Guide to the Human Genome
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Name: THAP5 Sequence: fasta or formatted (395aa) NCBI GI: 194440668
Description:

THAP domain containing 5 isoform 1

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [353aa] THAP domain containing 5 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.8         11           2
 C cysteine            1.8          7           2
 D aspartate           4.3         17           1
 E glutamate           9.6         38           2
 F phenylalanine       3.5         14           1
 G glycine             2.5         10           2
 H histidine           3.3         13           1
 I isoleucine          5.3         21           2
 K lysine              9.4         37           3
 L leucine             9.4         37           2
 M methionine          1.5          6           1
 N asparagine          7.3         29           2
 P proline             4.8         19           2
 Q glutamine           5.1         20           2
 R arginine            3.3         13           2
 S serine              9.4         37           3
 T threonine           8.4         33           2
 V valine              5.1         20           1
 W tryptophan          1.3          5           1
 Y tyrosine            2.0          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   THAP domain containing 5 isoform 1 
THAP5                 0.880   THAP domain containing 5 isoform 2 
THAP8                 0.101   THAP domain containing 8 
THAP4                 0.091   THAP domain containing 4 
THAP1                 0.061   THAP domain containing, apoptosis associated protein ...
THAP3                 0.058   THAP domain containing, apoptosis associated protein...
THAP2                 0.055   THAP domain containing, apoptosis associated protein...
THAP7                 0.045   THAP domain containing 7 isoform 2 
THAP7                 0.045   THAP domain containing 7 isoform 1 
THAP9                 0.040   THAP domain containing 9 
THAP6                 0.036   THAP domain containing 6 
PRKRIR                0.035   protein-kinase, interferon-inducible double stranded...
MUC3A                 0.028   PREDICTED: mucin 3A, cell surface associated, parti...
LOC728080             0.018   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.018   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.018   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.018   PREDICTED: similar to Golgin subfamily A member 8-l...
MUC3B                 0.017   PREDICTED: mucin 3B, cell surface associated, parti...
KCMF1                 0.017   potassium channel modulatory factor 1 
FAM135A               0.015   hypothetical protein LOC57579 isoform c 
FAM135A               0.015   hypothetical protein LOC57579 isoform b 
FAM135A               0.015   hypothetical protein LOC57579 isoform a 
LOC727909             0.015   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.015   PREDICTED: similar to Golgin subfamily A member 8-l...
LRRIQ1                0.015   leucine-rich repeats and IQ motif containing 1 isof...
LRRIQ1                0.015   leucine-rich repeats and IQ motif containing 1 isof...
LOC100134138          0.014   PREDICTED: similar to mucin, partial 
LOC100133408          0.014   PREDICTED: similar to mucin 
TPR                   0.014   nuclear pore complex-associated protein TPR 
CCDC30                0.014   coiled-coil domain containing 30 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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