Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 19743940

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|19743940 P antigen family, member 5 isoform 1 [Homo sapiens]
         (130 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|19743940 P antigen family, member 5 isoform 1 [Homo sapiens]       266   3e-72
gi|61743936 P antigen family, member 5 isoform 2 [Homo sapiens]       222   6e-59
gi|62632767 P antigen family, member 2B [Homo sapiens]                194   1e-50
gi|46409314 P antigen family, member 2 [Homo sapiens]                 180   2e-46
gi|62988344 P antigen family, member 3 (prostate associated) [Ho...    85   1e-17
gi|5901986 G antigen, family C, 1 [Homo sapiens]                       70   6e-13
gi|239755865 PREDICTED: similar to XAGE-3 protein [Homo sapiens]       70   6e-13
gi|239750353 PREDICTED: hypothetical protein XP_002347379 [Homo ...    70   6e-13
gi|239744657 PREDICTED: hypothetical protein XP_002343217 [Homo ...    70   6e-13
gi|19747273 X antigen family, member 5 [Homo sapiens]                  59   8e-10
gi|118601000 X antigen family, member 2-like [Homo sapiens]            58   2e-09
gi|19747283 XAGE-2 protein [Homo sapiens]                              58   2e-09
gi|19747271 XAGE-3 protein [Homo sapiens]                              51   3e-07
gi|19747269 XAGE-3 protein [Homo sapiens]                              51   3e-07
gi|150010546 G antigen 10 [Homo sapiens]                               51   3e-07
gi|58761528 P antigen family, member 1 [Homo sapiens]                  49   1e-06
gi|98985822 G antigen 1 isoform 2 [Homo sapiens]                       45   2e-05
gi|148529018 G antigen 2B [Homo sapiens]                               44   4e-05
gi|187761326 G antigen 2A [Homo sapiens]                               44   4e-05
gi|4503879 G antigen 2 [Homo sapiens]                                  44   4e-05
gi|148491076 G antigen 2D [Homo sapiens]                               43   6e-05
gi|7705379 G antigen 8 [Homo sapiens]                                  43   6e-05
gi|148491064 G antigen 12G [Homo sapiens]                              43   8e-05
gi|11024641 G antigen 7 [Homo sapiens]                                 43   8e-05
gi|148491078 G antigen 12F [Homo sapiens]                              43   8e-05
gi|4503889 G antigen 12I [Homo sapiens]                                43   8e-05
gi|4503887 G antigen 6 [Homo sapiens]                                  42   1e-04
gi|4503885 G antigen 5 [Homo sapiens]                                  42   1e-04
gi|4503883 G antigen 4 [Homo sapiens]                                  42   1e-04
gi|148491101 G antigen 12C [Homo sapiens]                              42   2e-04

>gi|19743940 P antigen family, member 5 isoform 1 [Homo sapiens]
          Length = 130

 Score =  266 bits (681), Expect = 3e-72
 Identities = 130/130 (100%), Positives = 130/130 (100%)

Query: 1   MQAPWAGNRGWAGTREEVRDMSEHVTRSQSSERGNDQESSQPVGPVIVQQPTEEKRQEEE 60
           MQAPWAGNRGWAGTREEVRDMSEHVTRSQSSERGNDQESSQPVGPVIVQQPTEEKRQEEE
Sbjct: 1   MQAPWAGNRGWAGTREEVRDMSEHVTRSQSSERGNDQESSQPVGPVIVQQPTEEKRQEEE 60

Query: 61  PPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQELALLKIEDAPGDGPDVREGTLPTFDPT 120
           PPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQELALLKIEDAPGDGPDVREGTLPTFDPT
Sbjct: 61  PPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQELALLKIEDAPGDGPDVREGTLPTFDPT 120

Query: 121 KVLEAGEGQL 130
           KVLEAGEGQL
Sbjct: 121 KVLEAGEGQL 130


>gi|61743936 P antigen family, member 5 isoform 2 [Homo sapiens]
          Length = 110

 Score =  222 bits (566), Expect = 6e-59
 Identities = 110/110 (100%), Positives = 110/110 (100%)

