Guide to the Human Genome
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Name: PLA2G7 Sequence: fasta or formatted (441aa) NCBI GI: 189095271
Description:

phospholipase A2, group VII

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         29           3
 C cysteine            1.8          8           1
 D aspartate           6.6         29           2
 E glutamate           4.1         18           3
 F phenylalanine       5.4         24           2
 G glycine             6.8         30           2
 H histidine           3.4         15           1
 I isoleucine          7.3         32           2
 K lysine              6.6         29           2
 L leucine            10.0         44           2
 M methionine          2.7         12           1
 N asparagine          5.0         22           1
 P proline             4.3         19           2
 Q glutamine           4.3         19           1
 R arginine            4.1         18           1
 S serine              6.6         29           2
 T threonine           4.5         20           2
 V valine              4.3         19           2
 W tryptophan          2.0          9           1
 Y tyrosine            3.6         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase A2, group VII 
PAFAH2                0.317   platelet-activating factor acetylhydrolase 2 
MMP20                 0.009   matrix metalloproteinase 20 preproprotein 
GLUD2                 0.008   glutamate dehydrogenase 2 
GLUD1                 0.007   glutamate dehydrogenase 1 
CMBL                  0.006   carboxymethylenebutenolidase 
HOOK1                 0.006   hook homolog 1 
UTP14C                0.006   UTP14, U3 small nucleolar ribonucleoprotein, homolog...
KIF16B                0.006   kinesin-like motor protein C20orf23 
HPSE                  0.005   heparanase 
HPSE                  0.005   heparanase 
LARGE                 0.005   like-glycosyltransferase 
LARGE                 0.005   like-glycosyltransferase 
DPP8                  0.005   dipeptidyl peptidase 8 isoform 4 
CHD6                  0.005   chromodomain helicase DNA binding protein 6 
PBLD                  0.005   MAWD binding protein isoform b 
PBLD                  0.005   MAWD binding protein isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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