Guide to the Human Genome
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Name: TTLL6 Sequence: fasta or formatted (584aa) NCBI GI: 195963416
Description:

tubulin tyrosine ligase-like family, member 6 isoform 2

Referenced in:

Tubulins and Microtubules

Other entries for this name:
alt prot [891aa] tubulin tyrosine ligase-like family, member 6 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         29           2
 C cysteine            2.2         13           2
 D aspartate           3.9         23           1
 E glutamate           7.5         44           3
 F phenylalanine       3.6         21           2
 G glycine             4.1         24           2
 H histidine           2.4         14           1
 I isoleucine          3.6         21           2
 K lysine              8.6         50           3
 L leucine            11.0         64           3
 M methionine          1.9         11           1
 N asparagine          4.3         25           2
 P proline             6.2         36           2
 Q glutamine           6.0         35           3
 R arginine            5.0         29           1
 S serine             11.3         66           3
 T threonine           6.0         35           2
 V valine              4.3         25           2
 W tryptophan          0.9          5           1
 Y tyrosine            2.4         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tubulin tyrosine ligase-like family, member 6 isofo... 
TTLL6                 0.956   tubulin tyrosine ligase-like family, member 6 isofo...
TTLL13                0.139   tubulin tyrosine ligase-like family, member 13 [Homo...
TTLL7                 0.100   tubulin tyrosine ligase-like family, member 7 
TTLL5                 0.048   tubulin tyrosine ligase-like family, member 5 
TTLL9                 0.047   tubulin tyrosine ligase-like family, member 9 
TTLL4                 0.044   tubulin tyrosine ligase-like family, member 4 [Homo...
TTLL11                0.041   tubulin tyrosine ligase-like family, member 11 a [H...
TTLL2                 0.041   tubulin tyrosine ligase-like family, member 2 
TTLL1                 0.033   tubulin tyrosine ligase-like family, member 1 
TTLL10                0.021   tubulin tyrosine ligase-like family, member 10 isof...
FILIP1                0.014   filamin A interacting protein 1 
PHF2                  0.013   PHD finger protein 2 
TTL                   0.012   tubulin tyrosine ligase 
TTLL8                 0.012   tubulin tyrosine ligase-like family, member 8 [Homo...
TTLL3                 0.011   tubulin tyrosine ligase-like family, member 3 [Homo...
BRDT                  0.010   testis-specific bromodomain protein 
BRDT                  0.010   testis-specific bromodomain protein 
TTLL11                0.010   tubulin tyrosine ligase-like family, member 11 b [Ho...
PKP4                  0.010   plakophilin 4 isoform b 
PKP4                  0.010   plakophilin 4 isoform a 
RBM33                 0.010   RNA binding motif protein 33 
CCDC34                0.010   coiled-coil domain containing 34 isoform 1 
ZNF318                0.010   zinc finger protein 318 
SYTL2                 0.010   synaptotagmin-like 2 isoform a 
SYTL2                 0.010   synaptotagmin-like 2 isoform g 
TCHH                  0.010   trichohyalin 
OSBPL3                0.010   oxysterol-binding protein-like protein 3 isoform c [...
BZRAP1                0.010   peripheral benzodiazepine receptor-associated prote...
BZRAP1                0.010   peripheral benzodiazepine receptor-associated prote...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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