Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 188595672
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|188595672 choline acetyltransferase isoform 1 [Homo sapiens]
(630 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|188595668 choline acetyltransferase isoform 1 [Homo sapiens] 1269 0.0
gi|218931226 choline acetyltransferase isoform 1 [Homo sapiens] 1269 0.0
gi|218931224 choline acetyltransferase isoform 3 [Homo sapiens] 1269 0.0
gi|218931221 choline acetyltransferase isoform 1 [Homo sapiens] 1269 0.0
gi|188595684 choline acetyltransferase isoform 1 [Homo sapiens] 1269 0.0
gi|188595672 choline acetyltransferase isoform 1 [Homo sapiens] 1269 0.0
gi|188595670 choline acetyltransferase isoform 2 [Homo sapiens] 1269 0.0
gi|21618331 carnitine acetyltransferase precursor [Homo sapiens] 476 e-134
gi|73623030 carnitine palmitoyltransferase 1A liver isoform 1 [H... 262 8e-70
gi|31542325 peroxisomal carnitine O-octanoyltransferase isoform ... 261 1e-69
gi|73623028 carnitine palmitoyltransferase 1A liver isoform 2 [H... 251 2e-66
gi|221316602 peroxisomal carnitine O-octanoyltransferase isoform... 246 4e-65
gi|223468672 carnitine palmitoyltransferase 1B isoform a [Homo s... 246 5e-65
gi|23238254 carnitine palmitoyltransferase 1B isoform a [Homo sa... 246 5e-65
gi|223468678 carnitine palmitoyltransferase 1B isoform a [Homo s... 246 5e-65
gi|4758050 carnitine palmitoyltransferase 1B isoform a [Homo sap... 246 5e-65
gi|23238256 carnitine palmitoyltransferase 1B isoform a [Homo sa... 246 5e-65
gi|4503023 carnitine O-palmitoyltransferase precursor [Homo sapi... 243 5e-64
gi|223468670 carnitine palmitoyltransferase 1B isoform c [Homo s... 229 8e-60
gi|209862905 carnitine palmitoyltransferase 1C isoform 1 [Homo s... 224 2e-58
gi|22748777 carnitine palmitoyltransferase 1C isoform 2 [Homo sa... 223 3e-58
gi|223468674 carnitine palmitoyltransferase 1B isoform d [Homo s... 150 3e-36
gi|153791514 tripartite motif-containing 32 [Homo sapiens] 36 0.094
gi|153792582 tripartite motif-containing 32 [Homo sapiens] 36 0.094
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 33 0.61
gi|170932518 paxillin isoform 3 [Homo sapiens] 32 1.8
gi|170932516 paxillin isoform 2 [Homo sapiens] 32 1.8
gi|170932514 paxillin isoform 1 [Homo sapiens] 32 1.8
gi|55743106 alpha 3 type VI collagen isoform 5 precursor [Homo s... 30 6.7
gi|55743098 alpha 3 type VI collagen isoform 1 precursor [Homo s... 30 6.7
>gi|188595668 choline acetyltransferase isoform 1 [Homo sapiens]
Length = 630
Score = 1269 bits (3283), Expect = 0.0
Identities = 630/630 (100%), Positives = 630/630 (100%)
Query: 1 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET
Sbjct: 1 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
Query: 61 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL
Sbjct: 61 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
Query: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM
Sbjct: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
Query: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR
Sbjct: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
Query: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA
Sbjct: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
Query: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP
Sbjct: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
Query: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA
Sbjct: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
Query: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL
Sbjct: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
Query: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS
Sbjct: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
Query: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM
Sbjct: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
Query: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
RDLCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
>gi|218931226 choline acetyltransferase isoform 1 [Homo sapiens]
Length = 630
Score = 1269 bits (3283), Expect = 0.0
Identities = 630/630 (100%), Positives = 630/630 (100%)
Query: 1 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET
Sbjct: 1 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
Query: 61 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL
Sbjct: 61 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
Query: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM
Sbjct: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
Query: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR
Sbjct: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
Query: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA
Sbjct: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
Query: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP
Sbjct: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
Query: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA
Sbjct: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
Query: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL
Sbjct: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
Query: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS
Sbjct: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
Query: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM
Sbjct: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
Query: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
RDLCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
>gi|218931224 choline acetyltransferase isoform 3 [Homo sapiens]
Length = 666
Score = 1269 bits (3283), Expect = 0.0
Identities = 630/630 (100%), Positives = 630/630 (100%)
Query: 1 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET
Sbjct: 37 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 96
Query: 61 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL
Sbjct: 97 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 156
Query: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM
Sbjct: 157 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 216
Query: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR
Sbjct: 217 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 276
Query: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA
Sbjct: 277 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 336