Query: 21  MSEHVTRSQSSERGNDQESSQPVGPVIVQQPTEEKRQEEEPPTDNQGIAPSGEIKNEGAP 80
           MSEHVTRSQSSERGNDQESSQPVGPVIVQQPTEEKRQEEEPPTDNQGIAPSGEIKNEGAP
Sbjct: 1   MSEHVTRSQSSERGNDQESSQPVGPVIVQQPTEEKRQEEEPPTDNQGIAPSGEIKNEGAP 60

Query: 81  AVQGTDVEAFQQELALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQL 130
           AVQGTDVEAFQQELALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQL
Sbjct: 61  AVQGTDVEAFQQELALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQL 110


>gi|62632767 P antigen family, member 2B [Homo sapiens]
          Length = 111

 Score =  194 bits (494), Expect = 1e-50
 Identities = 98/110 (89%), Positives = 103/110 (93%), Gaps = 1/110 (0%)

Query: 21  MSEHV-TRSQSSERGNDQESSQPVGPVIVQQPTEEKRQEEEPPTDNQGIAPSGEIKNEGA 79
           MSEHV TRSQSSERGNDQESSQPVG VIVQ+PTEEKRQEEEPPTDNQGIAPSGEI+NEGA
Sbjct: 1   MSEHVRTRSQSSERGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIENEGA 60

Query: 80  PAVQGTDVEAFQQELALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
           PAVQG D+EAFQQELALLKIED PGDGPDVREG +PTFD TKVLEAG+ Q
Sbjct: 61  PAVQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPTFDLTKVLEAGDAQ 110


>gi|46409314 P antigen family, member 2 [Homo sapiens]
          Length = 111

 Score =  180 bits (457), Expect = 2e-46
 Identities = 88/103 (85%), Positives = 94/103 (91%)

Query: 27  RSQSSERGNDQESSQPVGPVIVQQPTEEKRQEEEPPTDNQGIAPSGEIKNEGAPAVQGTD 86
           RSQSSERGNDQESSQPVG VIVQ+PTEEKRQEEEPPTDNQGIAPSGEI+N+  PA QG D
Sbjct: 8   RSQSSERGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIENQAVPAFQGPD 67

Query: 87  VEAFQQELALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
           +EAFQQELALLKIED PGDGPDVREG +PTFD TKVLEAG+ Q
Sbjct: 68  MEAFQQELALLKIEDEPGDGPDVREGIMPTFDLTKVLEAGDAQ 110


>gi|62988344 P antigen family, member 3 (prostate associated) [Homo
           sapiens]
          Length = 113

 Score = 85.1 bits (209), Expect = 1e-17
 Identities = 49/111 (44%), Positives = 70/111 (63%), Gaps = 3/111 (2%)

Query: 21  MSEHV-TRSQSSERGNDQESSQPVGPVIVQQ-PTEEKRQEEEPPTDNQGIAPSGEIKNEG 78
           MS H  TRS+S ER +DQ+S+ PVG V+ Q+ P+ ++ Q+EEPP ++Q   P G+ ++EG
Sbjct: 1   MSGHQRTRSRSRERRDDQDSNHPVGAVVAQELPSNDQLQQEEPPIESQDYTP-GQERDEG 59

Query: 79  APAVQGTDVEAFQQELALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
           A   Q   + A+  EL   K     GDGP+V+   LP  +P K+ EAGEGQ
Sbjct: 60  ALDFQVLGLAAYLWELTRSKTGGERGDGPNVKGEFLPNLEPVKIPEAGEGQ 110


>gi|5901986 G antigen, family C, 1 [Homo sapiens]
          Length = 102

 Score = 69.7 bits (169), Expect = 6e-13
 Identities = 44/103 (42%), Positives = 55/103 (53%), Gaps = 7/103 (6%)

Query: 27  RSQSSERGNDQESSQPVGPVIVQQPTEEKRQEEEPPTDNQGIAPSGEIKNEGAPAVQGTD 86
           RS+S  RG+ QE+     P +V      + Q+EEPPTDNQ I P  E   EG P ++   
Sbjct: 6   RSRSRGRGDGQEA-----PDVVAFVAPGESQQEEPPTDNQDIEPGQE--REGTPPIEERK 58

Query: 87  VEAFQQELALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
           VE   QE+ L K     GDG DV+E T P     K  EAG+GQ
Sbjct: 59  VEGDCQEMDLEKTRSERGDGSDVKEKTPPNPKHAKTKEAGDGQ 101


