Guide to the Human Genome
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Name: ZNF238 Sequence: fasta or formatted (522aa) NCBI GI: 19923354
Description:

zinc finger protein 238 isoform 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [531aa] zinc finger protein 238 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         34           3
 C cysteine            3.6         19           1
 D aspartate           7.5         39           2
 E glutamate           8.0         42           2
 F phenylalanine       3.1         16           1
 G glycine             4.0         21           2
 H histidine           4.2         22           1
 I isoleucine          2.5         13           1
 K lysine              6.1         32           3
 L leucine             9.6         50           3
 M methionine          2.3         12           2
 N asparagine          2.7         14           2
 P proline             4.4         23           1
 Q glutamine           3.6         19           1
 R arginine            5.0         26           2
 S serine             12.1         63           2
 T threonine           4.6         24           2
 V valine              6.9         36           2
 W tryptophan          0.8          4           1
 Y tyrosine            2.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 238 isoform 2 
ZNF238                1.000   zinc finger protein 238 isoform 1 
ZBTB3                 0.228   zinc finger and BTB domain containing 3 
ZBTB42                0.207   zinc finger and BTB domain containing 42 
ZBTB17                0.139   zinc finger and BTB domain containing 17 
MYNN                  0.133   myoneurin 
ZNF509                0.125   zinc finger protein 509 
ZBTB43                0.098   zinc finger and BTB domain containing 43 
ZBTB43                0.098   zinc finger and BTB domain containing 43 
ZBTB5                 0.089   zinc finger and BTB domain containing 5 
ZNF14                 0.074   zinc finger protein 14 
ZNF236                0.074   zinc finger protein 236 
ZNF670                0.073   zinc finger protein 670 
ZNF250                0.073   zinc finger protein 250 isoform b 
ZNF250                0.073   zinc finger protein 250 isoform a 
ZNF700                0.073   zinc finger protein 700 
ZNF264                0.072   zinc finger protein 264 
ZNF101                0.072   zinc finger protein 101 
ZNF263                0.072   zinc finger protein 263 
HIC2                  0.072   hypermethylated in cancer 2 
ZNF846                0.071   zinc finger protein 846 
ZNF136                0.071   zinc finger protein 136 
ZNF607                0.071   zinc finger protein 607 
ZNF643                0.071   zinc finger protein 643 
ZNF135                0.071   zinc finger protein 135 
ZNF572                0.071   zinc finger protein 572 
ZNF181                0.071   zinc finger protein 181 isoform 2 
ZNF181                0.071   zinc finger protein 181 isoform 1 
ZNF180                0.071   zinc finger protein 180 
ZNF486                0.071   zinc finger protein 486 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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