Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: INPP4A Sequence: fasta or formatted (977aa) NCBI GI: 197116359
Description:

inositol polyphosphate-4-phosphatase, type 1 isoform d

Referenced in:

Inositol Pathways

Other entries for this name:
alt prot [972aa] inositol polyphosphate-4-phosphatase, type 1 isoform c
alt prot [954aa] inositol polyphosphate-4-phosphatase, type 1 isoform b
alt prot [938aa] inositol polyphosphate-4-phosphatase, type 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         65           2
 C cysteine            3.0         29           2
 D aspartate           5.3         52           2
 E glutamate           6.8         66           3
 F phenylalanine       3.5         34           2
 G glycine             5.0         49           2
 H histidine           2.7         26           2
 I isoleucine          4.6         45           2
 K lysine              4.8         47           2
 L leucine            11.0        107           3
 M methionine          2.7         26           2
 N asparagine          3.4         33           2
 P proline             4.9         48           3
 Q glutamine           5.3         52           2
 R arginine            6.7         65           2
 S serine              7.9         77           2
 T threonine           6.7         65           2
 V valine              6.0         59           2
 W tryptophan          1.0         10           1
 Y tyrosine            2.3         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   inositol polyphosphate-4-phosphatase, type 1 isofor... 
INPP4A                0.990   inositol polyphosphate-4-phosphatase, type 1 isofor...
INPP4A                0.942   inositol polyphosphate-4-phosphatase, type 1 isoform ...
INPP4A                0.899   inositol polyphosphate-4-phosphatase, type 1 isoform ...
INPP4B                0.365   inositol polyphosphate-4-phosphatase, type II, 105k...
INPP4B                0.365   inositol polyphosphate-4-phosphatase, type II, 105k...
PREX2                 0.050   DEP domain containing 2 isoform a 
PREX1                 0.049   phosphatidylinositol-3,4,5-trisphosphate-dependent R...
CPNE9                 0.006   copine-like protein 
CPNE7                 0.005   copine 7 isoform a 
CPNE7                 0.005   copine 7 isoform b 
CPNE5                 0.005   copine V 
MFN1                  0.005   mitofusin 1 
ATOH8                 0.005   atonal homolog 8 
EN1                   0.005   engrailed homeobox 1 
CPNE8                 0.005   copine VIII 
LOC642622             0.004   PREDICTED: similar to hCG1798126 
LOC642622             0.004   PREDICTED: similar to hCG1798126, partial 
LOC642622             0.004   PREDICTED: similar to hCG1798126 
WWC1                  0.004   WW and C2 domain containing 1 isoform 3 
WWC1                  0.004   WW and C2 domain containing 1 isoform 2 
WWC1                  0.004   WW and C2 domain containing 1 isoform 1 
MYCBP2                0.004   MYC binding protein 2 
NPHP3                 0.004   nephrocystin 3 
NLRC5                 0.004   nucleotide-binding oligomerization domains 27 [Homo...
ARMC5                 0.004   armadillo repeat containing 5 isoform b 
MFN2                  0.004   mitofusin 2 
MFN2                  0.004   mitofusin 2 
KANK1                 0.004   KN motif and ankyrin repeat domains 1 isoform b [Hom...
KANK1                 0.004   KN motif and ankyrin repeat domains 1 isoform a [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press