BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|113415024 PREDICTED: similar to destrin [Homo sapiens] (199 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|113415024 PREDICTED: similar to destrin [Homo sapiens] 414 e-116 gi|169165465 PREDICTED: similar to Destrin (actin depolymerizing... 368 e-102 gi|169165083 PREDICTED: similar to Destrin (actin depolymerizing... 367 e-102 gi|5802966 destrin isoform a [Homo sapiens] 244 3e-65 gi|58530848 destrin isoform b [Homo sapiens] 219 9e-58 gi|5031635 cofilin 1 (non-muscle) [Homo sapiens] 165 2e-41 gi|14719392 cofilin 2 [Homo sapiens] 161 3e-40 gi|33946278 cofilin 2 [Homo sapiens] 161 3e-40 gi|239754918 PREDICTED: similar to destrin [Homo sapiens] 159 1e-39 gi|239749458 PREDICTED: similar to destrin [Homo sapiens] 159 1e-39 gi|239743590 PREDICTED: hypothetical protein XP_002342890 [Homo ... 159 1e-39 gi|6005846 twinfilin-like protein [Homo sapiens] 34 0.072 gi|40068475 twinfilin 1 [Homo sapiens] 33 0.12 gi|113205089 zinc finger, MYM domain containing 1 [Homo sapiens] 32 0.47 gi|148596992 heart alpha-kinase [Homo sapiens] 29 2.3 gi|122937227 U2-associated SR140 protein [Homo sapiens] 29 2.3 gi|4505175 KIT ligand isoform b precursor [Homo sapiens] 28 5.1 gi|40807477 retinoic acid induced 1 [Homo sapiens] 28 6.7 gi|148664201 cytoskeleton associated protein 2 isoform 2 [Homo s... 27 8.8 gi|148664244 cytoskeleton associated protein 2 isoform 1 [Homo s... 27 8.8 >gi|113415024 PREDICTED: similar to destrin [Homo sapiens] Length = 199 Score = 414 bits (1065), Expect = e-116 Identities = 199/199 (100%), Positives = 199/199 (100%) Query: 1 MRHFGHEKMREGGSGQREESGKDSVPTSGLPCVPVTVAAKTDSGVQVADEVCHIFCDIKV 60 MRHFGHEKMREGGSGQREESGKDSVPTSGLPCVPVTVAAKTDSGVQVADEVCHIFCDIKV Sbjct: 1 MRHFGHEKMREGGSGQREESGKDSVPTSGLPCVPVTVAAKTDSGVQVADEVCHIFCDIKV 60 Query: 61 HKCSTSEEIKKRKKTVIFCLSADKKCIIVEEGKEISAGDIGVSITGPFKHFVGMLPEKDC 120 HKCSTSEEIKKRKKTVIFCLSADKKCIIVEEGKEISAGDIGVSITGPFKHFVGMLPEKDC Sbjct: 61 HKCSTSEEIKKRKKTVIFCLSADKKCIIVEEGKEISAGDIGVSITGPFKHFVGMLPEKDC 120 Query: 121 CYALYDASFETKKSGRVLFVCLFLWAPELPPLKSKMIFTSCKDAIKKKFQANGPEDLNWA 180 CYALYDASFETKKSGRVLFVCLFLWAPELPPLKSKMIFTSCKDAIKKKFQANGPEDLNWA Sbjct: 121 CYALYDASFETKKSGRVLFVCLFLWAPELPPLKSKMIFTSCKDAIKKKFQANGPEDLNWA 180 Query: 181 CIAEKLDGYLIAAFEGCSV 199 CIAEKLDGYLIAAFEGCSV Sbjct: 181 CIAEKLDGYLIAAFEGCSV 199 >gi|169165465 PREDICTED: similar to Destrin (actin depolymerizing factor) [Homo sapiens] Length = 252 Score = 368 bits (945), Expect = e-102 Identities = 177/177 (100%), Positives = 177/177 (100%) Query: 23 DSVPTSGLPCVPVTVAAKTDSGVQVADEVCHIFCDIKVHKCSTSEEIKKRKKTVIFCLSA 82 DSVPTSGLPCVPVTVAAKTDSGVQVADEVCHIFCDIKVHKCSTSEEIKKRKKTVIFCLSA Sbjct: 76 DSVPTSGLPCVPVTVAAKTDSGVQVADEVCHIFCDIKVHKCSTSEEIKKRKKTVIFCLSA 