>gi|239755865 PREDICTED: similar to XAGE-3 protein [Homo sapiens]
          Length = 106

 Score = 69.7 bits (169), Expect = 6e-13
 Identities = 38/91 (41%), Positives = 59/91 (64%), Gaps = 1/91 (1%)

Query: 20  DMSEHVTRSQSSERGNDQESSQPVGPVIVQQPTEEKRQEEEPPTDNQGIAPSGEIKNEGA 79
           D+ E     ++  R N QE+S+PVGPV+VQQP++E+ Q+EEP T+++ + P G+ ++E A
Sbjct: 11  DLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVMP-GQERDEAA 69

Query: 80  PAVQGTDVEAFQQELALLKIEDAPGDGPDVR 110
           P  QG  +EA  QE++  K     GD P V+
Sbjct: 70  PKSQGPGLEADIQEVSQAKTGGKWGDDPYVK 100


>gi|239750353 PREDICTED: hypothetical protein XP_002347379 [Homo
           sapiens]
          Length = 106

 Score = 69.7 bits (169), Expect = 6e-13
 Identities = 38/91 (41%), Positives = 59/91 (64%), Gaps = 1/91 (1%)

Query: 20  DMSEHVTRSQSSERGNDQESSQPVGPVIVQQPTEEKRQEEEPPTDNQGIAPSGEIKNEGA 79
           D+ E     ++  R N QE+S+PVGPV+VQQP++E+ Q+EEP T+++ + P G+ ++E A
Sbjct: 11  DLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVMP-GQERDEAA 69

Query: 80  PAVQGTDVEAFQQELALLKIEDAPGDGPDVR 110
           P  QG  +EA  QE++  K     GD P V+
Sbjct: 70  PKSQGPGLEADIQEVSQAKTGGKWGDDPYVK 100


>gi|239744657 PREDICTED: hypothetical protein XP_002343217 [Homo
           sapiens]
          Length = 106

 Score = 69.7 bits (169), Expect = 6e-13
 Identities = 38/91 (41%), Positives = 59/91 (64%), Gaps = 1/91 (1%)

Query: 20  DMSEHVTRSQSSERGNDQESSQPVGPVIVQQPTEEKRQEEEPPTDNQGIAPSGEIKNEGA 79
           D+ E     ++  R N QE+S+PVGPV+VQQP++E+ Q+EEP T+++ + P G+ ++E A
Sbjct: 11  DLCEINFEREARGRQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVMP-GQERDEAA 69

Query: 80  PAVQGTDVEAFQQELALLKIEDAPGDGPDVR 110
           P  QG  +EA  QE++  K     GD P V+
Sbjct: 70  PKSQGPGLEADIQEVSQAKTGGKWGDDPYVK 100


>gi|19747273 X antigen family, member 5 [Homo sapiens]
          Length = 108

 Score = 59.3 bits (142), Expect = 8e-10
 Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 3/91 (3%)

Query: 40  SQPVGPVIVQQPTEEKRQEEEPPTDNQGIAPSGEIKNE-GAPAVQGTDVEAFQQELALLK 98
           +Q VGP++  +P+  + Q+EEPPT++Q   P  + +++ GA  +Q  ++EA  QEL+  K
Sbjct: 17  AQLVGPML--EPSVPEPQQEEPPTESQDHTPGQKREDDQGAAEIQVPNLEADLQELSQSK 74

Query: 99  IEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
             D  GD PDV+   LP  +  K+ E GEG+
Sbjct: 75  TGDECGDSPDVQGKILPKSEQFKMPEGGEGK 105


>gi|118601000 X antigen family, member 2-like [Homo sapiens]
          Length = 111

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 6/107 (5%)

Query: 27  RSQSSERGNDQESSQP---VGPVIVQQPTEEKRQEEEPPTDNQGIAPSGEIKNE-GAPAV 82
           R +S+ R   + S QP   +G ++  +PT+E+ +EE+PPT ++   P  + +++ GA  +
Sbjct: 4   RGRSTYRPRPRRSLQPPELIGAML--EPTDEEPKEEKPPTKSRNPTPDQKREDDQGAAEI 61

