Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 198386341
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo
sapiens]
(244 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo sa... 492 e-139
gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo sa... 390 e-109
gi|209529703 signal-regulatory protein beta 1 isoform 3 precurso... 100 9e-22
gi|18426911 signal-regulatory protein alpha precursor [Homo sapi... 99 4e-21
gi|91105767 signal-regulatory protein alpha precursor [Homo sapi... 99 4e-21
gi|91105764 signal-regulatory protein alpha precursor [Homo sapi... 99 4e-21
gi|144953876 signal-regulatory protein beta 1 isoform 1 precurso... 98 6e-21
gi|94538339 signal-regulatory protein gamma isoform 3 precursor ... 96 3e-20
gi|94538335 signal-regulatory protein gamma isoform 1 precursor ... 96 3e-20
gi|94538337 signal-regulatory protein gamma isoform 2 precursor ... 94 1e-19
gi|144953878 signal-regulatory protein beta 1 isoform 2 precurso... 92 4e-19
gi|239751927 PREDICTED: similar to signal-regulatory protein bet... 90 2e-18
gi|169217521 PREDICTED: similar to signal-regulatory protein bet... 89 5e-18
gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens] 80 2e-15
gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo ... 80 2e-15
gi|30425382 signal-regulatory protein delta [Homo sapiens] 79 5e-15
gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo ... 53 2e-07
gi|19743898 receptor tyrosine kinase-like orphan receptor 2 prec... 45 6e-05
gi|254028242 fibroblast growth factor receptor 3 isoform 3 precu... 40 0.001
gi|13112048 fibroblast growth factor receptor 3 isoform 2 precur... 40 0.001
gi|4503711 fibroblast growth factor receptor 3 isoform 1 precurs... 40 0.001
gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo sa... 38 0.007
gi|38490688 immunoglobulin superfamily, member 10 [Homo sapiens] 37 0.012
gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens] 37 0.016
gi|167857792 programmed cell death 1 precursor [Homo sapiens] 36 0.035
gi|167614500 lymphocyte-activation protein 3 precursor [Homo sap... 36 0.035
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 35 0.046
gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens] 35 0.046
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 35 0.046
gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo ... 35 0.046
>gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo
sapiens]
Length = 244
Score = 492 bits (1266), Expect = e-139
Identities = 244/244 (100%), Positives = 244/244 (100%)
Query: 1 MCSTMSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGAGDPEPD 60
MCSTMSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGAGDPEPD
Sbjct: 1 MCSTMSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGAGDPEPD 60
Query: 61 LWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAV 120
LWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAV
Sbjct: 61 LWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAV 120
Query: 121 QASNNDFSILLQNVSSEDAGTYYCVKFQRKPNRQYLSGQGTSLKVKAKSTSSKEAEFTSE 180
QASNNDFSILLQNVSSEDAGTYYCVKFQRKPNRQYLSGQGTSLKVKAKSTSSKEAEFTSE
Sbjct: 121 QASNNDFSILLQNVSSEDAGTYYCVKFQRKPNRQYLSGQGTSLKVKAKSTSSKEAEFTSE 180