135 Query: 83 DKKCIIVEEGKEISAGDIGVSITGPFKHFVGMLPEKDCCYALYDASFETKKSGRVLFVCL 142 DKKCIIVEEGKEISAGDIGVSITGPFKHFVGMLPEKDCCYALYDASFETKKSGRVLFVCL Sbjct: 136 DKKCIIVEEGKEISAGDIGVSITGPFKHFVGMLPEKDCCYALYDASFETKKSGRVLFVCL 195 Query: 143 FLWAPELPPLKSKMIFTSCKDAIKKKFQANGPEDLNWACIAEKLDGYLIAAFEGCSV 199 FLWAPELPPLKSKMIFTSCKDAIKKKFQANGPEDLNWACIAEKLDGYLIAAFEGCSV Sbjct: 196 FLWAPELPPLKSKMIFTSCKDAIKKKFQANGPEDLNWACIAEKLDGYLIAAFEGCSV 252 >gi|169165083 PREDICTED: similar to Destrin (actin depolymerizing factor) [Homo sapiens] Length = 252 Score = 367 bits (942), Expect = e-102 Identities = 176/177 (99%), Positives = 177/177 (100%) Query: 23 DSVPTSGLPCVPVTVAAKTDSGVQVADEVCHIFCDIKVHKCSTSEEIKKRKKTVIFCLSA 82 DSVPTSGLPCVPVTVAAKTDSGVQVADEVCHIFCDIKVHKCSTSEEIKKRKKTVIFCLSA Sbjct: 76 DSVPTSGLPCVPVTVAAKTDSGVQVADEVCHIFCDIKVHKCSTSEEIKKRKKTVIFCLSA 135 Query: 83 DKKCIIVEEGKEISAGDIGVSITGPFKHFVGMLPEKDCCYALYDASFETKKSGRVLFVCL 142 DKKCIIVEEGKEISAGDIGV+ITGPFKHFVGMLPEKDCCYALYDASFETKKSGRVLFVCL Sbjct: 136 DKKCIIVEEGKEISAGDIGVTITGPFKHFVGMLPEKDCCYALYDASFETKKSGRVLFVCL 195 Query: 143 FLWAPELPPLKSKMIFTSCKDAIKKKFQANGPEDLNWACIAEKLDGYLIAAFEGCSV 199 FLWAPELPPLKSKMIFTSCKDAIKKKFQANGPEDLNWACIAEKLDGYLIAAFEGCSV Sbjct: 196 FLWAPELPPLKSKMIFTSCKDAIKKKFQANGPEDLNWACIAEKLDGYLIAAFEGCSV 252 >gi|5802966 destrin isoform a [Homo sapiens] Length = 165 Score = 244 bits (624), Expect = 3e-65 Identities = 128/164 (78%), Positives = 134/164 (81%), Gaps = 8/164 (4%) Query: 43 SGVQVADEVCHIFCDIKVHKCSTSEEIKKRKKTVIFCLSADKKCIIVEEGKEISAGDIGV 102 SGVQVADEVC IF D+KV KCST EEIKKRKK VIFCLSADKKCIIVEEGKEI GD+GV Sbjct: 3 SGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDVGV 62 Query: 103 SITGPFKHFVGMLPEKDCCYALYDASFETKKSGRVLFVCLFLWAPELPPLKSKMIFTSCK 162 +IT PFKHFVGMLPEKDC YALYDASFETK+S R + FLWAPEL PLKSKMI+ S K Sbjct: 63 TITDPFKHFVGMLPEKDCRYALYDASFETKES-RKEELMFFLWAPELAPLKSKMIYASSK 121 Query: 163 DAIKKKF-------QANGPEDLNWACIAEKLDGYLIAAFEGCSV 199 DAIKKKF QANGPEDLN ACIAEKL G LI AFEGC V Sbjct: 122 DAIKKKFQGIKHECQANGPEDLNRACIAEKLGGSLIVAFEGCPV 165 >gi|58530848 destrin isoform b [Homo sapiens] Length = 148 Score = 219 bits (559), Expect = 9e-58 Identities = 115/149 (77%), Positives = 121/149 (81%), Gaps = 8/149 (5%) Query: 58 IKVHKCSTSEEIKKRKKTVIFCLSADKKCIIVEEGKEISAGDIGVSITGPFKHFVGMLPE 117 +KV KCST EEIKKRKK VIFCLSADKKCIIVEEGKEI GD+GV+IT PFKHFVGMLPE Sbjct: 1 MKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDVGVTITDPFKHFVGMLPE 60 Query: 118 KDCCYALYDASFETKKSGRVLFVCLFLWAPELPPLKSKMIFTSCKDAIKKKF-------Q 170 KDC YALYDASFETK+S R + FLWAPEL PLKSKMI+ S KDAIKKKF Q Sbjct: 61 KDCRYALYDASFETKES-RKEELMFFLWAPELAPLKSKMIYASSKDAIKKKFQGIKHECQ 119 Query: 171 ANGPEDLNWACIAEKLDGYLIAAFEGCSV 199 ANGPEDLN ACIAEKL G LI AFEGC V Sbjct: 120 ANGPEDLNRACIAEKLGGSLIVAFEGCPV 148 >gi|5031635 