Query: 83  QGTDVEAFQQELALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
           Q  D+EA  QEL   K  D    G DV+   LP  +  K+ EAGEG+
Sbjct: 62  QVPDLEADLQELCQTKTGDGCEGGTDVKGKILPKAEHFKMPEAGEGK 108


>gi|19747283 XAGE-2 protein [Homo sapiens]
          Length = 111

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 6/107 (5%)

Query: 27  RSQSSERGNDQESSQP---VGPVIVQQPTEEKRQEEEPPTDNQGIAPSGEIKNE-GAPAV 82
           R +S+ R   + S QP   +G ++  +PT+E+ +EE+PPT ++   P  + +++ GA  +
Sbjct: 4   RGRSTYRPRPRRSLQPPELIGAML--EPTDEEPKEEKPPTKSRNPTPDQKREDDQGAAEI 61

Query: 83  QGTDVEAFQQELALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
           Q  D+EA  QEL   K  D    G DV+   LP  +  K+ EAGEG+
Sbjct: 62  QVPDLEADLQELCQTKTGDGCEGGTDVKGKILPKAEHFKMPEAGEGK 108


>gi|19747271 XAGE-3 protein [Homo sapiens]
          Length = 111

 Score = 50.8 bits (120), Expect = 3e-07
 Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 6/109 (5%)

Query: 25  VTRSQSSERGNDQESSQP---VGPVIVQQPTEEKRQEEEPPTDNQGIAPSGE-IKNEGAP 80
           + R +S+ R   + S  P   +GP++ +   EE +QE EPPT+++  AP  E  +++GA 
Sbjct: 2   IWRGRSTYRPRPRRSVPPPELIGPML-EPGDEEPQQE-EPPTESRDPAPGQEREEDQGAA 59

Query: 81  AVQGTDVEAFQQELALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
             Q  D+EA  QEL+  K     G+GPD +   LP  +  K+ E G+ Q
Sbjct: 60  ETQVPDLEADLQELSQSKTGGECGNGPDDQGKILPKSEQFKMPEGGDRQ 108


>gi|19747269 XAGE-3 protein [Homo sapiens]
          Length = 111

 Score = 50.8 bits (120), Expect = 3e-07
 Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 6/109 (5%)

Query: 25  VTRSQSSERGNDQESSQP---VGPVIVQQPTEEKRQEEEPPTDNQGIAPSGE-IKNEGAP 80
           + R +S+ R   + S  P   +GP++ +   EE +QE EPPT+++  AP  E  +++GA 
Sbjct: 2   IWRGRSTYRPRPRRSVPPPELIGPML-EPGDEEPQQE-EPPTESRDPAPGQEREEDQGAA 59

Query: 81  AVQGTDVEAFQQELALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
             Q  D+EA  QEL+  K     G+GPD +   LP  +  K+ E G+ Q
Sbjct: 60  ETQVPDLEADLQELSQSKTGGECGNGPDDQGKILPKSEQFKMPEGGDRQ 108


>gi|150010546 G antigen 10 [Homo sapiens]
          Length = 116

 Score = 50.8 bits (120), Expect = 3e-07
 Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 4/96 (4%)

Query: 38  ESSQPVGPVIVQQPTEEKR----QEEEPPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQE 93
           E  + +GP++ +Q ++E      +E EP T  Q  A + E ++EGA A QG   EA  QE
Sbjct: 18  EPPEMIGPMLPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQE 77

Query: 94  LALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
               K     GDGPD +E  LP  +  K  E GE Q
Sbjct: 78  QVHPKTGCECGDGPDGQEMGLPNPEEVKRPEEGEKQ 113


>gi|58761528 P antigen family, member 1 [Homo sapiens]
          Length = 146

 Score = 48.9 bits (115), Expect = 1e-06
 Identities = 28/78 (35%), Positives = 41/78 (52%)

Query: 49  QQPTEEKRQEEEPPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQELALLKIEDAPGDGPD 108
           ++ ++E+  E E PT +Q   P+ E ++EGA A QG + EA  QEL   K     GDGPD
Sbjct: 21  EESSDEQPDEVESPTQSQDSTPAEEREDEGASAAQGQEPEADSQELVQPKTGCELGDGPD 80