Query: 181 PATEMSPTGLLVVFAPVVLGLKAITLAALLLALATSRRSPGQEDVKTTGPAGAMNTLAWS 240
PATEMSPTGLLVVFAPVVLGLKAITLAALLLALATSRRSPGQEDVKTTGPAGAMNTLAWS
Sbjct: 181 PATEMSPTGLLVVFAPVVLGLKAITLAALLLALATSRRSPGQEDVKTTGPAGAMNTLAWS 240
Query: 241 KGQE 244
KGQE
Sbjct: 241 KGQE 244
>gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo
sapiens]
Length = 342
Score = 390 bits (1003), Expect = e-109
Identities = 194/200 (97%), Positives = 197/200 (98%)
Query: 45 EGPMLVAEGAGDPEPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSRE 104
EG ++ +GAGDPEPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSRE
Sbjct: 143 EGTSVLVKGAGDPEPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSRE 202
Query: 105 AIYNFGGISHPKETAVQASNNDFSILLQNVSSEDAGTYYCVKFQRKPNRQYLSGQGTSLK 164
AIYNFGGISHPKETAVQASNNDFSILLQNVSSEDAGTYYCVKFQRKPNRQYLSGQGTSLK
Sbjct: 203 AIYNFGGISHPKETAVQASNNDFSILLQNVSSEDAGTYYCVKFQRKPNRQYLSGQGTSLK 262
Query: 165 VKAKSTSSKEAEFTSEPATEMSPTGLLVVFAPVVLGLKAITLAALLLALATSRRSPGQED 224
VKAKSTSSKEAEFTSEPATEMSPTGLLVVFAPVVLGLKAITLAALLLALATSRRSPGQED
Sbjct: 263 VKAKSTSSKEAEFTSEPATEMSPTGLLVVFAPVVLGLKAITLAALLLALATSRRSPGQED 322
Query: 225 VKTTGPAGAMNTLAWSKGQE 244
VKTTGPAGAMNTLAWSKGQE
Sbjct: 323 VKTTGPAGAMNTLAWSKGQE 342
Score = 154 bits (390), Expect = 5e-38
Identities = 92/206 (44%), Positives = 113/206 (54%), Gaps = 28/206 (13%)
Query: 1 MCSTMSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGAGDPEPD 60
MCSTMSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAE
Sbjct: 1 MCSTMSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAE-------- 52
Query: 61 LWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPK---- 116
G+T+ L C V+G G I+W + + ++ IYNF S P
Sbjct: 53 --------------GETLLLRCMVVGSCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPM 98
Query: 117 -ETAVQASNNDFSILLQNVSSEDAGTYYCVKFQ-RKPNRQYLSGQGTSLKVKAKSTSSKE 174
+ + N D+SI + NV+ E GTY+CV+F + + S +GTS+ VK +
Sbjct: 99 IQRTSEPLNCDYSIYIHNVTREHTGTYHCVRFDGLSEHSEMKSDEGTSVLVKGAGDPEPD 158
Query: 175 AEFTSEPATEMSPTGLLVVFAPVVLG 200
+ TG V VLG
Sbjct: 159 LWIIQPQELVLGTTGDTVFLNCTVLG 184
>gi|209529703 signal-regulatory protein beta 1 isoform 3 precursor
[Homo sapiens]
Length = 398
Score = 100 bits (250), Expect = 9e-22
Identities = 69/189 (36%), Positives = 96/189 (50%), Gaps = 34/189 (17%)
Query: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGAGDPEPDLWII 64
M P HLP FLL+ L+L +G + + QV+QP+ + VA
Sbjct: 1 MPVPASWPHLPSPFLLMTLLL--GRLTGVAGEEELQVIQPDKSISVA------------- 45
Query: 65 QPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAV---- 120
G++ L+CTV P GPI+WF+GAG RE IYN P+ T V
Sbjct: 46 ---------AGESATLHCTVTSLIPVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLT 96
Query: 121 QASNNDFSILLQNVSSEDAGTYYCVKFQR-KPNR-QYLSGQGTSLKVKAKSTSSKEAEFT 178
+ +N DFSI + N++ DAGTYYCVKF++ P+ ++ SG GT L V+AK + A
Sbjct: 97 KRNNMDFSIRISNITPADAGTYYCVKFRKGSPDHVEFKSGAGTELSVRAKPS----APVV 152
Query: 179 SEPATEMSP 187
S PA +P
Sbjct: 153 SGPAARATP 161
>gi|18426911 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 98.6 bits (244), Expect = 4e-21
Identities = 58/136 (42%), Positives = 78/136 (57%), Gaps = 10/136 (7%)
Query: 58 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 117
E +L +IQP + VL G+T L CT P GPI+WF+GAG RE IYN P+