cofilin 1 (non-muscle) [Homo sapiens] Length = 166 Score = 165 bits (418), Expect = 2e-41 Identities = 91/162 (56%), Positives = 113/162 (69%), Gaps = 9/162 (5%) Query: 43 SGVQVADEVCHIFCDIKVHKCSTSEEIKKRKKTVIFCLSADKKCIIVEEGKEISAGDIGV 102 SGV V+D V +F D+KV K ST EE+KKRKK V+FCLS DKK II+EEGKEI GD+G Sbjct: 3 SGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQ 62 Query: 103 SITGPFKHFVGMLPEKDCCYALYDASFETKKSGRVLFVCLFLWAPELPPLKSKMIFTSCK 162 ++ P+ FV MLP+KDC YALYDA++ETK+S + V +F WAPE PLKSKMI+ S K Sbjct: 63 TVDDPYATFVKMLPDKDCRYALYDATYETKESKKEDLVFIF-WAPESAPLKSKMIYASSK 121 Query: 163 DAIKKK-------FQANGPEDLNWAC-IAEKLDGYLIAAFEG 196 DAIKKK QAN E++ C +AEKL G + + EG Sbjct: 122 DAIKKKLTGIKHELQANCYEEVKDRCTLAEKLGGSAVISLEG 163 >gi|14719392 cofilin 2 [Homo sapiens] Length = 166 Score = 161 bits (408), Expect = 3e-40 Identities = 89/162 (54%), Positives = 112/162 (69%), Gaps = 9/162 (5%) Query: 43 SGVQVADEVCHIFCDIKVHKCSTSEEIKKRKKTVIFCLSADKKCIIVEEGKEISAGDIGV 102 SGV V DEV +F D+KV K ST EEIKKRKK V+FCLS DK+ IIVEE K+I GDIG Sbjct: 3 SGVTVNDEVIKVFNDMKVRKSSTQEEIKKRKKAVLFCLSDDKRQIIVEEAKQILVGDIGD 62 Query: 103 SITGPFKHFVGMLPEKDCCYALYDASFETKKSGRVLFVCLFLWAPELPPLKSKMIFTSCK 162 ++ P+ FV +LP DC YALYDA++ETK+S + V +F WAPE PLKSKMI+ S K Sbjct: 63 TVEDPYTSFVKLLPLNDCRYALYDATYETKESKKEDLVFIF-WAPESAPLKSKMIYASSK 121 Query: 163 DAIKKKF-------QANGPEDL-NWACIAEKLDGYLIAAFEG 196 DAIKKKF Q NG +D+ + + + EKL G ++ + EG Sbjct: 122 DAIKKKFTGIKHEWQVNGLDDIKDRSTLGEKLGGNVVVSLEG 163 >gi|33946278 cofilin 2 [Homo sapiens] Length = 166 Score = 161 bits (408), Expect = 3e-40 Identities = 89/162 (54%), Positives = 112/162 (69%), Gaps = 9/162 (5%) Query: 43 SGVQVADEVCHIFCDIKVHKCSTSEEIKKRKKTVIFCLSADKKCIIVEEGKEISAGDIGV 102 SGV V DEV +F D+KV K ST EEIKKRKK V+FCLS DK+ IIVEE K+I GDIG Sbjct: 3 SGVTVNDEVIKVFNDMKVRKSSTQEEIKKRKKAVLFCLSDDKRQIIVEEAKQILVGDIGD 62 Query: 103 SITGPFKHFVGMLPEKDCCYALYDASFETKKSGRVLFVCLFLWAPELPPLKSKMIFTSCK 162 ++ P+ FV +LP DC YALYDA++ETK+S + V +F WAPE PLKSKMI+ S K Sbjct: 63 TVEDPYTSFVKLLPLNDCRYALYDATYETKESKKEDLVFIF-WAPESAPLKSKMIYASSK 121 Query: 163 DAIKKKF-------QANGPEDL-NWACIAEKLDGYLIAAFEG 196 DAIKKKF Q NG +D+ + + + EKL G ++ + EG Sbjct: 122 DAIKKKFTGIKHEWQVNGLDDIKDRSTLGEKLGGNVVVSLEG 163 >gi|239754918 PREDICTED: similar to destrin [Homo sapiens] Length = 103 Score = 159 bits (402), Expect = 1e-39 Identities = 77/92 (83%), Positives = 82/92 (89%) Query: 43 SGVQVADEVCHIFCDIKVHKCSTSEEIKKRKKTVIFCLSADKKCIIVEEGKEISAGDIGV 102 SGVQVADEVC IF D+KV KCST EEIKKRKK VIFCL AD+KCIIVEEGKEI GD+GV Sbjct: 3 SGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLGADEKCIIVEEGKEILVGDVGV 62 Query: 103 SITGPFKHFVGMLPEKDCCYALYDASFETKKS 134 +ITGPFKHFVGMLPEKDC ALYDASFETK+S Sbjct: 63 TITGPFKHFVGMLPEKDCRCALYDASFETKES 94 >gi|239749458 PREDICTED: