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Search of human proteins with 187608750
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|187608750 zinc finger protein 9 isoform 6 [Homo sapiens]
(170 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|187608750 zinc finger protein 9 isoform 6 [Homo sapiens] 386 e-108
gi|187608744 zinc finger protein 9 isoform 5 [Homo sapiens] 382 e-106
gi|187608738 zinc finger protein 9 isoform 4 [Homo sapiens] 381 e-106
gi|4827071 zinc finger protein 9 isoform 3 [Homo sapiens] 379 e-106
gi|187608732 zinc finger protein 9 isoform 2 [Homo sapiens] 375 e-104
gi|187608726 zinc finger protein 9 isoform 1 [Homo sapiens] 374 e-104
gi|42558260 zinc finger, CCHC domain containing 13 [Homo sapiens] 221 2e-58
gi|110815844 zinc finger, CCHC domain containing 7 [Homo sapiens] 63 1e-10
gi|196259805 zinc finger, CCHC domain containing 9 [Homo sapiens] 57 1e-08
gi|196259803 zinc finger, CCHC domain containing 9 [Homo sapiens] 57 1e-08
gi|14150027 zinc finger, CCHC domain containing 9 [Homo sapiens] 57 1e-08
gi|29648305 zinc finger, CCHC domain containing 3 [Homo sapiens] 54 5e-08
gi|57863246 zinc finger, CCHC domain containing 11 isoform b [Ho... 46 1e-05
gi|190610025 zinc finger protein 93 homolog [Homo sapiens] 45 2e-05
gi|147905620 PR domain containing 9 [Homo sapiens] 44 9e-05
gi|57863250 zinc finger, CCHC domain containing 11 isoform c [Ho... 44 9e-05
gi|221139779 zinc finger protein 534 isoform 2 [Homo sapiens] 43 1e-04
gi|221139777 zinc finger protein 534 isoform 1 [Homo sapiens] 43 1e-04
gi|57863248 zinc finger, CCHC domain containing 11 isoform a [Ho... 43 1e-04
gi|239753095 PREDICTED: similar to hCG1725380 [Homo sapiens] 40 0.001
gi|239747658 PREDICTED: similar to hCG1725380 [Homo sapiens] 40 0.001
gi|239741529 PREDICTED: similar to hCG1725380 [Homo sapiens] 40 0.001
gi|51972214 lin-28 homolog B [Homo sapiens] 39 0.002
gi|224177533 zinc finger protein LOC400713 [Homo sapiens] 39 0.002
gi|13375938 lin-28 homolog [Homo sapiens] 39 0.003
gi|58331272 zinc finger, CCHC domain containing 6 [Homo sapiens] 38 0.004
gi|122937213 zinc finger protein 99 [Homo sapiens] 38 0.004
gi|22749145 ring finger protein 217 [Homo sapiens] 38 0.005
gi|169170082 PREDICTED: hypothetical protein LOC728927 [Homo sap... 37 0.008
gi|169170430 PREDICTED: similar to hCG40110 [Homo sapiens] 37 0.008
>gi|187608750 zinc finger protein 9 isoform 6 [Homo sapiens]
Length = 170
Score = 386 bits (992), Expect = e-108
Identities = 170/170 (100%), Positives = 170/170 (100%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Query: 61 DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGH 120
DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGH
Sbjct: 61 DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGH 120
Query: 121 IQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 170
IQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 121 IQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 170
>gi|187608744 zinc finger protein 9 isoform 5 [Homo sapiens]
Length = 171
Score = 382 bits (980), Expect = e-106
Identities = 170/171 (99%), Positives = 170/171 (99%), Gaps = 1/171 (0%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Query: 61 DLQED-ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFG 119
DLQED ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFG
Sbjct: 61 DLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFG 120
Query: 120 HIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 170
HIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 121 HIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 171
>gi|187608738 zinc finger protein 9 isoform 4 [Homo sapiens]
Length = 172
Score = 381 bits (979), Expect = e-106
Identities = 170/172 (98%), Positives = 170/172 (98%), Gaps = 2/172 (1%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Query: 61 DLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEF 118
DLQED ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEF
Sbjct: 61 DLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEF 120
Query: 119 GHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 170
GHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 121 GHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 172
>gi|4827071 zinc finger protein 9 isoform 3 [Homo sapiens]
Length = 177
Score = 379 bits (974), Expect = e-106
Identities = 170/177 (96%), Positives = 170/177 (96%), Gaps = 7/177 (3%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG-------FQFVSSSLPDICYRCGES 53
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG FQFVSSSLPDICYRCGES
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 54 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCY 113
GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCY
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCY 120
Query: 114 SCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 170
SCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 121 SCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 177
>gi|187608732 zinc finger protein 9 isoform 2 [Homo sapiens]
Length = 178
Score = 375 bits (962), Expect = e-104
Identities = 170/178 (95%), Positives = 170/178 (95%), Gaps = 8/178 (4%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG-------FQFVSSSLPDICYRCGES 53
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG FQFVSSSLPDICYRCGES
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 54 GHLAKDCDLQED-ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKC 112
GHLAKDCDLQED ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKC
Sbjct: 61 GHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKC 120
Query: 113 YSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 170
YSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 121 YSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 178
>gi|187608726 zinc finger protein 9 isoform 1 [Homo sapiens]
Length = 179
Score = 374 bits (961), Expect = e-104
Identities = 170/179 (94%), Positives = 170/179 (94%), Gaps = 9/179 (5%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG-------FQFVSSSLPDICYRCGES 53
MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRG FQFVSSSLPDICYRCGES
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 54 GHLAKDCDLQED--ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 111
GHLAKDCDLQED ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK
Sbjct: 61 GHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK 120
Query: 112 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 170
CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
Sbjct: 121 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA 179
>gi|42558260 zinc finger, CCHC domain containing 13 [Homo sapiens]
Length = 166
Score = 221 bits (564), Expect = 2e-58