Sbjct: 31 EEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGRELIYNQKEGHFPRV 90
Query: 118 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTS 171
T V + +N DFSI + N++ DAGTYYCVKF++ + ++ SG GT L V+AK +
Sbjct: 91 TTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPS- 149
Query: 172 SKEAEFTSEPATEMSP 187
A S PA +P
Sbjct: 150 ---APVVSGPAARATP 162
>gi|91105767 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 98.6 bits (244), Expect = 4e-21
Identities = 58/136 (42%), Positives = 78/136 (57%), Gaps = 10/136 (7%)
Query: 58 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 117
E +L +IQP + VL G+T L CT P GPI+WF+GAG RE IYN P+
Sbjct: 31 EEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGRELIYNQKEGHFPRV 90
Query: 118 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTS 171
T V + +N DFSI + N++ DAGTYYCVKF++ + ++ SG GT L V+AK +
Sbjct: 91 TTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPS- 149
Query: 172 SKEAEFTSEPATEMSP 187
A S PA +P
Sbjct: 150 ---APVVSGPAARATP 162
>gi|91105764 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 98.6 bits (244), Expect = 4e-21
Identities = 58/136 (42%), Positives = 78/136 (57%), Gaps = 10/136 (7%)
Query: 58 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 117
E +L +IQP + VL G+T L CT P GPI+WF+GAG RE IYN P+
Sbjct: 31 EEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGRELIYNQKEGHFPRV 90
Query: 118 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTS 171
T V + +N DFSI + N++ DAGTYYCVKF++ + ++ SG GT L V+AK +
Sbjct: 91 TTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPS- 149
Query: 172 SKEAEFTSEPATEMSP 187
A S PA +P
Sbjct: 150 ---APVVSGPAARATP 162
>gi|144953876 signal-regulatory protein beta 1 isoform 1 precursor
[Homo sapiens]
Length = 398
Score = 98.2 bits (243), Expect = 6e-21
Identities = 67/189 (35%), Positives = 93/189 (49%), Gaps = 34/189 (17%)
Query: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGAGDPEPDLWII 64
M P HLP FLL+ L+L +G + ++ QV+QPE + VA
Sbjct: 1 MPVPASWPHLPSPFLLMTLLL--GRLTGVAGEDELQVIQPEKSVSVA------------- 45
Query: 65 QPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAV---- 120
G++ L C + P GPI WF+GAG RE IYN P+ T V
Sbjct: 46 ---------AGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELT 96
Query: 121 QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTSSKEAEFT 178
+ +N DFSI + N++ DAGTYYCVKF++ + ++ SG GT L V+AK + A
Sbjct: 97 KRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPS----APVV 152
Query: 179 SEPATEMSP 187
S PA +P
Sbjct: 153 SGPAVRATP 161
>gi|94538339 signal-regulatory protein gamma isoform 3 precursor
[Homo sapiens]
Length = 276
Score = 95.9 bits (237), Expect = 3e-20
Identities = 61/173 (35%), Positives = 88/173 (50%), Gaps = 31/173 (17%)
Query: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGAGDPEPDLWII 64
M P H P FLLL L+L ++ +G E +L +I
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLGLTEVAG-------------------------EEELQMI 35
Query: 65 QPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAV---- 120
QP++L+L T G T L+CTV P GP+ WF+G G RE IYN P+ T V
Sbjct: 36 QPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLT 95
Query: 121 QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTS 171
