CHAT 13820

Name: CHAT	Sequence: fasta or formatted (630aa)		NCBI GI: 218931221
Description: choline acetyltransferase isoform 1		Referenced in: Acetylcholine
Other entries for this name: alt mRNA [630aa] choline acetyltransferase isoform 1 alt prot [748aa] choline acetyltransferase isoform 2 alt mRNA [630aa] choline acetyltransferase isoform 1 alt mRNA [630aa] choline acetyltransferase isoform 1 alt prot [666aa] choline acetyltransferase isoform 3 alt mRNA [630aa] choline acetyltransferase isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 49 2 C cysteine 3.2 20 2 D aspartate 4.6 29 2 E glutamate 5.9 37 2 F phenylalanine 4.0 25 2 G glycine 5.1 32 3 H histidine 2.5 16 1 I isoleucine 4.1 26 1 K lysine 5.2 33 2 L leucine 11.3 71 4 M methionine 2.5 16 1 N asparagine 3.0 19 2 P proline 5.7 36 2 Q glutamine 5.4 34 2 R arginine 6.0 38 2 S serine 8.4 53 3 T threonine 5.4 34 3 V valine 6.2 39 2 W tryptophan 0.8 5 1 Y tyrosine 2.9 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 choline acetyltransferase isoform 1 CHAT 1.000 choline acetyltransferase isoform 1 CHAT 1.000 choline acetyltransferase isoform 1 CHAT 1.000 choline acetyltransferase isoform 3 CHAT 1.000 choline acetyltransferase isoform 1 CHAT 1.000 choline acetyltransferase isoform 1 CHAT 1.000 choline acetyltransferase isoform 2 CRAT 0.363 carnitine acetyltransferase precursor CPT1A 0.191 carnitine palmitoyltransferase 1A liver isoform 1 [H... CROT 0.190 peroxisomal carnitine O-octanoyltransferase isoform ... CPT1A 0.182 carnitine palmitoyltransferase 1A liver isoform 2 [H... CROT 0.178 peroxisomal carnitine O-octanoyltransferase isoform... CPT1B 0.178 carnitine palmitoyltransferase 1B isoform a CPT1B 0.178 carnitine palmitoyltransferase 1B isoform a CPT1B 0.178 carnitine palmitoyltransferase 1B isoform a CPT1B 0.178 carnitine palmitoyltransferase 1B isoform a CPT1B 0.178 carnitine palmitoyltransferase 1B isoform a CPT2 0.175 carnitine O-palmitoyltransferase precursor CPT1B 0.164 carnitine palmitoyltransferase 1B isoform c CPT1C 0.160 carnitine palmitoyltransferase 1C isoform 1 CPT1C 0.159 carnitine palmitoyltransferase 1C isoform 2 CPT1B 0.100 carnitine palmitoyltransferase 1B isoform d TRIM32 0.009 tripartite motif-containing 32 TRIM32 0.009 tripartite motif-containing 32 TNRC18 0.006 trinucleotide repeat containing 18 PXN 0.006 paxillin isoform 3 PXN 0.006 paxillin isoform 2 PXN 0.006 paxillin isoform 1 COL6A3 0.004 alpha 3 type VI collagen isoform 5 precursor COL6A3 0.004 alpha 3 type VI collagen isoform 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.