Guide to the Human Genome
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Name: CRLS1 Sequence: fasta or formatted (301aa) NCBI GI: 10092647
Description:

cardiolipin synthase 1 isoform 1

Referenced in:

Lipid Metabolism

Other entries for this name:
alt prot [202aa] cardiolipin synthase 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.6         47           3
 C cysteine            2.3          7           2
 D aspartate           3.0          9           1
 E glutamate           1.7          5           2
 F phenylalanine       3.0          9           1
 G glycine             7.3         22           2
 H histidine           0.7          2           1
 I isoleucine          6.3         19           2
 K lysine              2.7          8           1
 L leucine            12.6         38           2
 M methionine          1.7          5           1
 N asparagine          3.0          9           1
 P proline             7.6         23           2
 Q glutamine           2.0          6           1
 R arginine            7.0         21           2
 S serine              5.3         16           1
 T threonine           5.6         17           2
 V valine              5.0         15           1
 W tryptophan          2.7          8           1
 Y tyrosine            5.0         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cardiolipin synthase 1 isoform 1 
CRLS1                 0.630   cardiolipin synthase 1 isoform 2 
ITPKC                 0.017   inositol 1,4,5-trisphosphate 3-kinase C 
CDIPT                 0.015   CDP-diacylglycerol-inositol 3-phosphatidyltransferase...
SCAF1                 0.015   SR-related CTD-associated factor 1 
VAX1                  0.014   ventral anterior homeobox 1 isoform a 
ESYT2                 0.014   family with sequence similarity 62 (C2 domain contai...
LOC100291634          0.014   PREDICTED: hypothetical protein XP_002346062 
LOC100291096          0.014   PREDICTED: hypothetical protein XP_002346952 
LOC100287232          0.014   PREDICTED: hypothetical protein XP_002342816 
LOC100287232          0.014   PREDICTED: hypothetical protein 
HECA                  0.014   headcase 
LOC100128572          0.012   PREDICTED: hypothetical protein 
LOC100291220          0.012   PREDICTED: hypothetical protein XP_002347633 
LOC100128572          0.012   PREDICTED: hypothetical protein 
LOC100287224          0.012   PREDICTED: hypothetical protein XP_002343483 
LOC100128572          0.012   PREDICTED: hypothetical protein 
C17orf65              0.012   hypothetical protein LOC339201 
LOC100292958          0.012   PREDICTED: hypothetical protein 
LOC100293661          0.012   PREDICTED: hypothetical protein 
LOC100288311          0.012   PREDICTED: hypothetical protein 
LOC100289810          0.012   PREDICTED: hypothetical protein XP_002346828 
LOC100288311          0.012   PREDICTED: hypothetical protein XP_002342972 
LOC100287329          0.012   PREDICTED: hypothetical protein XP_002342661 
LOC100294294          0.012   PREDICTED: hypothetical protein XP_002344096 
IER5L                 0.012   immediate early response 5-like 
LOC100290265          0.012   PREDICTED: hypothetical protein XP_002346787 
LOC727804             0.012   PREDICTED: hypothetical protein 
TLX1                  0.012   T-cell leukemia homeobox 1 
SMARCD2               0.012   SWI/SNF-related matrix-associated actin-dependent r...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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