+ +N DFSI + +++ D GTYYCVKF++ N ++ SG GT + + AK ++
Sbjct: 96 KRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEMALGAKPSA 148
>gi|94538335 signal-regulatory protein gamma isoform 1 precursor
[Homo sapiens]
Length = 387
Score = 95.9 bits (237), Expect = 3e-20
Identities = 61/173 (35%), Positives = 88/173 (50%), Gaps = 31/173 (17%)
Query: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGAGDPEPDLWII 64
M P H P FLLL L+L ++ +G E +L +I
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLGLTEVAG-------------------------EEELQMI 35
Query: 65 QPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAV---- 120
QP++L+L T G T L+CTV P GP+ WF+G G RE IYN P+ T V
Sbjct: 36 QPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLT 95
Query: 121 QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTS 171
+ +N DFSI + +++ D GTYYCVKF++ N ++ SG GT + + AK ++
Sbjct: 96 KRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEMALGAKPSA 148
>gi|94538337 signal-regulatory protein gamma isoform 2 precursor
[Homo sapiens]
Length = 170
Score = 94.0 bits (232), Expect = 1e-19
Identities = 60/173 (34%), Positives = 87/173 (50%), Gaps = 31/173 (17%)
Query: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGAGDPEPDLWII 64
M P H P FLLL L+L ++ +G E +L +I
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLGLTEVAG-------------------------EEELQMI 35
Query: 65 QPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAV---- 120
QP++L+L T G T L+CTV P GP+ WF+G G RE IYN P+ T V
Sbjct: 36 QPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLT 95
Query: 121 QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTS 171
+ +N DFSI + +++ D GTYYCVKF++ N ++ SG GT + + ++S
Sbjct: 96 KRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEMALGGPASS 148
>gi|144953878 signal-regulatory protein beta 1 isoform 2 precursor
[Homo sapiens]
Length = 181
Score = 92.0 bits (227), Expect = 4e-19
Identities = 60/168 (35%), Positives = 84/168 (50%), Gaps = 30/168 (17%)
Query: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGAGDPEPDLWII 64
M P HLP FLL+ L+L +G + ++ QV+QPE + VA
Sbjct: 1 MPVPASWPHLPSPFLLMTLLL--GRLTGVAGEDELQVIQPEKSVSVA------------- 45
Query: 65 QPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAV---- 120
G++ L C + P GPI WF+GAG RE IYN P+ T V
Sbjct: 46 ---------AGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELT 96
Query: 121 QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVK 166
+ +N DFSI + N++ DAGTYYCVKF++ + ++ SG GT L V+
Sbjct: 97 KRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 144
>gi|239751927 PREDICTED: similar to signal-regulatory protein beta 1
[Homo sapiens]
Length = 136
Score = 89.7 bits (221), Expect = 2e-18
Identities = 49/116 (42%), Positives = 69/116 (59%), Gaps = 6/116 (5%)
Query: 58 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 117
E +L +IQP++ V G++ L C + P GPI WF+GAG RE IYN P+
Sbjct: 13 EDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRV 72
Query: 118 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKA 167
T V + +N DFSI + N++ DAGTYYCVKF++ + ++ SG GT L V+A
Sbjct: 73 TTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRA 128
>gi|169217521 PREDICTED: similar to signal-regulatory protein beta 1
[Homo sapiens]
Length = 160