Query: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP
Sbjct: 337 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 396
Query: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA
Sbjct: 397 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 456
Query: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL
Sbjct: 457 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 516
Query: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS
Sbjct: 517 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 576
Query: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM
Sbjct: 577 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 636
Query: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
RDLCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 637 RDLCSLLPPTESKPLATKEKATRPSQGHQP 666
>gi|218931221 choline acetyltransferase isoform 1 [Homo sapiens]
Length = 630
Score = 1269 bits (3283), Expect = 0.0
Identities = 630/630 (100%), Positives = 630/630 (100%)
Query: 1 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET
Sbjct: 1 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
Query: 61 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL
Sbjct: 61 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
Query: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM
Sbjct: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
Query: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR
Sbjct: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
Query: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA
Sbjct: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
Query: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP
Sbjct: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
Query: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA
Sbjct: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
Query: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL
Sbjct: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
Query: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS
Sbjct: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
Query: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM
Sbjct: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
Query: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
RDLCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
>gi|188595684 choline acetyltransferase isoform 1 [Homo sapiens]
Length = 630
Score = 1269 bits (3283), Expect = 0.0
Identities = 630/630 (100%), Positives = 630/630 (100%)
Query: 1 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET
Sbjct: 1 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
Query: 61 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL
Sbjct: 61 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
Query: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM
Sbjct: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
Query: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR
Sbjct: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
Query: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA
Sbjct: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
Query: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP
Sbjct: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
Query: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA
Sbjct: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
Query: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL
Sbjct: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
Query: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS
Sbjct: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
Query: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM
Sbjct: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
Query: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
RDLCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
>gi|188595672 choline acetyltransferase isoform 1 [Homo sapiens]
Length = 630
Score = 1269 bits (3283), Expect = 0.0
Identities = 630/630 (100%), Positives = 630/630 (100%)
Query: 1 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET
Sbjct: 1 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
Query: 61 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL
Sbjct: 61 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
Query: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM
Sbjct: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
Query: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR
Sbjct: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
Query: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA
Sbjct: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
Query: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP
Sbjct: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
Query: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA
Sbjct: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
Query: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL
Sbjct: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
Query: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS
Sbjct: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
Query: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM
Sbjct: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
Query: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
RDLCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
>gi|188595670 choline acetyltransferase isoform 2 [Homo sapiens]
Length = 748
Score = 1269 bits (3283), Expect = 0.0
Identities = 630/630 (100%), Positives = 630/630 (100%)
Query: 1 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 60
MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET
Sbjct: 119 MAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGET 178
Query: 61 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 120
LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL
Sbjct: 179 LQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASL 238
Query: 121 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 180
ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM
Sbjct: 239 ISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIM 298
Query: 181 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 240
PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR
Sbjct: 299 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 358
Query: 241 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 300
SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA
Sbjct: 359 SEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGA 418
Query: 301 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 360
NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP
Sbjct: 419 NRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELP 478
Query: 361 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 420
APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA
Sbjct: 479 APRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVA 538
Query: 421 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 480
LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL
Sbjct: 539 LQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLL 598
Query: 481 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 540
LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS
Sbjct: 599 LLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTS 658
Query: 541 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 600
QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM
Sbjct: 659 QVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDM 718
Query: 601 RDLCSLLPPTESKPLATKEKATRPSQGHQP 630
RDLCSLLPPTESKPLATKEKATRPSQGHQP
Sbjct: 719 RDLCSLLPPTESKPLATKEKATRPSQGHQP 748
>gi|21618331 carnitine acetyltransferase precursor [Homo sapiens]
Length = 626
Score = 476 bits (1224), Expect = e-134
Identities = 258/605 (42%), Positives = 382/605 (63%), Gaps = 16/605 (2%)
Query: 8 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
+ + LP+LPVPPLQQ+L YL+ ++ +VSEE++ ++ +V +F A GG+GE LQ+ L
Sbjct: 30 AHQDALPRLPVPPLQQSLDHYLKALQPIVSEEEWAHTKQLVDEFQASGGVGERLQKGLER 89
Query: 68 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
R KT NW+SE+WL YL R + + SSP V+ +Q F QLRFAA LI GVL +
Sbjct: 90 RARKTENWLSEWWLKTAYLQYRQPVVIYSSPGVMLPKQDFVDLQGQLRFAAKLIEGVLDF 149
Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
K ++D+ ++P + L G+PLCM QYY + SS R+PG QDT V+ S P H+
Sbjct: 150 KVMIDNETLPVE----YLGGKPLCMNQYYQILSSCRVPGPKQDT-VSNFSKTKKPPTHIT 204
Query: 188 VACCNQFFVLDVV-INFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEA 246
V QFF LDV + L+ +F QL KI + ++ P+G+LTS+ R+ WA+A
Sbjct: 205 VVHNYQFFELDVYHSDGTPLTADQIFVQLEKIWNSSLQTNKE--PVGILTSNHRNSWAKA 262
Query: 247 RTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHR---ALQLLHGGGYSKNGANRW 303
L+KD NRDS+ I++ I VCLDA D +R A Q+LHGGG N NRW
Sbjct: 263 YNTLIKDKVNRDSVRSIQKSIFTVCLDATMPRVSEDVYRSHVAGQMLHGGGSRLNSGNRW 322
Query: 304 YDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELPAPR 363
+DK+LQF+V DG+CG+V EH+ +G +V ++++++ + +L+R+ V LP P+
Sbjct: 323 FDKTLQFIVAEDGSCGLVYEHAAAEGPPIVTLLDYVIEYTKKP--ELVRSPMV-PLPMPK 379
Query: 364 RLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQL 423
+LR+ +PEI+ + + + L ++++LD V F ++GK F K +K SPDAFIQ+ALQL
Sbjct: 380 KLRFNITPEIKSDIEKAKQNLSIMIQDLDITVMVFHHFGKDFPKSEKLSPDAFIQMALQL 439
Query: 424 AFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLLK 483
A+YR++ + TYESAS+R F GR D IRSA+ ++L FV+A+ D ++V +K+ LL+
Sbjct: 440 AYYRIYGQACATYESASLRMFHLGRTDTIRSASMDSLTFVKAMDD--SSVTEHQKVELLR 497
Query: 484 DAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTSQVP 543
A++A YT AI G A D HLL L+ A +P++FMD +Y ++ F LSTSQVP
Sbjct: 498 KAVQAHRGYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFHLSTSQVP 557
Query: 544 TTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDMRDL 603
T+ +GPVVP+GYG CYNP I F +S+++SC ET++++ A +E++L+DMR L
Sbjct: 558 AKTDCVMFFGPVVPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRAL 617
Query: 604 CSLLP 608
P
Sbjct: 618 LQSHP 622
>gi|73623030 carnitine palmitoyltransferase 1A liver isoform 1 [Homo
sapiens]
Length = 773
Score = 262 bits (669), Expect = 8e-70
Identities = 197/623 (31%), Positives = 304/623 (48%), Gaps = 45/623 (7%)
Query: 8 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
S ++ LP+LPVP ++ T+ YLQ +R L+ EE F++ A+ Q F GLG LQ L
Sbjct: 166 SFQTSLPRLPVPAVKDTVNRYLQSVRPLMKEEDFKRMTALAQDFAV--GLGPRLQWYLKL 223
Query: 68 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
+ N+VS++W +YL R L VNS+ + P T Q A + I +L Y
Sbjct: 224 KSWWATNYVSDWWEEYIYLRGRGPLMVNSNYYAMDLLYILP-THIQAARAGNAIHAILLY 282
Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
+ LD I G S PLC Q+ +F++ R+PG DT+ M + +H++
Sbjct: 283 RRKLDREEIKPIRLLG--STIPLCSAQWERMFNTSRIPGEETDTI-----QHMRDSKHIV 335
Query: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247
V ++F + + + R L ++ Q+++I+ S + LT+ R WA R
Sbjct: 336 VYHRGRYFKVWLYHDGRLLKPREMEQQMQRILDNTSEPQPGEARLAALTAGDRVPWARCR 395
Query: 248 TVLVKDSTNRDSLDMIERCICLVCLD-APGGVELSDTHRALQ-----LLHGGGYSKNGAN 301
N+ SLD +E+ V LD G D ++ LLHG Y +
Sbjct: 396 QAYFGRGKNKQSLDAVEKAAFFVTLDETEEGYRSEDPDTSMDSYAKSLLHGRCY-----D 450
Query: 302 RWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVS 357
RW+DKS FVV ++G G+ EHS D ++ E+++ + + + D
Sbjct: 451 RWFDKSFTFVVFKNGKMGLNAEHSWADAPIVAHLWEYVMSIDSLQLGYAEDGHCKGDINP 510
Query: 358 ELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFI 417
+P P RL+W E Q + +S + ++DF + F +GK IKK + SPDAF+
Sbjct: 511 NIPYPTRLQWDIPGECQEVIETSLNTANLLANDVDFHSFPFVAFGKGIIKKCRTSPDAFV 570
Query: 418 QVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASE 477
Q+ALQLA Y+ + TYE++ R F+EGR + +RS T E+ FVRA+ D A +
Sbjct: 571 QLALQLAHYKDMGKFCLTYEASMTRLFREGRTETVRSCTTESCDFVRAMVD--PAQTVEQ 628
Query: 478 KLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVL 537
+L L K A +A+TG ID HL L +++ + E P F+ E ++S + L
Sbjct: 629 RLKLFKLASEKHQHMYRLAMTGSGIDRHLFCLYVVSKYLAVESP--FLKE--VLSEPWRL 684
Query: 538 STSQVP-TTTEMFCC------------YGPVVPNGYGACYNPQPETIL-FCISSFHSCKE 583
STSQ P E+F +GPV +GYG Y E ++ F ISS SC E
Sbjct: 685 STSQTPQQQVELFDLENNPEYVSSGGGFGPVADDGYGVSYILVGENLINFHISSKFSCPE 744
Query: 584 TSSSKFAKAVEESLIDMRDLCSL 606
T S +F + ++E++ D+ L L
Sbjct: 745 TDSHRFGRHLKEAMTDIITLFGL 767
>gi|31542325 peroxisomal carnitine O-octanoyltransferase isoform 2
[Homo sapiens]
Length = 612
Score = 261 bits (668), Expect = 1e-69
Identities = 182/604 (30%), Positives = 299/604 (49%), Gaps = 24/604 (3%)
Query: 10 ESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLERQ 69
+ LP LPVP L+++L YL+ ++ ++E+++K++ IVQ+F + G+GE L QKLLER
Sbjct: 17 QDSLPSLPVPSLEESLKKYLESVKPFANQEEYKKTEEIVQKFQS--GIGEKLHQKLLERA 74
