SPATC1 11390

Name: SPATC1	Sequence: fasta or formatted (591aa)		NCBI GI: 197276668
Description: spermatogenesis and centriole associated 1 isoform 1		Referenced in: Testes and Sperm
Other entries for this name: alt prot [441aa] spermatogenesis and centriole associated 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.0 53 2 C cysteine 0.7 4 1 D aspartate 1.7 10 2 E glutamate 5.4 32 2 F phenylalanine 2.0 12 1 G glycine 6.3 37 2 H histidine 2.2 13 1 I isoleucine 2.9 17 2 K lysine 2.5 15 2 L leucine 12.0 71 4 M methionine 2.5 15 2 N asparagine 3.4 20 2 P proline 11.5 68 2 Q glutamine 4.6 27 1 R arginine 4.9 29 2 S serine 11.8 70 3 T threonine 8.8 52 2 V valine 6.3 37 3 W tryptophan 0.3 2 1 Y tyrosine 1.2 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 spermatogenesis and centriole associated 1 isoform ... SPATC1 0.729 spermatogenesis and centriole associated 1 isoform ... LOC100292343 0.174 PREDICTED: similar to spermatogenesis and centriole... C21orf56 0.115 hypothetical protein LOC84221 isoform 1 C21orf56 0.115 hypothetical protein LOC84221 isoform 2 MUC2 0.056 mucin 2 precursor FLJ22184 0.055 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.048 PREDICTED: hypothetical protein FLJ22184 LOC100294420 0.046 PREDICTED: similar to mucin 2 SRCAP 0.045 Snf2-related CBP activator protein MUC5AC 0.043 mucin 5AC FLJ22184 0.041 PREDICTED: hypothetical protein LOC80164 MUC5B 0.041 mucin 5, subtype B, tracheobronchial NACA 0.041 nascent polypeptide-associated complex alpha subuni... MUC17 0.040 mucin 17 BAT2D1 0.039 HBxAg transactivated protein 2 LOC100133756 0.037 PREDICTED: hypothetical protein, partial LOC100128719 0.035 PREDICTED: hypothetical protein, partial LOC100128719 0.035 PREDICTED: hypothetical protein, partial POLR2A 0.035 DNA-directed RNA polymerase II A MUC6 0.035 mucin 6, gastric MUC12 0.034 PREDICTED: mucin 12 GLTSCR1 0.034 glioma tumor suppressor candidate region gene 1 [Ho... MUC7 0.033 mucin 7, secreted precursor LOC100292286 0.033 PREDICTED: similar to spermatogenesis and centriole... LOC100288424 0.033 PREDICTED: hypothetical protein XP_002342922 MUC7 0.033 mucin 7, secreted precursor MUC7 0.033 mucin 7, secreted precursor LOC284297 0.033 hypothetical protein LOC284297 LOC100134147 0.033 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.