Score = 88.6 bits (218), Expect = 5e-18
Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 6/117 (5%)
Query: 58 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 117
E +L +IQP++ V G++ L C + P GPI WF+GAG RE IYN P+
Sbjct: 13 EDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRV 72
Query: 118 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAK 168
T V + +N DFSI + N++ DAGTYYCVKF++ + ++ SG GT L V+ +
Sbjct: 73 TTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRGE 129
>gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens]
Length = 651
Score = 80.1 bits (196), Expect = 2e-15
Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 6/120 (5%)
Query: 60 DLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETA 119
+L +IQP+ V G+ LNCTV P GPI+WF+GA ++ IY+ P+ T
Sbjct: 514 ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHSPRVTT 573
Query: 120 V----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTSSK 173
+ + ++ D+SI + +++ EDAGTYYC+K +R N + SG GT + V+ SK
Sbjct: 574 ISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVRGLLLGSK 633
Score = 52.8 bits (125), Expect = 3e-07
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 92 PIRWFQGAGLSREAIYNFGGISHPKETAV----QASNNDFSILLQNVSSEDAGTYYCVKF 147
P +WF+G +E IY+ G PK + + +N DFS+ + +++ + GTY CVKF
Sbjct: 429 PEKWFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKF 488
Query: 148 QR-KPNRQYLSGQGTSLKV 165
+ P+ + SG GT L V
Sbjct: 489 WKGGPDMELKSGPGTELSV 507
>gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo
sapiens]
Length = 651
Score = 80.1 bits (196), Expect = 2e-15
Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 6/120 (5%)
Query: 60 DLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETA 119
+L +IQP+ V G+ LNCTV P GPI+WF+GA ++ IY+ P+ T
Sbjct: 514 ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHSPRVTT 573
Query: 120 V----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTSSK 173
+ + ++ D+SI + +++ EDAGTYYC+K +R N + SG GT + V+ SK
Sbjct: 574 ISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVRGLLLGSK 633
Score = 52.8 bits (125), Expect = 3e-07
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 92 PIRWFQGAGLSREAIYNFGGISHPKETAV----QASNNDFSILLQNVSSEDAGTYYCVKF 147
P +WF+G +E IY+ G PK + + +N DFS+ + +++ + GTY CVKF
Sbjct: 429 PEKWFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKF 488
Query: 148 QR-KPNRQYLSGQGTSLKV 165
+ P+ + SG GT L V
Sbjct: 489 WKGGPDMELKSGPGTELSV 507
>gi|30425382 signal-regulatory protein delta [Homo sapiens]
Length = 197
Score = 78.6 bits (192), Expect = 5e-15
Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 73 TTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNF--GGISHPKE--TAVQASNNDFS 128
+TG+++ L+C+V P GP+ WF+G G +R+ IYNF G KE + N DFS
Sbjct: 42 STGESIILSCSVPDTLPNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFS 101
Query: 129 ILLQNVSSEDAGTYYCVKF-QRKPNRQYLSGQGTSLKV 165
++ +S DAGTYYCVKF + + ++Y SG+GT + V
Sbjct: 102 TRIREISLADAGTYYCVKFIKGRAIKEYQSGRGTQVFV 139
>gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo
sapiens]
Length = 532
Score = 53.1 bits (126), Expect = 2e-07
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 92 PIRWFQGAGLSREAIYNFGGISHPKETAV----QASNNDFSILLQNVSSEDAGTYYCVKF 147