Identities = 99/145 (68%), Positives = 108/145 (74%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
MSS + F CG SGHWAR CP GG GR GRG Q S++L CY CGESG AK+C
Sbjct: 1 MSSKDFFACGHSGHWARGCPRGGAGGRRGGGHGRGSQCGSTTLSYTCYCCGESGRNAKNC 60
Query: 61 DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGH 120
L + CYNCGR GHIAKDCK+PKRER Q CY CG+ GHLARDCD EQKCYSCG+ GH
Sbjct: 61 VLLGNICYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHLARDCDRQKEQKCYSCGKLGH 120
Query: 121 IQKDCTKVKCYRCGETGHVAINCSK 145
IQKDC +VKCYRCGE GHVAINCSK
Sbjct: 121 IQKDCAQVKCYRCGEIGHVAINCSK 145
Score = 35.0 bits (79), Expect = 0.031
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 113 YSCGEFGHIQKDCTKVKC--YRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 166
++CG GH + C + R G G + S T CY CGESG A+ C +
Sbjct: 7 FACGHSGHWARGCPRGGAGGRRGGGHGRGSQCGSTTLSYTCYCCGESGRNAKNCVL 62
>gi|110815844 zinc finger, CCHC domain containing 7 [Homo sapiens]
Length = 543
Score = 63.2 bits (152), Expect = 1e-10
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 16/145 (11%)
Query: 30 RSRGRGFQ-FVSSSLPDICYRCGESGHLAKDCDLQEDA--CYNCGRGGHIAKDCKEPKRE 86
R+ GR Q + S++ IC C + GHL+K+C L C+ C R GH+ C P
Sbjct: 225 RTPGRWTQRYYSANKNIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAP--- 281
Query: 87 REQCCYNCGKPGHLARDC--DHADEQKCYSCGEFGHIQKDCTKV-----KCYRCGETGHV 139
C C P L C H+ +++C C GH CT++ + G
Sbjct: 282 ---LCEYCPVPKMLDHSCLFRHSWDKQCDRCHMLGHYTDACTEIWRQYHLTTKPGPPKKP 338
Query: 140 AINCSKTSEVNCYRCGESGHLAREC 164
++ CY C + GH EC
Sbjct: 339 KTPSRPSALAYCYHCAQKGHYGHEC 363
Score = 26.9 bits (58), Expect = 8.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 6 CFKCGRSGHWARECP 20
C+ C + GH+ ECP
Sbjct: 350 CYHCAQKGHYGHECP 364
>gi|196259805 zinc finger, CCHC domain containing 9 [Homo sapiens]
Length = 271
Score = 56.6 bits (135), Expect = 1e-08
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 18/98 (18%)
Query: 46 ICYRCGESGHLAKDC-------DLQEDACYNCGRGGHIAKDCK---EPKREREQC--CYN 93
+C+ C + GH DC D+ CY CG H CK +P C+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 94 CGKPGHLARDCD------HADEQKCYSCGEFGHIQKDC 125
CG+ GHL+R C +AD C CG H++KDC
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 54.7 bits (130), Expect = 4e-08
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 23/107 (21%)
Query: 81 KEPKREREQCCYNCGKPGHLARDCDHADEQK------CYSCGEFGH-IQKDCTKV----- 128
++ ++ C++C KPGH DC A E + CY CG H I K KV
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 129 -----KCYRCGETGHVAINCSKTSE------VNCYRCGESGHLAREC 164
KC+ CGE GH++ +C + C CG HL ++C
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 41.2 bits (95), Expect = 4e-04
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 19/89 (21%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
M + C++CG + H +C G F F C+ CGE GHL++ C
Sbjct: 152 MGTGICYRCGSTEHEITKCKAKVDPALGE------FPFAK------CFVCGEMGHLSRSC 199
Query: 61 -----DLQED--ACYNCGRGGHIAKDCKE 82
L D C CG H+ KDC E
Sbjct: 200 PDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
>gi|196259803 zinc finger, CCHC domain containing 9 [Homo sapiens]
Length = 271
Score = 56.6 bits (135), Expect = 1e-08
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 18/98 (18%)
Query: 46 ICYRCGESGHLAKDC-------DLQEDACYNCGRGGHIAKDCK---EPKREREQC--CYN 93
+C+ C + GH DC D+ CY CG H CK +P C+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 94 CGKPGHLARDCD------HADEQKCYSCGEFGHIQKDC 125
CG+ GHL+R C +AD C CG H++KDC