Query: 70 EKTANWVSEYWLNDMYLNNRLALPVN---SSPAVIFARQHFPGTDDQLRFAASLISGVLS 126
+ NW+ E+WLN YL+ R+ +N + PA F P QL + + L+
Sbjct: 75 KGKRNWLEEWWLNVAYLDVRIPSQLNVNFAGPAAHFEHYWPPKEGTQLERGSITLWHNLN 134
Query: 127 YKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVA--QNSSIMPEPE 184
Y LL +P ++ PL M Q+ LFS+ ++PG T+D+++ + S P
Sbjct: 135 YWQLLRKEKVPVH----KVGNTPLDMNQFRMLFSTCKVPGITRDSIMNYFRTESEGRSPN 190
Query: 185 HVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWA 244
H++V C + FV DV+ ++ +L QL I K +E + P I LTS+ R+ WA
Sbjct: 191 HIVVLCRGRAFVFDVIHEGCLVTPPELLRQLTYIHKKCHSEPDG-PGIAALTSEERTRWA 249
Query: 245 EARTVLVK-DSTNRDSLDMIERCICLVCL-DAPGGVELSDTHRALQLLHGGGYSKNGANR 302
+AR L+ D N L+ I+ + + + D+ V D + + G + R
Sbjct: 250 KAREYLIGLDPENLALLEKIQSSLLVYSMEDSSPHVTPEDYSEIIAAILIG----DPTVR 305
Query: 303 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTQSSRKLIRADSVSELPAP 362
W DKS + +G G C+H+PFD +++V + ++ + + Q+ + ++ V ++P P
Sbjct: 306 WGDKSYNLISFSNGVFGCNCDHAPFDAMIMVNISYYVDEKIFQNEGRWKGSEKVRDIPLP 365
Query: 363 RRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQ 422
L + ++ + + + R +L Y F ++GK K + PD FIQ+ALQ
Sbjct: 366 EELIFIVDEKVLNDINQAKAQYLREASDLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQ 425
Query: 423 LAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLL 482
LA+YRLH YE+A R F GR + +RS T EA+ + +++ D +V E+ +
Sbjct: 426 LAYYRLHGHPGCCYETAMTRHFYHGRTETMRSCTVEAVRWCQSMQD--PSVNLRERQQKM 483
Query: 483 KDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMS---NRFVLST 539
A G D HLL L +A+ +PE+F D + S FVLST
Sbjct: 484 LQAFAKHNKMMKDCSAGKGFDRHLLGLLLIAKEEGLPVPELFTDPLFSKSGGGGNFVLST 543
Query: 540 SQVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLID 599
S V P+V NGYG Y+ + + + S++ SC ET + K + + D
Sbjct: 544 SLVGYLRVQGVVV-PMVHNGYGFFYHIRDDRFVVACSAWKSCPETDAEKLVQLTFCAFHD 602
Query: 600 MRDL 603
M L
Sbjct: 603 MIQL 606
>gi|73623028 carnitine palmitoyltransferase 1A liver isoform 2 [Homo
sapiens]
Length = 756
Score = 251 bits (640), Expect = 2e-66
Identities = 191/601 (31%), Positives = 291/601 (48%), Gaps = 45/601 (7%)
Query: 8 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
S ++ LP+LPVP ++ T+ YLQ +R L+ EE F++ A+ Q F GLG LQ L
Sbjct: 166 SFQTSLPRLPVPAVKDTVNRYLQSVRPLMKEEDFKRMTALAQDFAV--GLGPRLQWYLKL 223
Query: 68 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
+ N+VS++W +YL R L VNS+ + P T Q A + I +L Y
Sbjct: 224 KSWWATNYVSDWWEEYIYLRGRGPLMVNSNYYAMDLLYILP-THIQAARAGNAIHAILLY 282
Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
+ LD I G S PLC Q+ +F++ R+PG DT+ M + +H++
Sbjct: 283 RRKLDREEIKPIRLLG--STIPLCSAQWERMFNTSRIPGEETDTI-----QHMRDSKHIV 335
Query: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247
V ++F + + + R L ++ Q+++I+ S + LT+ R WA R
Sbjct: 336 VYHRGRYFKVWLYHDGRLLKPREMEQQMQRILDNTSEPQPGEARLAALTAGDRVPWARCR 395
Query: 248 TVLVKDSTNRDSLDMIERCICLVCLD-APGGVELSDTHRALQ-----LLHGGGYSKNGAN 301
N+ SLD +E+ V LD G D ++ LLHG Y +
Sbjct: 396 QAYFGRGKNKQSLDAVEKAAFFVTLDETEEGYRSEDPDTSMDSYAKSLLHGRCY-----D 450
Query: 302 RWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVS 357
RW+DKS FVV ++G G+ EHS D ++ E+++ + + + D
Sbjct: 451 RWFDKSFTFVVFKNGKMGLNAEHSWADAPIVAHLWEYVMSIDSLQLGYAEDGHCKGDINP 510
Query: 358 ELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFI 417
+P P RL+W E Q + +S + ++DF + F +GK IKK + SPDAF+
Sbjct: 511 NIPYPTRLQWDIPGECQEVIETSLNTANLLANDVDFHSFPFVAFGKGIIKKCRTSPDAFV 570
Query: 418 QVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASE 477
Q+ALQLA Y+ + TYE++ R F+EGR + +RS T E+ FVRA+ D A +
Sbjct: 571 QLALQLAHYKDMGKFCLTYEASMTRLFREGRTETVRSCTTESCDFVRAMVD--PAQTVEQ 628
Query: 478 KLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVL 537
+L L K A +A+TG ID HL L +++ + E P F+ E ++S + L
Sbjct: 629 RLKLFKLASEKHQHMYRLAMTGSGIDRHLFCLYVVSKYLAVESP--FLKE--VLSEPWRL 684
Query: 538 STSQVP-TTTEMFCC------------YGPVVPNGYGACYNPQPETIL-FCISSFHSCKE 583
STSQ P E+F +GPV +GYG Y E ++ F ISS SC E
Sbjct: 685 STSQTPQQQVELFDLENNPEYVSSGGGFGPVADDGYGVSYILVGENLINFHISSKFSCPE 744
Query: 584 T 584
T
Sbjct: 745 T 745
>gi|221316602 peroxisomal carnitine O-octanoyltransferase isoform 1
[Homo sapiens]
Length = 640
Score = 246 bits (629), Expect = 4e-65
Identities = 182/632 (28%), Positives = 299/632 (47%), Gaps = 52/632 (8%)
Query: 10 ESGLPKLPVPPLQQTLATYLQCM----------------------------RHLVSEEQF 41
+ LP LPVP L+++L YL+ + + ++E++
Sbjct: 17 QDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTREGIQVKPFANQEEY 76
Query: 42 RKSQAIVQQFGAPGGLGETLQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVN---SSP 98
+K++ IVQ+F + G+GE L QKLLER + NW+ E+WLN YL+ R+ +N + P
Sbjct: 77 KKTEEIVQKFQS--GIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQLNVNFAGP 134
Query: 99 AVIFARQHFPGTDDQLRFAASLISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGL 158
A F P QL + + L+Y LL +P ++ PL M Q+ L
Sbjct: 135 AAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVH----KVGNTPLDMNQFRML 190
Query: 159 FSSYRLPGHTQDTLVA--QNSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLR 216
FS+ ++PG T+D+++ + S P H++V C + FV DV+ ++ +L QL
Sbjct: 191 FSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHEGCLVTPPELLRQLT 250
Query: 217 KIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVK-DSTNRDSLDMIERCICLVCL-DA 274
I K +E + P I LTS+ R+ WA+AR L+ D N L+ I+ + + + D+
Sbjct: 251 YIHKKCHSEPDG-PGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDS 309
Query: 275 PGGVELSDTHRALQLLHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQ 334
V D + + G + RW DKS + +G G C+H+PFD +++V
Sbjct: 310 SPHVTPEDYSEIIAAILIG----DPTVRWGDKSYNLISFSNGVFGCNCDHAPFDAMIMVN 365
Query: 335 CTEHLLKHMTQSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFI 394
+ ++ + + Q+ + ++ V ++P P L + ++ + + + R +L
Sbjct: 366 ISYYVDEKIFQNEGRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREASDLQIA 425
Query: 395 VYKFDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRS 454
Y F ++GK K + PD FIQ+ALQLA+YRLH YE+A R F GR + +RS
Sbjct: 426 AYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRTETMRS 485
Query: 455 ATPEALAFVRAVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELAR 514
T EA+ + +++ D +V E+ + A G D HLL L +A+
Sbjct: 486 CTVEAVRWCQSMQD--PSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLLIAK 543
Query: 515 AMCKELPEMFMDETYLMS---NRFVLSTSQVPTTTEMFCCYGPVVPNGYGACYNPQPETI 571
+PE+F D + S FVLSTS V P+V NGYG Y+ + +
Sbjct: 544 EEGLPVPELFTDPLFSKSGGGGNFVLSTSLVGYLRVQGVVV-PMVHNGYGFFYHIRDDRF 602
