AFAP1 11457

Name: AFAP1	Sequence: fasta or formatted (814aa)		NCBI GI: 197382472
Description: actin filament associated protein 1 isoform a		Referenced in: Cytoskeleton
Other entries for this name: alt prot [730aa] actin filament associated protein 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 57 2 C cysteine 2.0 16 1 D aspartate 4.7 38 2 E glutamate 8.6 70 4 F phenylalanine 1.4 11 1 G glycine 6.3 51 2 H histidine 1.8 15 1 I isoleucine 3.8 31 2 K lysine 10.0 81 4 L leucine 9.5 77 2 M methionine 1.0 8 1 N asparagine 3.3 27 1 P proline 7.1 58 4 Q glutamine 3.9 32 2 R arginine 4.9 40 2 S serine 10.2 83 3 T threonine 5.2 42 2 V valine 5.5 45 2 W tryptophan 1.1 9 1 Y tyrosine 2.8 23 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 actin filament associated protein 1 isoform a [Homo... AFAP1 0.712 actin filament associated protein 1 AFAP1L1 0.279 actin filament associated protein 1-like 1 isoform ... AFAP1L1 0.279 actin filament associated protein 1-like 1 isoform 1... AFAP1L2 0.263 KIAA1914 protein isoform 1 AFAP1L2 0.263 KIAA1914 protein isoform 2 FARP1 0.016 FERM, RhoGEF, and pleckstrin domain protein 1 isoform... ARHGAP12 0.014 Rho GTPase activating protein 12 FGD4 0.013 FYVE, RhoGEF and PH domain containing 4 LOC100133758 0.013 PREDICTED: hypothetical protein, partial FARP2 0.012 FERM, RhoGEF and pleckstrin domain protein 2 PLEKHA6 0.012 phosphoinositol 3-phosphate-binding protein-3 CALD1 0.012 caldesmon 1 isoform 5 CALD1 0.012 caldesmon 1 isoform 4 CALD1 0.012 caldesmon 1 isoform 3 CALD1 0.012 caldesmon 1 isoform 2 CALD1 0.012 caldesmon 1 isoform 1 MYH9 0.012 myosin, heavy polypeptide 9, non-muscle INCENP 0.012 inner centromere protein antigens 135/155kDa isofor... INCENP 0.012 inner centromere protein antigens 135/155kDa isofor... PLEC1 0.012 plectin 1 isoform 11 PLEC1 0.012 plectin 1 isoform 10 PLEC1 0.012 plectin 1 isoform 8 PLEC1 0.012 plectin 1 isoform 7 PLEC1 0.012 plectin 1 isoform 6 PLEC1 0.012 plectin 1 isoform 3 PLEC1 0.012 plectin 1 isoform 2 PLEC1 0.012 plectin 1 isoform 1 MYH11 0.011 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.011 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.