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 54.7 bits (130), Expect = 4e-08
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 23/107 (21%)
Query: 81 KEPKREREQCCYNCGKPGHLARDCDHADEQK------CYSCGEFGH-IQKDCTKV----- 128
++ ++ C++C KPGH DC A E + CY CG H I K KV
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 129 -----KCYRCGETGHVAINCSKTSE------VNCYRCGESGHLAREC 164
KC+ CGE GH++ +C + C CG HL ++C
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 41.2 bits (95), Expect = 4e-04
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 19/89 (21%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
M + C++CG + H +C G F F C+ CGE GHL++ C
Sbjct: 152 MGTGICYRCGSTEHEITKCKAKVDPALGE------FPFAK------CFVCGEMGHLSRSC 199
Query: 61 -----DLQED--ACYNCGRGGHIAKDCKE 82
L D C CG H+ KDC E
Sbjct: 200 PDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
>gi|14150027 zinc finger, CCHC domain containing 9 [Homo sapiens]
Length = 271
Score = 56.6 bits (135), Expect = 1e-08
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 18/98 (18%)
Query: 46 ICYRCGESGHLAKDC-------DLQEDACYNCGRGGHIAKDCK---EPKREREQC--CYN 93
+C+ C + GH DC D+ CY CG H CK +P C+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 94 CGKPGHLARDCD------HADEQKCYSCGEFGHIQKDC 125
CG+ GHL+R C +AD C CG H++KDC
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 54.7 bits (130), Expect = 4e-08
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 23/107 (21%)
Query: 81 KEPKREREQCCYNCGKPGHLARDCDHADEQK------CYSCGEFGH-IQKDCTKV----- 128
++ ++ C++C KPGH DC A E + CY CG H I K KV
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 129 -----KCYRCGETGHVAINCSKTSE------VNCYRCGESGHLAREC 164
KC+ CGE GH++ +C + C CG HL ++C
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 41.2 bits (95), Expect = 4e-04
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 19/89 (21%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
M + C++CG + H +C G F F C+ CGE GHL++ C
Sbjct: 152 MGTGICYRCGSTEHEITKCKAKVDPALGE------FPFAK------CFVCGEMGHLSRSC 199
Query: 61 -----DLQED--ACYNCGRGGHIAKDCKE 82
L D C CG H+ KDC E
Sbjct: 200 PDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
>gi|29648305 zinc finger, CCHC domain containing 3 [Homo sapiens]
Length = 403
Score = 54.3 bits (129), Expect = 5e-08
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 112 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 164
C+ CG H+ CT+ +C+RCGE GH++ C K + C CG+ GH +C
Sbjct: 335 CFKCGSRTHMSGSCTQDRCFRCGEEGHLSPYCRK--GIVCNLCGKRGHAFAQC 385
Score = 51.2 bits (121), Expect = 4e-07
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 91 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTK-VKCYRCGETGHVAINCSKT--S 147
C+ CG H++ C + +C+ CGE GH+ C K + C CG+ GH C K +
Sbjct: 335 CFKCGSRTHMSGSCT---QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHN 391
Query: 148 EVNCYRCGESGH 159
V G +GH
Sbjct: 392 SVAAQLTGVAGH 403
Score = 49.3 bits (116), Expect = 2e-06
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 34 RGFQFVSSSLPDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYN 93
RG+ + P C++CG H++ C +D C+ CG GH++ C+ + C
Sbjct: 323 RGYSWYKGQ-PKTCFKCGSRTHMSGSCT--QDRCFRCGEEGHLSPYCR-----KGIVCNL 374
Query: 94 CGKPGHLARDCDHA 107
CGK GH C A
Sbjct: 375 CGKRGHAFAQCPKA 388
Score = 40.8 bits (94), Expect = 6e-04
Identities = 23/75 (30%), Positives = 28/75 (37%), Gaps = 24/75 (32%)
Query: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