P +WF+G +E IY+ G PK + + +N DFS+ + +++ + GTY CVKF
Sbjct: 429 PEKWFKGTETGQELIYSSKGGHFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKF 488
Query: 148 QR-KPNRQYLSGQGTSLKVKAK 168
+ P+ + SG GT L V ++
Sbjct: 489 WKGGPDMELKSGPGTELSVHSE 510
>gi|19743898 receptor tyrosine kinase-like orphan receptor 2
precursor [Homo sapiens]
Length = 943
Score = 45.1 bits (105), Expect = 6e-05
Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 20/137 (14%)
Query: 14 LPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGAGDPEPDLW-----IIQPQE 68
+P + AL+L S SG+ +VL P P+ +G P P L ++P
Sbjct: 15 IPAVWAAAALLLSVSRTSGEV-----EVLDPNDPLGPLDGQDGPIPTLKGYFLNFLEPVN 69
Query: 69 LVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDFS 128
+ G T L+C V G+ PP +RW + + + P+ ++ +
Sbjct: 70 NITIVQGQTAILHCKVAGNPPPN-VRWLKN---------DAPVVQEPRRIIIRKTEYGSR 119
Query: 129 ILLQNVSSEDAGTYYCV 145
+ +Q++ + D G Y CV
Sbjct: 120 LRIQDLDTTDTGYYQCV 136
>gi|254028242 fibroblast growth factor receptor 3 isoform 3
precursor [Homo sapiens]
Length = 808
Score = 40.4 bits (93), Expect = 0.001
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 28/132 (21%)
Query: 15 PPCFLLLAL-VLVPSDASGQSSRNDWQVLQPEGPMLVAEGAGDPEPDLWIIQPQELVLGT 73
P C L L + V + + AS +S + +V+ AE G PEP Q ++LV G+
Sbjct: 4 PACALALCVAVAIVAGASSESLGTEQRVVGR-----AAEVPG-PEPG----QQEQLVFGS 53
Query: 74 TGDTVFLNCTVLGDGPPGPIRWFQ-GAGLSREAIYNFGGISHPKETAVQASNNDFSILLQ 132
GD V L+C G GP GP W + G GL P E + + +
Sbjct: 54 -GDAVELSCPPPGGGPMGPTVWVKDGTGLV------------PSERVLVGPQR---LQVL 97
Query: 133 NVSSEDAGTYYC 144
N S ED+G Y C
Sbjct: 98 NASHEDSGAYSC 109
>gi|13112048 fibroblast growth factor receptor 3 isoform 2 precursor
[Homo sapiens]
Length = 694
Score = 40.4 bits (93), Expect = 0.001
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 28/132 (21%)
Query: 15 PPCFLLLAL-VLVPSDASGQSSRNDWQVLQPEGPMLVAEGAGDPEPDLWIIQPQELVLGT 73
P C L L + V + + AS +S + +V+ AE G PEP Q ++LV G+
Sbjct: 4 PACALALCVAVAIVAGASSESLGTEQRVVGR-----AAEVPG-PEPG----QQEQLVFGS 53
Query: 74 TGDTVFLNCTVLGDGPPGPIRWFQ-GAGLSREAIYNFGGISHPKETAVQASNNDFSILLQ 132
GD V L+C G GP GP W + G GL P E + + +
Sbjct: 54 -GDAVELSCPPPGGGPMGPTVWVKDGTGLV------------PSERVLVGPQR---LQVL 97
Query: 133 NVSSEDAGTYYC 144
N S ED+G Y C
Sbjct: 98 NASHEDSGAYSC 109
>gi|4503711 fibroblast growth factor receptor 3 isoform 1 precursor
[Homo sapiens]
Length = 806
Score = 40.4 bits (93), Expect = 0.001
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 28/132 (21%)
Query: 15 PPCFLLLAL-VLVPSDASGQSSRNDWQVLQPEGPMLVAEGAGDPEPDLWIIQPQELVLGT 73
P C L L + V + + AS +S + +V+ AE G PEP Q ++LV G+
Sbjct: 4 PACALALCVAVAIVAGASSESLGTEQRVVGR-----AAEVPG-PEPG----QQEQLVFGS 53
Query: 74 TGDTVFLNCTVLGDGPPGPIRWFQ-GAGLSREAIYNFGGISHPKETAVQASNNDFSILLQ 132
GD V L+C G GP GP W + G GL P E + + +
Sbjct: 54 -GDAVELSCPPPGGGPMGPTVWVKDGTGLV------------PSERVLVGPQR---LQVL 97
Query: 133 NVSSEDAGTYYC 144
N S ED+G Y C
Sbjct: 98 NASHEDSGAYSC 109
Score = 28.9 bits (63), Expect = 4.3
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 75 GDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGG--ISHPKETAVQASNNDFSIL-L 131
G V +C V D P I+W + ++ + G ++ K ++ + +L L
Sbjct: 268 GSDVEFHCKVYSDAQPH-IQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSL 326