Query: 572 LFCISSFHSCKETSSSKFAKAVEESLIDMRDL 603
+ S++ SC ET + K + + DM L
Sbjct: 603 VVACSAWKSCPETDAEKLVQLTFCAFHDMIQL 634
>gi|223468672 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
Length = 772
Score = 246 bits (628), Expect = 5e-65
Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)
Query: 8 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
S ++ LPKLPVP + T+ YL+ +R L+ +E++ + + + ++F LQ+ L+
Sbjct: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225
Query: 68 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
+ +N+VS++W +YL R L VNS+ V+ TD Q ++I ++ Y
Sbjct: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284
Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
+ LD I A G + P+C Q +F++ R+PG +DT V Q+ S + HV
Sbjct: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336
Query: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247
V +FF L + R L DL Q ++I+ S + LT+ GR EWA+AR
Sbjct: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396
Query: 248 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 302
N+ +L+ IER V LD + +L L LHG Y NR
Sbjct: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451
Query: 303 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 358
W+DKS + ++G G+ EH+ D ++ E +L H+ +
Sbjct: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511
Query: 359 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 418
L P RL+W + Q + SS + + + +++ ++F +GK IKK + SPDAF+Q
Sbjct: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571
Query: 419 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 478
+ALQLA +R + TYE++ R F+EGR + +RS T E+ AFV+A+ + + A +
Sbjct: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630
Query: 479 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 538
L K A + Q Y +A+TG ID HL L +++ + P F+ E ++S + LS
Sbjct: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685
Query: 539 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 584
TSQ+P + MF +GPV +GYG Y E TI F ISS S ET
Sbjct: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745
Query: 585 SSSKFAKAVEESLIDMRDL 603
++ +F + ++L+D+ DL
Sbjct: 746 NAQRFGNHIRKALLDIADL 764
>gi|23238254 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
Length = 772
Score = 246 bits (628), Expect = 5e-65
Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)
Query: 8 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
S ++ LPKLPVP + T+ YL+ +R L+ +E++ + + + ++F LQ+ L+
Sbjct: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225
Query: 68 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
+ +N+VS++W +YL R L VNS+ V+ TD Q ++I ++ Y
Sbjct: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284
Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
+ LD I A G + P+C Q +F++ R+PG +DT V Q+ S + HV
Sbjct: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336
Query: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247
V +FF L + R L DL Q ++I+ S + LT+ GR EWA+AR
Sbjct: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396
Query: 248 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 302
N+ +L+ IER V LD + +L L LHG Y NR
Sbjct: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451
Query: 303 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 358
W+DKS + ++G G+ EH+ D ++ E +L H+ +
Sbjct: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511
Query: 359 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 418
L P RL+W + Q + SS + + + +++ ++F +GK IKK + SPDAF+Q
Sbjct: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571
Query: 419 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 478
+ALQLA +R + TYE++ R F+EGR + +RS T E+ AFV+A+ + + A +
Sbjct: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630
Query: 479 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 538
L K A + Q Y +A+TG ID HL L +++ + P F+ E ++S + LS
Sbjct: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685
Query: 539 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 584
TSQ+P + MF +GPV +GYG Y E TI F ISS S ET
Sbjct: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745
Query: 585 SSSKFAKAVEESLIDMRDL 603
++ +F + ++L+D+ DL
Sbjct: 746 NAQRFGNHIRKALLDIADL 764
>gi|223468678 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
Length = 772
Score = 246 bits (628), Expect = 5e-65
Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)
Query: 8 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
S ++ LPKLPVP + T+ YL+ +R L+ +E++ + + + ++F LQ+ L+
Sbjct: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225
Query: 68 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
+ +N+VS++W +YL R L VNS+ V+ TD Q ++I ++ Y
Sbjct: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284
Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
+ LD I A G + P+C Q +F++ R+PG +DT V Q+ S + HV
Sbjct: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336
Query: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247
V +FF L + R L DL Q ++I+ S + LT+ GR EWA+AR
Sbjct: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396
Query: 248 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 302
N+ +L+ IER V LD + +L L LHG Y NR
Sbjct: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451
Query: 303 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 358
W+DKS + ++G G+ EH+ D ++ E +L H+ +
Sbjct: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511
Query: 359 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 418
L P RL+W + Q + SS + + + +++ ++F +GK IKK + SPDAF+Q
Sbjct: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571
Query: 419 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 478
+ALQLA +R + TYE++ R F+EGR + +RS T E+ AFV+A+ + + A +
Sbjct: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630
Query: 479 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 538
L K A + Q Y +A+TG ID HL L +++ + P F+ E ++S + LS
Sbjct: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685
Query: 539 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 584
TSQ+P + MF +GPV +GYG Y E TI F ISS S ET
Sbjct: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745
Query: 585 SSSKFAKAVEESLIDMRDL 603
++ +F + ++L+D+ DL
Sbjct: 746 NAQRFGNHIRKALLDIADL 764
>gi|4758050 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
Length = 772
Score = 246 bits (628), Expect = 5e-65
Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)