Query: 109 VREGTLPTFDPTKVLEAG 126
            +   L   +  K+   G
Sbjct: 81  TKRVCLRNEEQMKLPAEG 98


>gi|98985822 G antigen 1 isoform 2 [Homo sapiens]
          Length = 117

 Score = 45.1 bits (105), Expect = 2e-05
 Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 43  VGPVIVQQPTEEKR----QEEEPPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQELALLK 98
           +GP+  +Q ++E      +E EP T  Q  A + E ++EGA A QG   EA  QE    +
Sbjct: 24  IGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQ 83

Query: 99  IEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
                 DGPD +E   P  +  K  E GEGQ
Sbjct: 84  TGCECEDGPDGQEMDPPNPEEVKTPEEGEGQ 114


>gi|148529018 G antigen 2B [Homo sapiens]
          Length = 116

 Score = 43.9 bits (102), Expect = 4e-05
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 4/96 (4%)

Query: 38  ESSQPVGPVIVQQPTEEKR----QEEEPPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQE 93
           E  + +GP+  +Q ++E      +E EP T  Q  A + E ++EGA A QG   EA  QE
Sbjct: 18  EPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQE 77

Query: 94  LALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
               +      DGPD +E   P  +  K  E GE Q
Sbjct: 78  QGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQ 113


>gi|187761326 G antigen 2A [Homo sapiens]
          Length = 116

 Score = 43.9 bits (102), Expect = 4e-05
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 4/96 (4%)

Query: 38  ESSQPVGPVIVQQPTEEKR----QEEEPPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQE 93
           E  + +GP+  +Q ++E      +E EP T  Q  A + E ++EGA A QG   EA  QE
Sbjct: 18  EPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGQDEGASAGQGPKPEAHSQE 77

Query: 94  LALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
               +      DGPD +E   P  +  K  E GE Q
Sbjct: 78  QGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQ 113


>gi|4503879 G antigen 2 [Homo sapiens]
          Length = 116

 Score = 43.9 bits (102), Expect = 4e-05
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 4/96 (4%)

Query: 38  ESSQPVGPVIVQQPTEEKR----QEEEPPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQE 93
           E  + +GP+  +Q ++E      +E EP T  Q  A + E ++EGA A QG   EA  QE
Sbjct: 18  EPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQE 77

Query: 94  LALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
               +      DGPD +E   P  +  K  E GE Q
Sbjct: 78  QGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQ 113


>gi|148491076 G antigen 2D [Homo sapiens]
          Length = 116

 Score = 43.1 bits (100), Expect = 6e-05
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 4/96 (4%)

Query: 38  ESSQPVGPVIVQQPTEEKR----QEEEPPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQE 93
           E  + +GP+  +Q ++E      +E EP T  Q  A + E ++EGA A QG   EA  QE
Sbjct: 18  EPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQE 77

Query: 94  LALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
               +      DGPD +E   P  +  K  E GE Q
Sbjct: 78  QGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQ 113


>gi|7705379 G antigen 8 [Homo sapiens]
          Length = 116

 Score = 43.1 bits (100), Expect = 6e-05
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 4/96 (4%)

Query: 38  ESSQPVGPVIVQQPTEEKR----QEEEPPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQE 93
           E  + +GP+  +Q ++E      +E EP T  Q  A + E ++EGA A QG   EA  QE
Sbjct: 18  EPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQE 77

Query: 94  LALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
               +      DGPD +E   P  +  K  E GE Q
Sbjct: 78  QGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQ 113


>gi|148491064 G antigen 12G [Homo sapiens]
          Length = 117

 Score = 42.7 bits (99), Expect = 8e-05
 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 43  VGPVIVQQPTEEKR----QEEEPPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQELALLK 98
           +GP+  +Q ++E      +E EP T  Q  A + E ++EGA A QG   EA  QE    +
Sbjct: 24  IGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQEQGHPQ 83

Query: 99  IEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
                 DGPD +E   P  +  K  E GE Q
Sbjct: 84  TGCECEDGPDGQEMDPPNPEEVKTPEEGEKQ 114


>gi|11024641 G antigen 7 [Homo sapiens]
          Length = 117

 Score = 42.7 bits (99), Expect = 8e-05
 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 43  VGPVIVQQPTEEKR----QEEEPPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQELALLK 98
           +GP+  +Q ++E      +E EP T  Q  A + E ++EGA A QG   EA  QE    +
Sbjct: 24  IGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQEQGHPQ 83

