Guide to the Human Genome
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Name: SPINT3 Sequence: fasta or formatted (89aa) NCBI GI: 189571689
Description:

serine protease inhibitor, Kunitz type, 3

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5          4           1
 C cysteine            7.9          7           1
 D aspartate           2.2          2           1
 E glutamate           9.0          8           1
 F phenylalanine      10.1          9           2
 G glycine             6.7          6           2
 H histidine           0.0          0           0
 I isoleucine          2.2          2           1
 K lysine              6.7          6           1
 L leucine            14.6         13           2
 M methionine          3.4          3           1
 N asparagine          5.6          5           2
 P proline             3.4          3           1
 Q glutamine           3.4          3           1
 R arginine            4.5          4           1
 S serine              4.5          4           1
 T threonine           6.7          6           1
 V valine              1.1          1           1
 W tryptophan          1.1          1           1
 Y tyrosine            2.2          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   serine protease inhibitor, Kunitz type, 3 
WFIKKN2               0.287   WFIKKN2 protein 
SPINT2                0.257   serine protease inhibitor, Kunitz type, 2 
TFPI                  0.257   tissue factor pathway inhibitor isoform b precursor ...
TFPI                  0.257   tissue factor pathway inhibitor isoform a precursor [...
APP                   0.251   amyloid beta A4 protein isoform b precursor 
APP                   0.251   amyloid beta A4 protein isoform a precursor 
APP                   0.251   amyloid beta A4 protein isoform f precursor 
SPINLW1               0.251   serine peptidase inhibitor-like, with Kunitz and WAP...
SPINLW1               0.251   serine peptidase inhibitor-like, with Kunitz and WAP...
APLP2                 0.234   amyloid beta (A4) precursor-like protein 2 isoform ...
APLP2                 0.234   amyloid beta (A4) precursor-like protein 2 isoform 1 ...
TFPI2                 0.222   tissue factor pathway inhibitor 2 
COL6A3                0.222   alpha 3 type VI collagen isoform 5 precursor 
COL6A3                0.222   alpha 3 type VI collagen isoform 1 precursor 
COL6A3                0.222   alpha 3 type VI collagen isoform 4 precursor 
AMBP                  0.216   alpha-1-microglobulin/bikunin preproprotein 
COL7A1                0.210   alpha 1 type VII collagen precursor 
PAPLN                 0.198   papilin 
WFIKKN1               0.192   WAP, follistatin/kazal, immunoglobulin, kunitz and n...
WFDC8                 0.174   WAP four-disulfide core domain 8 precursor 
WFDC8                 0.174   WAP four-disulfide core domain 8 precursor 
SPINT1                0.150   serine peptidase inhibitor, Kunitz type 1 isoform 2 ...
SPINT1                0.150   serine peptidase inhibitor, Kunitz type 1 isoform 2 p...
SPINT1                0.150   serine peptidase inhibitor, Kunitz type 1 isoform 1 ...
COL28A1               0.132   collagen, type XXVIII precursor 
SPINT4                0.132   serine peptidase inhibitor, Kunitz type 4 
SH3TC2                0.030   SH3 domain and tetratricopeptide repeats 2 
TBC1D2                0.006   TBC1 domain family, member 2 
ADCY5                 0.006   adenylate cyclase 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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