Query: 8 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
S ++ LPKLPVP + T+ YL+ +R L+ +E++ + + + ++F LQ+ L+
Sbjct: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225
Query: 68 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
+ +N+VS++W +YL R L VNS+ V+ TD Q ++I ++ Y
Sbjct: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284
Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
+ LD I A G + P+C Q +F++ R+PG +DT V Q+ S + HV
Sbjct: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336
Query: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247
V +FF L + R L DL Q ++I+ S + LT+ GR EWA+AR
Sbjct: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396
Query: 248 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 302
N+ +L+ IER V LD + +L L LHG Y NR
Sbjct: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451
Query: 303 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 358
W+DKS + ++G G+ EH+ D ++ E +L H+ +
Sbjct: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511
Query: 359 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 418
L P RL+W + Q + SS + + + +++ ++F +GK IKK + SPDAF+Q
Sbjct: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571
Query: 419 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 478
+ALQLA +R + TYE++ R F+EGR + +RS T E+ AFV+A+ + + A +
Sbjct: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630
Query: 479 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 538
L K A + Q Y +A+TG ID HL L +++ + P F+ E ++S + LS
Sbjct: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685
Query: 539 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 584
TSQ+P + MF +GPV +GYG Y E TI F ISS S ET
Sbjct: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745
Query: 585 SSSKFAKAVEESLIDMRDL 603
++ +F + ++L+D+ DL
Sbjct: 746 NAQRFGNHIRKALLDIADL 764
>gi|23238256 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
Length = 772
Score = 246 bits (628), Expect = 5e-65
Identities = 192/619 (31%), Positives = 306/619 (49%), Gaps = 45/619 (7%)
Query: 8 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
S ++ LPKLPVP + T+ YL+ +R L+ +E++ + + + ++F LQ+ L+
Sbjct: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225
Query: 68 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
+ +N+VS++W +YL R L VNS+ V+ TD Q ++I ++ Y
Sbjct: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMY 284
Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
+ LD I A G + P+C Q +F++ R+PG +DT V Q+ S + HV
Sbjct: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336
Query: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247
V +FF L + R L DL Q ++I+ S + LT+ GR EWA+AR
Sbjct: 337 VYHKGRFFKLWLYEGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQAR 396
Query: 248 TVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANR 302
N+ +L+ IER V LD + +L L LHG Y NR
Sbjct: 397 QAFFSSGKNKAALEAIERAAFFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NR 451
Query: 303 WYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSE 358
W+DKS + ++G G+ EH+ D ++ E +L H+ +
Sbjct: 452 WFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPA 511
Query: 359 LPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQ 418
L P RL+W + Q + SS + + + +++ ++F +GK IKK + SPDAF+Q
Sbjct: 512 LAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQ 571
Query: 419 VALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEK 478
+ALQLA +R + TYE++ R F+EGR + +RS T E+ AFV+A+ + + A +
Sbjct: 572 IALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLR 630
Query: 479 LLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLS 538
L K A + Q Y +A+TG ID HL L +++ + P F+ E ++S + LS
Sbjct: 631 DLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLS 685
Query: 539 TSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKET 584
TSQ+P + MF +GPV +GYG Y E TI F ISS S ET
Sbjct: 686 TSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSET 745
Query: 585 SSSKFAKAVEESLIDMRDL 603
++ +F + ++L+D+ DL
Sbjct: 746 NAQRFGNHIRKALLDIADL 764
>gi|4503023 carnitine O-palmitoyltransferase precursor [Homo
sapiens]
Length = 658
Score = 243 bits (619), Expect = 5e-64
Identities = 184/629 (29%), Positives = 305/629 (48%), Gaps = 61/629 (9%)
Query: 10 ESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKL--LE 67
+ LP+LP+P L+ T+ YL + L+++ QFRK++ + F G+G+ L ++L L+
Sbjct: 46 QDSLPRLPIPKLEDTIRRYLSAQKPLLNDGQFRKTEQFCKSF--ENGIGKELHEQLVALD 103
Query: 68 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
+Q K +++S W DMYL+ R ++ +N +P + F +DQL A ++ + +
Sbjct: 104 KQNKHTSYISGPWF-DMYLSARDSVVLNFNPFMAFNPDPKSEYNDQLTRATNMTVSAIRF 162
Query: 128 -----KALLDSHSIPTDCAKGQ----------------------LSGQPLCMKQYYGLFS 160
LL+ + AK ++ PL M QY+ LF+
Sbjct: 163 LKTLRAGLLEPEVFHLNPAKSDTITFKRLIRFVPSSLSWYGAYLVNAYPLDMSQYFRLFN 222
Query: 161 SYRLPGHTQDTLVAQNSSIMPEPEHVIVACCNQFFVLDVVINFRRL-SEGDLFTQLRKIV 219
S RLP ++D L + + H++V F++ DV+ + S ++ L+ I+
Sbjct: 223 STRLPKPSRDELFTDDKA-----RHLLVLRKGNFYIFDVLDQDGNIVSPSEIQAHLKYIL 277
Query: 220 KMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVE 279
+S E P+ LTS+ R WAE R L+ S N +SL ++ + +CLD +
Sbjct: 278 SDSSPAPEF--PLAYLTSENRDIWAELRQKLMS-SGNEESLRKVDSAVFCLCLDDFPIKD 334
Query: 280 LSDTHRALQLLHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHL 339
L H + +LHG +G NRW+DKS ++ +DG+ V EHS DG+ +++ +
Sbjct: 335 L--VHLSHNMLHG-----DGTNRWFDKSFNLIIAKDGSTAVHFEHSWGDGVAVLRFFNEV 387
Query: 340 LKHMTQSSRKLIRAD--SVSELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYK 397
K TQ+ ++ + ++L ++ + ++ + ++ EK +K L +
Sbjct: 388 FKDSTQTPAVTPQSQPATTDSTVTVQKLNFELTDALKTGITAAKEKFDATMKTLTIDCVQ 447
Query: 398 FDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATP 457
F GK F+KKQK SPDA Q+A Q+AF R + + V TYES S F+ GR + IR A+
Sbjct: 448 FQRGGKEFLKKQKLSPDAVAQLAFQMAFLRQYGQTVATYESCSTAAFKHGRTETIRPASV 507
Query: 458 E----ALAFVRAVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELA 513
+ AFVR + H A E ++ + + T A G D HL ALR LA
Sbjct: 508 YTKRCSEAFVREPSRHS----AGELQQMMVECSKYHGQLTKEAAMGQGFDRHLFALRHLA 563
Query: 514 RAMCKELPEMFMDETYLMSNRFVLSTSQVPTTTEMFCCYGPVVPNGYGACYNPQPETILF 573
A LPE+++D Y N VLSTS + + + PVV +G+G Y I
Sbjct: 564 AAKGIILPELYLDPAYGQINHNVLSTSTLSSPAVNLGGFAPVVSDGFGVGYAVHDNWIGC 623
Query: 574 CISSFHSCKETSSSKFAKAVEESLIDMRD 602
+SS+ ++ +F + VE++L DM D
Sbjct: 624 NVSSYPG---RNAREFLQCVEKALEDMFD 649
>gi|223468670 carnitine palmitoyltransferase 1B isoform c [Homo