CFKCG H + C D C+RCGE GHL+ C +
Sbjct: 335 CFKCGSRTHMSGSCTQ-----------------------DRCFRCGEEGHLSPYC-RKGI 370
Query: 66 ACYNCGRGGHIAKDC 80
C CG+ GH C
Sbjct: 371 VCNLCGKRGHAFAQC 385
Score = 28.1 bits (61), Expect = 3.8
Identities = 14/59 (23%), Positives = 20/59 (33%), Gaps = 22/59 (37%)
Query: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
+ + CF+CG GH + C G +C CG+ GH C
Sbjct: 349 TQDRCFRCGEEGHLSPYCRKG----------------------IVCNLCGKRGHAFAQC 385
>gi|57863246 zinc finger, CCHC domain containing 11 isoform b [Homo
sapiens]
Length = 1644
Score = 46.2 bits (108), Expect = 1e-05
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 47 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKR--EREQCCYNCGKPG--HLAR 102
C CG+ GH KDC ++ + + KD +E K E E+ + P H R
Sbjct: 1295 CRVCGKIGHYMKDCPKRKSLLFRLKK-----KDSEEEKEGNEEEKDSRDVLDPRDLHDTR 1349
Query: 103 DCDHADEQKCYSCGEFGHIQKDCTKVKCYR 132
D + +C+ CG+ GH++++C +VK R
Sbjct: 1350 DFRDPRDLRCFICGDAGHVRRECPEVKLAR 1379
Score = 38.1 bits (87), Expect = 0.004
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 20/89 (22%)
Query: 88 EQCCYNCGKPGHLARDCDH------------ADEQKCYSCGEFGHIQKDCTKVKCYRCGE 135
++CC CGK GH +DC ++E+K E +KD V R
Sbjct: 1292 DRCCRVCGKIGHYMKDCPKRKSLLFRLKKKDSEEEK-----EGNEEEKDSRDVLDPR--- 1343
Query: 136 TGHVAINCSKTSEVNCYRCGESGHLAREC 164
H + ++ C+ CG++GH+ REC
Sbjct: 1344 DLHDTRDFRDPRDLRCFICGDAGHVRREC 1372
Score = 33.1 bits (74), Expect = 0.12
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 6 CFKCGRSGHWARECPTGGG-----RGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
C CG+ GH+ ++CP + + G + S + R H +D
Sbjct: 1295 CRVCGKIGHYMKDCPKRKSLLFRLKKKDSEEEKEGNEEEKDSRDVLDPR---DLHDTRDF 1351
Query: 61 -DLQEDACYNCGRGGHIAKDCKEPKREREQ 89
D ++ C+ CG GH+ ++C E K R++
Sbjct: 1352 RDPRDLRCFICGDAGHVRRECPEVKLARQR 1381
>gi|190610025 zinc finger protein 93 homolog [Homo sapiens]
Length = 738
Score = 45.4 bits (106), Expect = 2e-05
Identities = 43/185 (23%), Positives = 68/185 (36%), Gaps = 38/185 (20%)
Query: 8 KCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGES--------GHLAKD 59
+ G+ +W EC G + +++ R + P C+ CG+S HL
Sbjct: 313 RTGKKRYWCHECGKGFSQSSNLQTHQR---VHTGEKPYTCHECGKSFNQSSHLYAHLPIH 369
Query: 60 CDLQEDACYNCGRGGHIAKD----CKEPKREREQCCYNCGKPGHLARDCDHADE-----Q 110
+ C +CG+G + D C+ E+ C CGK G R A E +
Sbjct: 370 TGEKPYRCDSCGKGFSRSTDLNIHCRVHTGEKPYKCEVCGK-GFTQRSHLQAHERIHTGE 428
Query: 111 KCYSCGEFG-------------HIQKDCTKVKCYRCGETGHVAINCSKTSEVNC----YR 153
K Y CG+ G + + KC CG+ ++ N V+ Y+
Sbjct: 429 KPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYK 488
Query: 154 CGESG 158
C E G
Sbjct: 489 CEECG 493
>gi|147905620 PR domain containing 9 [Homo sapiens]
Length = 894
Score = 43.5 bits (101), Expect = 9e-05
Identities = 48/182 (26%), Positives = 62/182 (34%), Gaps = 33/182 (18%)
Query: 6 CFKCGRSGHWARECPTG-----GGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
C +CGR W T G + R GRGF + S L GE ++
Sbjct: 666 CRECGRGFSWQSVLLTHQRTHTGEKPYVCRECGRGFSWQSVLLTHQRTHTGEKPYV---- 721
Query: 61 DLQEDACYNCGRG----GHIAKDCKEPKREREQCCYNCGK----PGHLARDCDHADEQKC 112
C CGRG H+ + + E+ C CG+ HL R +K
Sbjct: 722 ------CRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLRHQRTHTGEKP 775
Query: 113 YSCGEFGH----------IQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAR 162
Y C E G Q+ T K Y C E G N S GE ++ R
Sbjct: 776 YVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCR 835
Query: 163 EC 164