Query: 132 QNVSSEDAGTYYCV 145
NV+ EDAG Y C+
Sbjct: 327 HNVTFEDAGEYTCL 340
>gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo
sapiens]
Length = 2113
Score = 38.1 bits (87), Expect = 0.007
Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 20/133 (15%)
Query: 59 PDLWIIQP--QELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPK 116
P +++QP Q+ + G G LNC+V G PP + W G Y+ P
Sbjct: 749 PPRFVVQPNNQDGIYGKAG---VLNCSVDGYPPP-KVMWKHAKGSGNPQQYH----PVPL 800
Query: 117 ETAVQASNNDFSILLQNVSSEDAGTYYCVKFQRKPNRQYLSGQGTSLKVKAKSTSSKEAE 176
+Q N S+L+++V ED G Y C Q +G GT + T A
Sbjct: 801 TGRIQILPNS-SLLIRHVLEEDIGYYLC---------QASNGVGTDISKSMFLTVKIPAM 850
Query: 177 FTSEPATEMSPTG 189
TS P T ++ G
Sbjct: 851 ITSHPNTTIAIKG 863
>gi|38490688 immunoglobulin superfamily, member 10 [Homo sapiens]
Length = 2623
Score = 37.4 bits (85), Expect = 0.012
Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 14/136 (10%)
Query: 59 PDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKET 118
P + + Q +++++GT G+++ L CT G P + W G + +
Sbjct: 1841 PPVILEQRRQVIVGTWGESLKLPCTAKGTPQPS-VYWVLSDGTEVKP------LQFTNSK 1893
Query: 119 AVQASNNDFSILLQNVSSEDAGTYYCVK-----FQRKPNRQYLSGQGTSLKVKAKSTSSK 173
SN ++ ++N++S D GTY C+ +R+ + + TS +++A S
Sbjct: 1894 LFLFSNG--TLYIRNLASSDRGTYECIATSSTGSERRVVMLTMEERVTSPRIEAASQKRT 1951
Query: 174 EAEFTSEPATEMSPTG 189
E F + S TG
Sbjct: 1952 EVNFGDKLLLNCSATG 1967
Score = 29.3 bits (64), Expect = 3.3
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
Query: 68 ELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQASNNDF 127
E ++ G + LNC+V G+ PP I W L ++ G S+ + ASN F
Sbjct: 2345 EKIVAQLGKSTALNCSVDGN-PPPEIIWI----LPNGTRFSNGPQSY---QYLIASNGSF 2396
Query: 128 SILLQNVSSEDAGTYYC 144
++ + EDAG Y C
Sbjct: 2397 --IISKTTREDAGKYRC 2411
>gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]
Length = 1349
Score = 37.0 bits (84), Expect = 0.016
Identities = 49/169 (28%), Positives = 68/169 (40%), Gaps = 18/169 (10%)
Query: 49 LVAEGAGDPEPDLWIIQPQELVLGTTGDTVFLNCTVL----GDGPPGPIRWFQGAGLSRE 104
L AEGA + + E V G++V L C V+ G PP + WF+ G+
Sbjct: 18 LAAEGAHG------LREEPEFVTARAGESVVLRCDVIHPVTGQPPPYVVEWFK-FGVPIP 70
Query: 105 AIYNFGGISH--PKETAVQASNND-FSILLQNVSSEDAGTYYC-VKFQRKPNRQYLSGQG 160
FG E A +AS +D S+ L+ V SED G Y C V + + +G
Sbjct: 71 IFIKFGYYPPHVDPEYAGRASLHDKASLRLEQVRSEDQGWYECKVLMLDQQYDTFHNGSW 130
Query: 161 TSLKVKAKSTSSKEAEFTSEPATEMSPTGLLVVFA---PVVLGLKAITL 206
L + A T ++ E S T F P+V LK TL
Sbjct: 131 VHLTINAPPTFTETPPQYIEAKEGGSITMTCTAFGNPKPIVTWLKEGTL 179
>gi|167857792 programmed cell death 1 precursor [Homo sapiens]
Length = 288
Score = 35.8 bits (81), Expect = 0.035
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 6/109 (5%)
Query: 123 SNNDFSILLQNVSSEDAGTYYCVKFQRKPNRQYLSGQGTSLKVKAKSTSSKEAEFTSEPA 182
+ DF + + D+GTY C P Q SL+ + + T + T+ P+
Sbjct: 102 NGRDFHMSVVRARRNDSGTYLCGAISLAPKAQIKE----SLRAELRVTERRAEVPTAHPS 157
Query: 183 TEMSPTGLLVVFAPVVLG--LKAITLAALLLALATSRRSPGQEDVKTTG 229
P G V+G L ++ L +LA+ SR + G + TG
Sbjct: 158 PSPRPAGQFQTLVVGVVGGLLGSLVLLVWVLAVICSRAARGTIGARRTG 206
>gi|167614500 lymphocyte-activation protein 3 precursor [Homo
sapiens]
Length = 525
Score = 35.8 bits (81), Expect = 0.035
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 22/86 (25%)