Query: 99  IEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
                 DGPD +E   P  +  K  E GE Q
Sbjct: 84  TGCECEDGPDGQEMDPPNPEEVKTPEEGEKQ 114


>gi|148491078 G antigen 12F [Homo sapiens]
          Length = 117

 Score = 42.7 bits (99), Expect = 8e-05
 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 43  VGPVIVQQPTEEKR----QEEEPPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQELALLK 98
           +GP+  +Q ++E      +E EP T  Q  A + E ++EGA A QG   EA  QE    +
Sbjct: 24  IGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQEQGHPQ 83

Query: 99  IEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
                 DGPD +E   P  +  K  E GE Q
Sbjct: 84  TGCECEDGPDGQEMDPPNPEEVKTPEEGEKQ 114


>gi|4503889 G antigen 12I [Homo sapiens]
          Length = 117

 Score = 42.7 bits (99), Expect = 8e-05
 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 43  VGPVIVQQPTEEKR----QEEEPPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQELALLK 98
           +GP+  +Q ++E      +E EP T  Q  A + E ++EGA A QG   EA  QE    +
Sbjct: 24  IGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQEQGHPQ 83

Query: 99  IEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
                 DGPD +E   P  +  K  E GE Q
Sbjct: 84  TGCECEDGPDGQEMDPPNPEEVKTPEEGEKQ 114


>gi|4503887 G antigen 6 [Homo sapiens]
          Length = 117

 Score = 42.0 bits (97), Expect = 1e-04
 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 43  VGPVIVQQPTEEKR----QEEEPPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQELALLK 98
           +GP+  +Q ++E      +E EP T  Q  A + E ++EGA A QG   EA  QE    +
Sbjct: 24  IGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQ 83

Query: 99  IEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
                 DGPD +E   P  +  K  E GE Q
Sbjct: 84  TGCECEDGPDGQEVDPPNPEEVKTPEEGEKQ 114


>gi|4503885 G antigen 5 [Homo sapiens]
          Length = 117

 Score = 42.0 bits (97), Expect = 1e-04
 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 43  VGPVIVQQPTEEKR----QEEEPPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQELALLK 98
           +GP+  +Q ++E      +E EP T  Q  A + E ++EGA A QG   EA  QE    +
Sbjct: 24  IGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQ 83

Query: 99  IEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
                 DGPD +E   P  +  K  E GE Q
Sbjct: 84  TGCECEDGPDGQEMDPPNPEEVKTPEEGEKQ 114


>gi|4503883 G antigen 4 [Homo sapiens]
          Length = 117

 Score = 42.0 bits (97), Expect = 1e-04
 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 43  VGPVIVQQPTEEKR----QEEEPPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQELALLK 98
           +GP+  +Q ++E      +E EP T  Q  A + E ++EGA A QG   EA  QE    +
Sbjct: 24  IGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQ 83

Query: 99  IEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
                 DGPD +E   P  +  K  E GE Q
Sbjct: 84  TGCECEDGPDGQEMDPPNPEEVKTPEEGEKQ 114


>gi|148491101 G antigen 12C [Homo sapiens]
          Length = 117

 Score = 41.6 bits (96), Expect = 2e-04
 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 43  VGPVIVQQPTEEKR----QEEEPPTDNQGIAPSGEIKNEGAPAVQGTDVEAFQQELALLK 98
           +GP+  +Q ++E      +E EP T  Q  A + E ++EGA A QG   EA  QE    +
Sbjct: 24  IGPMRPEQFSDEVEPATPEEGEPATQCQDPAAAQEGEDEGASAGQGPKPEAHSQEQGHPQ 83

Query: 99  IEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129
                 DGPD +E   P  +  K  E GE Q
Sbjct: 84  TGCECEDGPDGQEMDPPNPEEVKTPEEGEKQ 114


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.305    0.128    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,250,106
Number of Sequences: 37866
Number of extensions: 331841
Number of successful extensions: 1321
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 105
Number of HSP's that attempted gapping in prelim test: 1147
Number of HSP's gapped (non-prelim): 261
length of query: 130
length of database: 18,247,518
effective HSP length: 90
effective length of query: 40
effective length of database: 14,839,578
effective search space: 593583120
effective search space used: 593583120
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 56 (26.2 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press