWLEPSERRL 193
>gi|226529806 histone deacetylase 10 isoform 2 [Homo sapiens]
Length = 649
Score = 29.6 bits (65), Expect = 5.2
Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 15/80 (18%)
Query: 96 GLPAAVAGLLLLLNLGAAMQDVALDALAVQLLEPAELGPGNTVQVVAYKLGAA----LAG 151
G + + GL+L L G D+ L AL GPG+ +Q L AA LAG
Sbjct: 534 GFLSCILGLVLPLAYGF-QPDLVLVAL----------GPGHGLQGPHAALLAAMLRGLAG 582
Query: 152 GALLALLPTFSWPQLFLLLA 171
G +LALL S PQL +LA
Sbjct: 583 GRVLALLEENSTPQLAGILA 602
>gi|20070354 histone deacetylase 10 isoform 1 [Homo sapiens]
Length = 669
Score = 29.6 bits (65), Expect = 5.2
Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 15/80 (18%)
Query: 96 GLPAAVAGLLLLLNLGAAMQDVALDALAVQLLEPAELGPGNTVQVVAYKLGAA----LAG 151
G + + GL+L L G D+ L AL GPG+ +Q L AA LAG
Sbjct: 554 GFLSCILGLVLPLAYGF-QPDLVLVAL----------GPGHGLQGPHAALLAAMLRGLAG 602
Query: 152 GALLALLPTFSWPQLFLLLA 171
G +LALL S PQL +LA
Sbjct: 603 GRVLALLEENSTPQLAGILA 622
>gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens]
Length = 1630
Score = 29.3 bits (64), Expect = 6.8
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 85 AGLPP--PGAGQAGLPAAVAGLLLLLNLGAAMQDVALDALAVQLLEPA 130
AG+P P AG+A AA A +LL+L+L A+ + AL + QL + A
Sbjct: 97 AGIPEAAPAAGEASSAAAAAAVLLMLDL-CAVSNAALARVLRQLSDVA 143
>gi|23503293 solute carrier family 16, member 11 [Homo sapiens]
Length = 471
Score = 28.9 bits (63), Expect = 8.9
Identities = 60/204 (29%), Positives = 77/204 (37%), Gaps = 19/204 (9%)
Query: 9 AGLYLVQGLPYGLQSGLLPVLLRAGGLSLTRVGL---AKVLYAPWLLKLAWAPLVDAQGS 65
A + + GL YGL LR+ GL+ + W+ LA A A
Sbjct: 43 AAAFAINGLSYGL--------LRSLGLAFPDLAEHFDRSAQDTAWISALALAVQQAASPV 94
Query: 66 ARAWVTRSTAG-LGLVCGLLAGLPPP-GAGQAGLPAAVAGLLLLLNLGAAMQDV-ALDAL 122
A TR A + +V G+LA L A + L GL LL G A+ AL L
Sbjct: 95 GSALSTRWGARPVVMVGGVLASLGFVFSAFASDLLHLYLGLGLLAGFGWALVFAPALGTL 154
Query: 123 AVQLLEPAELGPGNTVQVVAYKLGAALAGGALLALLPTFSWPQLFLLLAA-TYWLAAALA 181
+ L G + + + L AL LL TF W LLL A T L A
Sbjct: 155 SRYFSRRRVLAVG--LALTGNGASSLLLAPALQLLLDTFGWRGALLLLGAITLHLTPCGA 212
Query: 182 WAAPALRRLPQQPPSEQRPHTAHL 205
P + LP PP+ R A L
Sbjct: 213 LLLPLV--LPGDPPAPPRSPLAAL 234
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.141 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,321,759
Number of Sequences: 37866
Number of extensions: 743585
Number of successful extensions: 2873
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 2854
Number of HSP's gapped (non-prelim): 43
length of query: 412
length of database: 18,247,518
effective HSP length: 105
effective length of query: 307
effective length of database: 14,271,588
effective search space: 4381377516
effective search space used: 4381377516
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.