EC
Sbjct: 836 EC 837
Score = 34.7 bits (78), Expect = 0.041
Identities = 49/201 (24%), Positives = 62/201 (30%), Gaps = 43/201 (21%)
Query: 6 CFKCGRSGHWARECPTG-----GGRGRGMRSRGRGFQFVSSSL----------PDICYRC 50
C +CGR W G + R GRGF + S L P +C C
Sbjct: 554 CRECGRGFSWKSHLLIHQRIHTGEKPYVCRECGRGFSWQSVLLTHQRTHTGEKPYVCREC 613
Query: 51 GES--------GHLAKDCDLQEDACYNCGRG----GHIAKDCKEPKREREQCCYNCGKPG 98
G H + + C CGRG + + E+ C CG+
Sbjct: 614 GRGFSRQSVLLTHQRRHTGEKPYVCRECGRGFSRQSVLLTHQRRHTGEKPYVCRECGRGF 673
Query: 99 H-----LARDCDHADEQKCYSCGEFGH----------IQKDCTKVKCYRCGETGHVAINC 143
L H E K Y C E G Q+ T K Y C E G N
Sbjct: 674 SWQSVLLTHQRTHTGE-KPYVCRECGRGFSWQSVLLTHQRTHTGEKPYVCRECGRGFSNK 732
Query: 144 SKTSEVNCYRCGESGHLAREC 164
S GE ++ REC
Sbjct: 733 SHLLRHQRTHTGEKPYVCREC 753
>gi|57863250 zinc finger, CCHC domain containing 11 isoform c [Homo
sapiens]
Length = 1640
Score = 43.5 bits (101), Expect = 9e-05
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 15/81 (18%)
Query: 67 CYNCGRGGHIAKDCKEPKR-------------EREQCCYNCGKPG--HLARDCDHADEQK 111
C CG+ GH KDC + KR E E+ + P H RD + +
Sbjct: 1295 CRVCGKIGHYMKDCPKRKRLKKKDSEEEKEGNEEEKDSRDVLDPRDLHDTRDFRDPRDLR 1354
Query: 112 CYSCGEFGHIQKDCTKVKCYR 132
C+ CG+ GH++++C +VK R
Sbjct: 1355 CFICGDAGHVRRECPEVKLAR 1375
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 16/85 (18%)
Query: 88 EQCCYNCGKPGHLARDCDH--------ADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHV 139
++CC CGK GH +DC ++E+K E +KD V R H
Sbjct: 1292 DRCCRVCGKIGHYMKDCPKRKRLKKKDSEEEK-----EGNEEEKDSRDVLDPR---DLHD 1343
Query: 140 AINCSKTSEVNCYRCGESGHLAREC 164
+ ++ C+ CG++GH+ REC
Sbjct: 1344 TRDFRDPRDLRCFICGDAGHVRREC 1368
Score = 33.9 bits (76), Expect = 0.069
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 6 CFKCGRSGHWARECPTGGG-RGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC-DLQ 63
C CG+ GH+ ++CP + + G + S + R H +D D +
Sbjct: 1295 CRVCGKIGHYMKDCPKRKRLKKKDSEEEKEGNEEEKDSRDVLDPR---DLHDTRDFRDPR 1351
Query: 64 EDACYNCGRGGHIAKDCKEPKREREQ 89
+ C+ CG GH+ ++C E K R++
Sbjct: 1352 DLRCFICGDAGHVRRECPEVKLARQR 1377
>gi|221139779 zinc finger protein 534 isoform 2 [Homo sapiens]
Length = 674
Score = 43.1 bits (100), Expect = 1e-04
Identities = 40/147 (27%), Positives = 56/147 (38%), Gaps = 36/147 (24%)
Query: 48 YRCGESG-------HLAKDCDLQED----ACYNCG----RGGHIAKDCKEPKREREQCCY 92
Y+C E G HLA+ D+ +C CG R H+ + E+ C
Sbjct: 507 YKCNECGKVFRQNSHLAQHRDIHTGEKPYSCNECGKVFRRNSHLVRHRNVHTGEKPYSCN 566
Query: 93 NCGKP----GHLARDCDHADEQKCYSCGEFGHI----------QKDCTKVKCYRCGETGH 138
CGK HLAR + +K +SC E G + +K T K Y+C E
Sbjct: 567 ECGKVFSRNSHLARHRNIHTGEKPHSCNECGKVFSRNSHLARHRKIHTGEKLYKCNECSK 626
Query: 139 VAINCSKTSE-------VNCYRCGESG 158
V S+ ++ V Y C E G
Sbjct: 627 VFSRNSRLAQHRNIHTGVKPYSCNECG 653
Score = 37.7 bits (86), Expect = 0.005
Identities = 33/139 (23%), Positives = 56/139 (40%), Gaps = 20/139 (14%)
Query: 44 PDICYRCGE----SGHLAKDCDLQED----ACYNCG----RGGHIAKDCKEPKREREQCC 91
P C CG+ + HL + ++ +C CG R H+A+ E+ C
Sbjct: 534 PYSCNECGKVFRRNSHLVRHRNVHTGEKPYSCNECGKVFSRNSHLARHRNIHTGEKPHSC 593
Query: 92 YNCGKP----GHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTS 147
CGK HLAR +K Y C E + +++ +R TG +C++
Sbjct: 594 NECGKVFSRNSHLARHRKIHTGEKLYKCNECSKVFSRNSRLAQHRNIHTGVKPYSCNECG 653
Query: 148 EVNCYRCGESGHLARECTI 166
+V ++ L + C+I
Sbjct: 654 KV----FSKNSILVQHCSI 668
Score = 37.4 bits (85), Expect = 0.006
Identities = 42/178 (23%), Positives = 57/178 (32%), Gaps = 36/178 (20%)