sapiens]
Length = 738
Score = 229 bits (583), Expect = 8e-60
Identities = 183/599 (30%), Positives = 293/599 (48%), Gaps = 45/599 (7%)
Query: 28 YLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLERQEKTANWVSEYWLNDMYLN 87
YL+ +R L+ +E++ + + + ++F LQ+ L+ + +N+VS++W +YL
Sbjct: 154 YLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVLKSWWASNYVSDWWEEYIYLR 211
Query: 88 NRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSYKALLDSHSIPTDCAKGQLSG 147
R L VNS+ V+ TD Q ++I ++ Y+ LD I A G +
Sbjct: 212 GRSPLMVNSNYYVMDLVL-IKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMALGIV-- 268
Query: 148 QPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVIVACCNQFFVLDVVINFRRLS 207
P+C Q +F++ R+PG +DT V Q+ S + HV V +FF L + R L
Sbjct: 269 -PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVAVYHKGRFFKLWLYEGARLLK 322
Query: 208 EGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMIERCI 267
DL Q ++I+ S + LT+ GR EWA+AR N+ +L+ IER
Sbjct: 323 PQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFSSGKNKAALEAIERAA 382
Query: 268 CLVCLDAPGGVELSDTHRALQL-----LHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVC 322
V LD + +L L LHG Y NRW+DKS + ++G G+
Sbjct: 383 FFVALDEESYSYDPEDEASLSLYGKALLHGNCY-----NRWFDKSFTLISFKNGQLGLNA 437
Query: 323 EHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLA 378
EH+ D ++ E +L H+ + L P RL+W + Q +
Sbjct: 438 EHAWADAPIIGHLWEFVLGTDSFHLGYTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIE 497
Query: 379 SSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYES 438
SS + + + +++ ++F +GK IKK + SPDAF+Q+ALQLA +R + TYE+
Sbjct: 498 SSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEA 557
Query: 439 ASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAIT 498
+ R F+EGR + +RS T E+ AFV+A+ + + A + L K A + Q Y +A+T
Sbjct: 558 SMTRMFREGRTETVRSCTSESTAFVQAMME-GSHTKADLRDLFQKAAKKHQNMYR-LAMT 615
Query: 499 GMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTSQVP-TTTEMF-------- 549
G ID HL L +++ + P F+ E ++S + LSTSQ+P + MF
Sbjct: 616 GAGIDRHLFCLYLVSKYLGVSSP--FLAE--VLSEPWRLSTSQIPQSQIRMFDPEQHPNH 671
Query: 550 ----CCYGPVVPNGYGACYNPQPE-TILFCISSFHSCKETSSSKFAKAVEESLIDMRDL 603
+GPV +GYG Y E TI F ISS S ET++ +F + ++L+D+ DL
Sbjct: 672 LGAGGGFGPVADDGYGVSYMIAGENTIFFHISSKFSSSETNAQRFGNHIRKALLDIADL 730
>gi|209862905 carnitine palmitoyltransferase 1C isoform 1 [Homo
sapiens]
Length = 792
Score = 224 bits (571), Expect = 2e-58
Identities = 182/615 (29%), Positives = 292/615 (47%), Gaps = 49/615 (7%)
Query: 8 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
S + LP+ PVP +Q T+ YL+ +R ++S+E F + + Q+F LQ L
Sbjct: 166 SYQRSLPRQPVPSVQDTVRKYLESVRPILSDEDFDWTAVLAQEFLRLQA--SLLQWYLRL 223
Query: 68 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
+ +N+VS++W +YL +R L VNS+ ++ AR A + + +L Y
Sbjct: 224 KSWWASNYVSDWWEEFVYLRSRNPLMVNSNYYMMAAR------------AGNAVHALLLY 271
Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
+ L+ IP G +PLC QY +F++ R+PG +D + + S +HV
Sbjct: 272 RHRLNRQEIPPTLLMGM---RPLCSAQYEKIFNTTRIPGVQKDYIRHLHDS-----QHVA 323
Query: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247
V +FF + LS L Q ++I+ S + LT+ R WA+ R
Sbjct: 324 VFHRGRFFRMGTHSRNSLLSPRALEQQFQRILDDPSPACPHEEHLAALTAAPRGTWAQVR 383
Query: 248 TVLVKDSTNRDSLDMIERCICLVCLDA-PGGVELSDTHRALQLLHGGGYSKNGANRWYDK 306
T L + ++L+ +E V LDA P G+ D +L + G +RW+DK
Sbjct: 384 TSLKTQAA--EALEAVEGAAFFVSLDAEPAGLTREDPAASLDAYAHALLAGRGHDRWFDK 441
Query: 307 SLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSELPAP 362
S +V +G G+ EHS D + E L + S+ + LP P
Sbjct: 442 SFTLIVFSNGKLGLSVEHSWADCPISGHMWEFTLATECFQLGYSTDGHCKGHPDPTLPQP 501
Query: 363 RRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQ 422
+RL+W +I ++ + + + +N+D V F +GK+FI++ S D+FIQ+ALQ
Sbjct: 502 QRLQWDLPDQIHSSISLALRGAKILSENVDCHVVPFSLFGKSFIRRCHLSSDSFIQIALQ 561
Query: 423 LAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLL 482
LA +R + TYESA R F EGR + +RS T EA FVRA+ D + P + L L
Sbjct: 562 LAHFRDRGQFCLTYESAMTRLFLEGRTETVRSCTREACNFVRAMEDKEKTDP--QCLALF 619
Query: 483 KDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTSQV 542
+ A+ A A++G +D HL AL ++R + + P + T + S ++ LSTSQ+
Sbjct: 620 RVAVDKHQALLKAAMSGQGVDRHLFALYIVSRFLHLQSPFL----TQVHSEQWQLSTSQI 675
Query: 543 PT-TTEMFCC------------YGPVVPNGYGACYNPQPE-TILFCISSFHSCKETSSSK 588
P +F +GP +GYG Y + I F ISS S +T S +
Sbjct: 676 PVQQMHLFDVHNYPDYVSSGGGFGPADDHGYGVSYIFMGDGMITFHISSKKSSTKTDSHR 735
Query: 589 FAKAVEESLIDMRDL 603
+ +E++L+D+ L
Sbjct: 736 LGQHIEDALLDVASL 750
>gi|22748777 carnitine palmitoyltransferase 1C isoform 2 [Homo
sapiens]
Length = 803
Score = 223 bits (569), Expect = 3e-58
Identities = 183/615 (29%), Positives = 293/615 (47%), Gaps = 38/615 (6%)
Query: 8 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
S + LP+ PVP +Q T+ YL+ +R ++S+E F + + Q+F LQ L
Sbjct: 166 SYQRSLPRQPVPSVQDTVRKYLESVRPILSDEDFDWTAVLAQEFLRLQA--SLLQWYLRL 223
Query: 68 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
+ +N+VS++W +YL +R L VNS+ ++ P T Q A + + +L Y
Sbjct: 224 KSWWASNYVSDWWEEFVYLRSRNPLMVNSNYYMMDFLYVTP-TPLQAARAGNAVHALLLY 282
Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
+ L+ IP G +PLC QY +F++ R+PG +D + + S +HV
Sbjct: 283 RHRLNRQEIPPTLLMGM---RPLCSAQYEKIFNTTRIPGVQKDYIRHLHDS-----QHVA 334
Query: 188 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEAR 247
V +FF + LS L Q ++I+ S + LT+ R WA+ R
Sbjct: 335 VFHRGRFFRMGTHSRNSLLSPRALEQQFQRILDDPSPACPHEEHLAALTAAPRGTWAQVR 394
Query: 248 TVLVKDSTNRDSLDMIERCICLVCLDA-PGGVELSDTHRALQLLHGGGYSKNGANRWYDK 306
T L + ++L+ +E V LDA P G+ D +L + G +RW+DK
Sbjct: 395 TSLKTQAA--EALEAVEGAAFFVSLDAEPAGLTREDPAASLDAYAHALLAGRGHDRWFDK 452
Query: 307 SLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMTQSSRKLIRADSVSELPAP 362
S +V +G G+ EHS D + E L + S+ + LP P
Sbjct: 453 SFTLIVFSNGKLGLSVEHSWADCPISGHMWEFTLATECFQLGYSTDGHCKGHPDPTLPQP 512
Query: 363 RRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQ 422
+RL+W +I ++ + + + +N+D V F +GK+FI++ S D+FIQ+ALQ
Sbjct: 513 QRLQWDLPDQIHSSISLALRGAKILSENVDCHVVPFSLFGKSFIRRCHLSSDSFIQIALQ 572
Query: 423 LAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLL 482
LA +R + TYESA R F EGR + +RS T EA FVRA+ D + P + L L
Sbjct: 573 LAHFRDRGQFCLTYESAMTRLFLEGRTETVRSCTREACNFVRAMEDKEKTDP--QCLALF 630
Query: 483 KDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTSQV 542
+ A+ A A++G +D HL AL ++R + + P + T + S ++ LSTSQ+
