Search of human proteins with 188536108

Search of human proteins with 188536108

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|188536108 cardiolipin synthase 1 isoform 2 [Homo sapiens]
         (202 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|188536108 cardiolipin synthase 1 isoform 2 [Homo sapiens]          402   e-112
gi|10092647 cardiolipin synthase 1 isoform 1 [Homo sapiens]           395   e-110
gi|5453906 CDP-diacylglycerol-inositol 3-phosphatidyltransferase...    34   0.097
gi|16905507 progressive ankylosis protein [Homo sapiens]               30   1.4  
gi|5174633 receptor for egg jelly-like protein precursor [Homo s...    27   9.0  

>gi|188536108 cardiolipin synthase 1 isoform 2 [Homo sapiens]
          Length = 202

 Score =  402 bits (1033), Expect = e-112
 Identities = 202/202 (100%), Positives = 202/202 (100%)

Query: 1   MPQYENPWTIPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWAN 60
           MPQYENPWTIPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWAN
Sbjct: 1   MPQYENPWTIPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWAN 60

Query: 61  QRSALGSALDPLADKILISILYVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPT 120
           QRSALGSALDPLADKILISILYVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPT
Sbjct: 61  QRSALGSALDPLADKILISILYVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPT 120

Query: 121 PRTLAKYFNPCYATARLKPTFISKVNTAVQLILVAASLAAPVFNYADSIYLQILWCFTAF 180
           PRTLAKYFNPCYATARLKPTFISKVNTAVQLILVAASLAAPVFNYADSIYLQILWCFTAF
Sbjct: 121 PRTLAKYFNPCYATARLKPTFISKVNTAVQLILVAASLAAPVFNYADSIYLQILWCFTAF 180

Query: 181 TTAASAYSYYHYGRKTVQVIKD 202
           TTAASAYSYYHYGRKTVQVIKD
Sbjct: 181 TTAASAYSYYHYGRKTVQVIKD 202


>gi|10092647 cardiolipin synthase 1 isoform 1 [Homo sapiens]
          Length = 301

 Score =  395 bits (1016), Expect = e-110
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 4   YENPWTIPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRS 63
           YENPWTIPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRS
Sbjct: 103 YENPWTIPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRS 162

Query: 64  ALGSALDPLADKILISILYVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPTPRT 123
           ALGSALDPLADKILISILYVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPTPRT
Sbjct: 163 ALGSALDPLADKILISILYVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPTPRT 222

Query: 124 LAKYFNPCYATARLKPTFISKVNTAVQLILVAASLAAPVFNYADSIYLQILWCFTAFTTA 183
           LAKYFNPCYATARLKPTFISKVNTAVQLILVAASLAAPVFNYADSIYLQILWCFTAFTTA
Sbjct: 223 LAKYFNPCYATARLKPTFISKVNTAVQLILVAASLAAPVFNYADSIYLQILWCFTAFTTA 282

Query: 184 ASAYSYYHYGRKTVQVIKD 202
           ASAYSYYHYGRKTVQVIKD
Sbjct: 283 ASAYSYYHYGRKTVQVIKD 301


>gi|5453906 CDP-diacylglycerol-inositol 3-phosphatidyltransferase
          [Homo sapiens]
          Length = 213

 Score = 33.9 bits (76), Expect = 0.097
 Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)

Query: 10 IPNMLSMTRIGLAPVLGYLIIEEDFNIALGVFALAGLTDLLDGFIARNWANQRSALGSAL 69
          +PN++   RI  A ++ +  +      A   + L+GL D  DG  AR   NQ +  G+ L
Sbjct: 10 VPNLIGYARIVFA-IISFYFMPCCPLTASSFYLLSGLLDAFDGHAARA-LNQGTRFGAML 67

Query: 70 DPLADKILISILYVSL 85
          D L D+     L V+L
Sbjct: 68 DMLTDRCSTMCLLVNL 83


>gi|16905507 progressive ankylosis protein [Homo sapiens]
          Length = 492

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 19/87 (21%)

Query: 72  LADKILISILYVSLTYADLIPVPLTYMIISRDVMLIAAVFYVRYRTLPTPRTLAKYFNPC 131
           +++KILI I+ V   +A+L  VPL                   +   P P T+  +    
Sbjct: 348 VSEKILIDIIGVDFAFAELCVVPLRI-----------------FSFFPVPVTVRAHLTGW 390

Query: 132 YATARLKPTFISKVNTAVQLILVAASL 158
             T  LK TF+   ++ +++I++ ASL
Sbjct: 391 LMT--LKKTFVLAPSSVLRIIVLIASL 415


>gi|5174633 receptor for egg jelly-like protein precursor [Homo
           sapiens]
          Length = 2253

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 4/92 (4%)

Query: 30  IEEDFNIALGVFALAGLTDLLDGFIARNWANQRSALGSA-LDPLADKILISILYVSLTYA 88
           +E +F+I+L +   +G+T +       N   Q   +G   ++P     LI+   V  +  
Sbjct: 531 LEAEFSISLYLACWSGVTSVFRHSFIINHGPQ---IGECKINPAKGIALITKFVVQCSNF 587

Query: 89  DLIPVPLTYMIISRDVMLIAAVFYVRYRTLPT 120
               VPLTY II  D+  +  +  V+  TL T
Sbjct: 588 RDKHVPLTYKIIVSDLHSVGEISSVKENTLGT 619


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.139    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,263,888
Number of Sequences: 37866
Number of extensions: 225807
Number of successful extensions: 625
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 622
Number of HSP's gapped (non-prelim): 5
length of query: 202
length of database: 18,247,518
effective HSP length: 97
effective length of query: 105
effective length of database: 14,574,516
effective search space: 1530324180
effective search space used: 1530324180
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.