Guide to the Human Genome
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Name: MTMR9 Sequence: fasta or formatted (549aa) NCBI GI: 19923424
Description:

myotubularin related protein 9

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         33           2
 C cysteine            2.4         13           1
 D aspartate           3.5         19           2
 E glutamate           8.9         49           2
 F phenylalanine       4.9         27           2
 G glycine             4.7         26           3
 H histidine           2.7         15           2
 I isoleucine          7.3         40           3
 K lysine              4.7         26           2
 L leucine            10.7         59           2
 M methionine          2.0         11           1
 N asparagine          4.6         25           2
 P proline             4.4         24           2
 Q glutamine           5.1         28           2
 R arginine            6.0         33           2
 S serine              7.1         39           2
 T threonine           5.3         29           2
 V valine              4.2         23           2
 W tryptophan          2.6         14           1
 Y tyrosine            2.9         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myotubularin related protein 9 
MTMR7                 0.288   myotubularin related protein 7 
MTMR2                 0.280   myotubularin-related protein 2 isoform 1 
MTMR2                 0.280   myotubularin-related protein 2 isoform 2 
MTMR2                 0.280   myotubularin-related protein 2 isoform 2 
MTMR6                 0.272   myotubularin related protein 6 
MTMR1                 0.272   myotubularin-related protein 1 
MTMR8                 0.268   myotubularin related protein 8 
MTM1                  0.247   myotubularin 
MTMR4                 0.205   myotubularin related protein 4 
MTMR3                 0.195   myotubularin-related protein 3 isoform b 
MTMR3                 0.195   myotubularin-related protein 3 isoform a 
MTMR3                 0.195   myotubularin-related protein 3 isoform c 
MTMR10                0.122   myotubularin related protein 10 
MTMR11                0.114   myotubularin related protein 11 isoform a 
MTMR11                0.114   myotubularin related protein 11 isoform b 
MTMR12                0.093   myotubularin related protein 12 
SBF2                  0.087   SET binding factor 2 
SBF1                  0.085   SET binding factor 1 
CACNA2D3              0.005   calcium channel, voltage-dependent, alpha 2/delta 3 ...
SLC35F4               0.005   solute carrier family 35, member F4 
MYH14                 0.005   myosin, heavy chain 14 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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