Sbjct: 631 RVAVDKHQALLKAAMSGQGVDRHLFALYIVSRFLHLQSPFL----TQVHSEQWQLSTSQI 686
Query: 543 PT-TTEMFCC------------YGPVVPNGYGACYNPQPE-TILFCISSFHSCKETSSSK 588
P +F +GP +GYG Y + I F ISS S +T S +
Sbjct: 687 PVQQMHLFDVHNYPDYVSSGGGFGPADDHGYGVSYIFMGDGMITFHISSKKSSTKTDSHR 746
Query: 589 FAKAVEESLIDMRDL 603
+ +E++L+D+ L
Sbjct: 747 LGQHIEDALLDVASL 761
>gi|223468674 carnitine palmitoyltransferase 1B isoform d [Homo
sapiens]
Length = 691
Score = 150 bits (379), Expect = 3e-36
Identities = 109/333 (32%), Positives = 171/333 (51%), Gaps = 29/333 (8%)
Query: 289 LLHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLK----HMT 344
LLHG Y NRW+DKS + ++G G+ EH+ D ++ E +L H+
Sbjct: 362 LLHGNCY-----NRWFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEFVLGTDSFHLG 416
Query: 345 QSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKT 404
+ L P RL+W + Q + SS + + + +++ ++F +GK
Sbjct: 417 YTETGHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKG 476
Query: 405 FIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVR 464
IKK + SPDAF+Q+ALQLA +R + TYE++ R F+EGR + +RS T E+ AFV+
Sbjct: 477 LIKKCRTSPDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQ 536
Query: 465 AVTDHKAAVPASEKLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMF 524
A+ + + A + L K A + Q Y +A+TG ID HL L +++ + P F
Sbjct: 537 AMME-GSHTKADLRDLFQKAAKKHQNMYR-LAMTGAGIDRHLFCLYLVSKYLGVSSP--F 592
Query: 525 MDETYLMSNRFVLSTSQVP-TTTEMF------------CCYGPVVPNGYGACYNPQPE-T 570
+ E ++S + LSTSQ+P + MF +GPV +GYG Y E T
Sbjct: 593 LAE--VLSEPWRLSTSQIPQSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGENT 650
Query: 571 ILFCISSFHSCKETSSSKFAKAVEESLIDMRDL 603
I F ISS S ET++ +F + ++L+D+ DL
Sbjct: 651 IFFHISSKFSSSETNAQRFGNHIRKALLDIADL 683
Score = 77.8 bits (190), Expect = 3e-14
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 8 SEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLE 67
S ++ LPKLPVP + T+ YL+ +R L+ +E++ + + + ++F LQ+ L+
Sbjct: 168 SFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEF--QDKTAPRLQKYLVL 225
Query: 68 RQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSY 127
+ +N+VS++W +YL R L VNS+ + TD Q ++I ++ Y
Sbjct: 226 KSWWASNYVSDWWEEYIYLRGRSPLMVNSN-YYVMDLVLIKNTDVQAARLGNIIHAMIMY 284
Query: 128 KALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEPEHVI 187
+ LD I A G + P+C Q +F++ R+PG +DT V Q+ S + HV
Sbjct: 285 RRKLDREEIKPVMALGIV---PMCSYQMERMFNTTRIPG--KDTDVLQHLS---DSRHVA 336
Query: 188 VACCNQFFVLDVVINFRRLS 207
V +FF L + R LS
Sbjct: 337 VYHKGRFFKLWLYEGARLLS 356
>gi|153791514 tripartite motif-containing 32 [Homo sapiens]
Length = 653
Score = 36.2 bits (82), Expect = 0.094
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 19/81 (23%)
Query: 265 RCICLVCLDAPGGVELSDTHRALQLLH---GGGYSKNGANRWYDKSLQFVVGRDG-TCGV 320
RCI +C+DA G + ++D+ R ++LH GGGYS V+ R+G TC V
Sbjct: 576 RCIAGMCVDARGDLIVADSSRK-EILHFPKGGGYS--------------VLIREGLTCPV 620
Query: 321 VCEHSPFDGIVLVQCTEHLLK 341
+P ++++ C +H +K
Sbjct: 621 GIALTPKGQLLVLDCWDHCIK 641
>gi|153792582 tripartite motif-containing 32 [Homo sapiens]
Length = 653
Score = 36.2 bits (82), Expect = 0.094
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 19/81 (23%)
Query: 265 RCICLVCLDAPGGVELSDTHRALQLLH---GGGYSKNGANRWYDKSLQFVVGRDG-TCGV 320
RCI +C+DA G + ++D+ R ++LH GGGYS V+ R+G TC V
Sbjct: 576 RCIAGMCVDARGDLIVADSSRK-EILHFPKGGGYS--------------VLIREGLTCPV 620
Query: 321 VCEHSPFDGIVLVQCTEHLLK 341
+P ++++ C +H +K
Sbjct: 621 GIALTPKGQLLVLDCWDHCIK 641
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 33.5 bits (75), Expect = 0.61
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 537 LSTSQVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEES 596
++ S+ T EM C VP G G C + +P+ + + S +E SS +F ++E+
Sbjct: 1282 VAPSESQPTLEMSDCD---VPAGEGQCPSLEPQEAVPVLGSTCFLEEASSDQFLPSLEDP 1338
Query: 597 LIDMRDLCSLLPPTESKPL 615
L M L + +++PL
Sbjct: 1339 LAGMNALAAAAELPQARPL 1357
>gi|170932518 paxillin isoform 3 [Homo sapiens]
Length = 424
Score = 32.0 bits (71), Expect = 1.8
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 147 GQPLCMKQYYGLFS--SYRLPGHTQDTLVAQNSSIMPEPEHVIVACCNQFF 195
GQP C K Y+ LFS Y G D +V PEH A C FF
Sbjct: 234 GQPYCEKDYHNLFSPRCYYCNGPILDKVVTALDRTW-HPEHFFCAQCGAFF 283
>gi|170932516 paxillin isoform 2 [Homo sapiens]
Length = 557
Score = 32.0 bits (71), Expect = 1.8
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 147 GQPLCMKQYYGLFS--SYRLPGHTQDTLVAQNSSIMPEPEHVIVACCNQFF 195
GQP C K Y+ LFS Y G D +V PEH A C FF
Sbjct: 367 GQPYCEKDYHNLFSPRCYYCNGPILDKVVTALDRTW-HPEHFFCAQCGAFF 416
>gi|170932514 paxillin isoform 1 [Homo sapiens]
Length = 591
Score = 32.0 bits (71), Expect = 1.8
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 147 GQPLCMKQYYGLFS--SYRLPGHTQDTLVAQNSSIMPEPEHVIVACCNQFF 195
GQP C K Y+ LFS Y G D +V PEH A C FF
Sbjct: 401 GQPYCEKDYHNLFSPRCYYCNGPILDKVVTALDRTW-HPEHFFCAQCGAFF 450
>gi|55743106 alpha 3 type VI collagen isoform 5 precursor [Homo
sapiens]
Length = 2971
Score = 30.0 bits (66), Expect = 6.7
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 539 TSQVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSK--FAKAVEES 596
TS TTT+ PV +P TI+ S + + + +K AK V
Sbjct: 2661 TSNPVTTTKPVTTTKPVTTTTKPVTTTTKPVTIINQPSVKPAAAKPAPAKPVAAKPVATK 2720
Query: 597 LIDMRDLCSLLPPTESKPLATKEKATRP 624
+ +R ++ P T +KP+A K A RP
Sbjct: 2721 MATVRPPVAVKPATAAKPVAAKPAAVRP 2748
>gi|55743098 alpha 3 type VI collagen isoform 1 precursor [Homo
sapiens]
Length = 3177
Score = 30.0 bits (66), Expect = 6.7
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 539 TSQVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSK--FAKAVEES 596
TS TTT+ PV +P TI+ S + + + +K AK V
Sbjct: 2867 TSNPVTTTKPVTTTKPVTTTTKPVTTTTKPVTIINQPSVKPAAAKPAPAKPVAAKPVATK 2926
Query: 597 LIDMRDLCSLLPPTESKPLATKEKATRP 624
+ +R ++ P T +KP+A K A RP
Sbjct: 2927 MATVRPPVAVKPATAAKPVAAKPAAVRP 2954
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,899,163
Number of Sequences: 37866
Number of extensions: 1090546
Number of successful extensions: 2559
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2418
Number of HSP's gapped (non-prelim): 49
length of query: 630
length of database: 18,247,518
effective HSP length: 108
effective length of query: 522
effective length of database: 14,157,990
effective search space: 7390470780
effective search space used: 7390470780
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.