Query: 77 TVFLNCTVLGDGPPGPIRWFQGAG------------------LSREAIYNFGGISHPKET 118
++ N TVLG PP P+ + GAG L+ + GG +
Sbjct: 252 SIMYNLTVLGLEPPTPLTVYAGAGSRVGLPCRLPAGVGTRSFLTAKWTPPGGG----PDL 307
Query: 119 AVQASNNDFSILLQNVSSEDAGTYYC 144
V N DF++ L++VS AGTY C
Sbjct: 308 LVTGDNGDFTLRLEDVSQAQAGTYTC 333
>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3874
Score = 35.4 bits (80), Expect = 0.046
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 15/82 (18%)
Query: 64 IQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQAS 123
++PQ++ + +GD V L C G+ P I W Q AG A +
Sbjct: 3122 VEPQDMTV-RSGDDVALRCQATGEPTP-TIEWLQ-AGQPLRASRRLRTLP---------- 3168
Query: 124 NNDFSILLQNVSSEDAGTYYCV 145
D S+ L+NV + DAGTY CV
Sbjct: 3169 --DGSLWLENVETGDAGTYDCV 3188
>gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 35.4 bits (80), Expect = 0.046
Identities = 21/96 (21%), Positives = 38/96 (39%), Gaps = 5/96 (5%)
Query: 60 DLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISH----P 115
D+ + Q + + GD V + C G + W+Q + + S P
Sbjct: 23 DIQVTQSPSSLSASVGDRVTITCRA-SQGISNGLSWYQQKPGQAPTLLIYAASSLQSGVP 81
Query: 116 KETAVQASNNDFSILLQNVSSEDAGTYYCVKFQRKP 151
+ S DF++ + ++ ED TYYC++ P
Sbjct: 82 SRFSGSGSGTDFTLTISSLQPEDVATYYCLQDYTTP 117
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 35.4 bits (80), Expect = 0.046
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 15/82 (18%)
Query: 64 IQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAVQAS 123
++PQ++ + +GD V L C G+ P I W Q AG A +
Sbjct: 4313 VEPQDMTV-RSGDDVALRCQATGEPTP-TIEWLQ-AGQPLRASRRLRTLP---------- 4359
Query: 124 NNDFSILLQNVSSEDAGTYYCV 145
D S+ L+NV + DAGTY CV
Sbjct: 4360 --DGSLWLENVETGDAGTYDCV 4379
Score = 31.2 bits (69), Expect = 0.86
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 16/90 (17%)
Query: 56 DPEPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHP 115
DP P L P V + G+T L+C VLG+ P + W + + P
Sbjct: 515 DPPPQL---VPAPNVTVSPGETAVLSCRVLGEAPYN-LTWVRDWRVL------------P 558
Query: 116 KETAVQASNNDFSILLQNVSSEDAGTYYCV 145
T A D S+ + + D G Y CV
Sbjct: 559 ASTGRVAQLADLSLEISGIIPTDGGRYQCV 588
>gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo
sapiens]
Length = 155
Score = 35.4 bits (80), Expect = 0.046
Identities = 21/96 (21%), Positives = 38/96 (39%), Gaps = 5/96 (5%)
Query: 60 DLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISH----P 115
D+ + Q + + GD V + C G + W+Q + + S P
Sbjct: 23 DIQVTQSPSSLSASVGDRVTITCRA-SQGISNGLSWYQQKPGQAPTLLIYAASSLQSGVP 81
Query: 116 KETAVQASNNDFSILLQNVSSEDAGTYYCVKFQRKP 151
+ S DF++ + ++ ED TYYC++ P
Sbjct: 82 SRFSGSGSGTDFTLTISSLQPEDVATYYCLQDYTTP 117
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,801,302
Number of Sequences: 37866
Number of extensions: 532854
Number of successful extensions: 1693
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 120
Number of HSP's that attempted gapping in prelim test: 1375
Number of HSP's gapped (non-prelim): 414
length of query: 244
length of database: 18,247,518
effective HSP length: 99
effective length of query: 145
effective length of database: 14,498,784
effective search space: 2102323680
effective search space used: 2102323680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.