similar to destrin [Homo sapiens] Length = 103 Score = 159 bits (402), Expect = 1e-39 Identities = 77/92 (83%), Positives = 82/92 (89%) Query: 43 SGVQVADEVCHIFCDIKVHKCSTSEEIKKRKKTVIFCLSADKKCIIVEEGKEISAGDIGV 102 SGVQVADEVC IF D+KV KCST EEIKKRKK VIFCL AD+KCIIVEEGKEI GD+GV Sbjct: 3 SGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLGADEKCIIVEEGKEILVGDVGV 62 Query: 103 SITGPFKHFVGMLPEKDCCYALYDASFETKKS 134 +ITGPFKHFVGMLPEKDC ALYDASFETK+S Sbjct: 63 TITGPFKHFVGMLPEKDCRCALYDASFETKES 94 >gi|239743590 PREDICTED: hypothetical protein XP_002342890 [Homo sapiens] Length = 103 Score = 159 bits (402), Expect = 1e-39 Identities = 77/92 (83%), Positives = 82/92 (89%) Query: 43 SGVQVADEVCHIFCDIKVHKCSTSEEIKKRKKTVIFCLSADKKCIIVEEGKEISAGDIGV 102 SGVQVADEVC IF D+KV KCST EEIKKRKK VIFCL AD+KCIIVEEGKEI GD+GV Sbjct: 3 SGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLGADEKCIIVEEGKEILVGDVGV 62 Query: 103 SITGPFKHFVGMLPEKDCCYALYDASFETKKS 134 +ITGPFKHFVGMLPEKDC ALYDASFETK+S Sbjct: 63 TITGPFKHFVGMLPEKDCRCALYDASFETKES 94 >gi|6005846 twinfilin-like protein [Homo sapiens] Length = 349 Score = 34.3 bits (77), Expect = 0.072 Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 3/73 (4%) Query: 114 MLPEKDCCYALYDASFETKKSGRVLFVCLFLWAPELPPLKSKMIFTSCKDAIKKKFQANG 173 +L + CY LY + + LF+ W+P+ P++ KM++ + + +KK+F Sbjct: 60 LLDAQQPCYLLYRLDSQNAQGFEWLFLA---WSPDNSPVRLKMLYAATRATVKKEFGGGH 116 Query: 174 PEDLNWACIAEKL 186 +D + + + L Sbjct: 117 IKDELFGTVKDDL 129 >gi|40068475 twinfilin 1 [Homo sapiens] Length = 384 Score = 33.5 bits (75), Expect = 0.12 Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 5/78 (6%) Query: 114 MLPEKDCCYALYDASFETKKSGRVLFVCLFLWAPELPPLKSKMIFTSCKDAIKKKFQANG 173 +L +K CY L+ + + +F+ W+P+ ++ KM++ + + +KK+F Sbjct: 94 LLEDKQPCYILFRLDSQNAQGYEWIFIA---WSPDHSHVRQKMLYAATRATLKKEFGGGH 150 Query: 174 PEDLNWACIAE--KLDGY 189 +D + + E L GY Sbjct: 151 IKDEVFGTVKEDVSLHGY 168 >gi|113205089 zinc finger, MYM domain containing 1 [Homo sapiens] Length = 1142 Score = 31.6 bits (70), Expect = 0.47 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 12/54 (22%) Query: 45 VQVADEVCHIFCDIKVHK------------CSTSEEIKKRKKTVIFCLSADKKC 86 ++++DE+CH C KV K C+ E ++ KK V FC S C Sbjct: 431 MKISDELCHPKCTSKVQKVKGKSRSIKKSCCADFECLENSKKDVAFCYSCQLFC 484 >gi|148596992 heart alpha-kinase [Homo sapiens] Length = 2170 Score = 29.3 bits (64), Expect = 2.3 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 13/94 (13%) Query: 7 EKMREGGSGQREESGKDSV----PTSGLP-CVPVTVAAKTDSGVQVADEVCHIFCDIKVH 61 ++ +G G+ E+S KD PTS L C+P+ A GV + I H Sbjct: 1514 QESSDGSLGEAEQSKKDKAELISPTSPLSSCLPIMTHASL--GVDTHNSTGQI------H 1565 Query: 62 KCSTSEEIKKRKKTVIFCLSADKKCIIVEEGKEI 95 ++ ++ RK+ +F +S + I E GK + Sbjct: 1566 DVPENDIVEPRKRQYVFPVSQKRGTIENERGKPL 1599 >gi|122937227 U2-associated SR140 protein [Homo sapiens] Length = 1029 Score = 29.3 bits (64), Expect = 2.3 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 145 WA--PELPPLKSKMIFTSCKDAIKKKFQANGPEDLNWACIAEKLDGYLIAAFEGCSV 199 WA PE +K + IF + I++K + P+DL+ A I E+LDG + +G + Sbjct: 660 WAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPI 716 >gi|4505175 KIT ligand isoform b precursor [Homo sapiens] Length = 273 Score = 28.1 bits (61), Expect = 5.1 Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 19/142 (13%) Query: 43 SGVQVADEVCHIFCD-IKVHKCSTSEEIKKRKKTVIFCLSADKKCIIVEEGKEISAGDIG 101 S + D++ +I D ++ K ++S+++KK K S + + EE I I Sbjct: 96 SNYSIIDKLVNIVDDLVECVKENSSKDLKKSFK------SPEPRLFTPEEFFRIFNRSID 149 Query: 102 VSITGPFKHFVGMLPEKDCCYALYDASFETKKSGRVLFVCLFLWAPELPPLKSKMIFTSC 161 FK FV DC + ++ +K RV F+ LPP+ + + Sbjct: 150 A-----FKDFVVASETSDC---VVSSTLSPEKDSRVSVTKPFM----LPPVAASSLRNDS 197 Query: 162 KDAIKKKFQANGPEDLNWACIA 183 + +K G L+WA +A Sbjct: 198 SSSNRKAKNPPGDSSLHWAAMA 219 >gi|40807477 retinoic acid induced 1 [Homo sapiens] Length = 1906 Score = 27.7 bits (60), Expect = 6.7 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 3/39 (7%) Query: 5 GHEKMREGGSGQR---EESGKDSVPTSGLPCVPVTVAAK 40 G + GG G++ EE G S P G PC P T A K Sbjct: 1486 GASEDNSGGGGKKPKMEELGLASQPPEGRPCQPQTRAQK 1524 >gi|148664201 cytoskeleton associated protein 2 isoform 2 [Homo sapiens] Length = 683 Score = 27.3 bits (59), Expect = 8.8 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 9/62 (14%) Query: 43 SGVQVADEVCHIFCDIKVHKCSTSEEIKKRKKTVIFCLSADKKCIIVEEGKEISAGDIGV 102 +G Q +E+ H DI K + + + +K C EE KE+S D GV Sbjct: 490 AGAQPIEEMRHTIVDILTMKSQEKANLGE---------NMEKSCASKEEVKEVSIEDTGV 540 Query: 103 SI 104 + Sbjct: 541 DV 542 >gi|148664244 cytoskeleton associated protein 2 isoform 1 [Homo sapiens] Length = 682 Score = 27.3 bits (59), Expect = 8.8 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 9/62 (14%) Query: 43 SGVQVADEVCHIFCDIKVHKCSTSEEIKKRKKTVIFCLSADKKCIIVEEGKEISAGDIGV 102 +G Q +E+ H DI K + + + +K C EE KE+S D GV Sbjct: 489 AGAQPIEEMRHTIVDILTMKSQEKANLGE---------NMEKSCASKEEVKEVSIEDTGV 539 Query: 103 SI 104 + Sbjct: 540 DV 541 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.137 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,326,915 Number of Sequences: 37866 Number of extensions: 358381 Number of successful extensions: 779 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 759 Number of HSP's gapped (non-prelim): 20 length of query: 199 length of database: 18,247,518 effective HSP length: 97 effective length of query: 102 effective length of database: 14,574,516 effective search space: 1486600632 effective search space used: 1486600632 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.