Query: 23 GGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDL------------------QE 64
GGR G+ F+ S + GE + DC +
Sbjct: 419 GGRRYKCNECGKAFRTCSDLTAHLLIHTGEKPYECIDCGKVFRHKSSLTYHCRIHTGEKP 478
Query: 65 DACYNCGR----GGHIAKDCKEPKREREQCCYNCGKP----GHLARDCDHADEQKCYSCG 116
C CG+ ++ + K E+ C CGK HLA+ D +K YSC
Sbjct: 479 YKCNECGKVFSQNSNLQRHRKIHTGEKLYKCNECGKVFRQNSHLAQHRDIHTGEKPYSCN 538
Query: 117 EFGHI----------QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 164
E G + + T K Y C E G V S + GE H EC
Sbjct: 539 ECGKVFRRNSHLVRHRNVHTGEKPYSCNECGKVFSRNSHLARHRNIHTGEKPHSCNEC 596
Score = 31.6 bits (70), Expect = 0.34
Identities = 34/135 (25%), Positives = 48/135 (35%), Gaps = 26/135 (19%)
Query: 48 YRCGESGHLAKDCD-LQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDH 106
Y+C E G C L + G + K+C + R + H
Sbjct: 311 YKCSECGKAFSVCSSLTAHLVIHTGEKPYDCKECGKVFRHKSSLT---------THQTVH 361
Query: 107 ADEQ--KCYSCGE-FGHI------QKDCTKVKCYRCGETGHVAINCSKTSE-------VN 150
E+ KC CG+ F I +K T K Y+C E G V I S+ +
Sbjct: 362 TGERPYKCNECGKGFSRIAFLARHRKVHTGEKPYKCNECGKVFIGNSRLARHRKIHTGGR 421
Query: 151 CYRCGESGHLARECT 165
Y+C E G R C+
Sbjct: 422 RYKCNECGKAFRTCS 436
Score = 28.5 bits (62), Expect = 2.9
Identities = 37/155 (23%), Positives = 53/155 (34%), Gaps = 28/155 (18%)
Query: 28 GMRSRGRGFQFVSSSLP--------DICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKD 79
G G+ F+ VSSSL D Y+C + G + N H
Sbjct: 200 GCNEHGKVFR-VSSSLTNRQVIHIADKTYKCSDCGEIFSS---------NSNFAQHQRIH 249
Query: 80 CKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI----------QKDCTKVK 129
E + +C + HLA+ QK Y+ E G + +K T K
Sbjct: 250 TGEKPYKYNECGKVFNQNSHLAQHQKIHTGQKPYNNKECGKVFSHHAYLAQHRKIHTGEK 309
Query: 130 CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 164
Y+C E G CS + GE + +EC
Sbjct: 310 PYKCSECGKAFSVCSSLTAHLVIHTGEKPYDCKEC 344
>gi|221139777 zinc finger protein 534 isoform 1 [Homo sapiens]
Length = 661
Score = 43.1 bits (100), Expect = 1e-04
Identities = 40/147 (27%), Positives = 56/147 (38%), Gaps = 36/147 (24%)
Query: 48 YRCGESG-------HLAKDCDLQED----ACYNCG----RGGHIAKDCKEPKREREQCCY 92
Y+C E G HLA+ D+ +C CG R H+ + E+ C
Sbjct: 494 YKCNECGKVFRQNSHLAQHRDIHTGEKPYSCNECGKVFRRNSHLVRHRNVHTGEKPYSCN 553
Query: 93 NCGKP----GHLARDCDHADEQKCYSCGEFGHI----------QKDCTKVKCYRCGETGH 138
CGK HLAR + +K +SC E G + +K T K Y+C E
Sbjct: 554 ECGKVFSRNSHLARHRNIHTGEKPHSCNECGKVFSRNSHLARHRKIHTGEKLYKCNECSK 613
Query: 139 VAINCSKTSE-------VNCYRCGESG 158
V S+ ++ V Y C E G
Sbjct: 614 VFSRNSRLAQHRNIHTGVKPYSCNECG 640
Score = 37.7 bits (86), Expect = 0.005
Identities = 33/139 (23%), Positives = 56/139 (40%), Gaps = 20/139 (14%)
Query: 44 PDICYRCGE----SGHLAKDCDLQED----ACYNCG----RGGHIAKDCKEPKREREQCC 91
P C CG+ + HL + ++ +C CG R H+A+ E+ C
Sbjct: 521 PYSCNECGKVFRRNSHLVRHRNVHTGEKPYSCNECGKVFSRNSHLARHRNIHTGEKPHSC 580
Query: 92 YNCGKP----GHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTS 147
CGK HLAR +K Y C E + +++ +R TG +C++
Sbjct: 581 NECGKVFSRNSHLARHRKIHTGEKLYKCNECSKVFSRNSRLAQHRNIHTGVKPYSCNECG 640
Query: 148 EVNCYRCGESGHLARECTI 166
+V ++ L + C+I
Sbjct: 641 KV----FSKNSILVQHCSI 655
Score = 37.4 bits (85), Expect = 0.006
Identities = 42/178 (23%), Positives = 57/178 (32%), Gaps = 36/178 (20%)
Query: 23 GGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDL------------------QE 64
GGR G+ F+ S + GE + DC +
Sbjct: 406 GGRRYKCNECGKAFRTCSDLTAHLLIHTGEKPYECIDCGKVFRHKSSLTYHCRIHTGEKP 465
Query: 65 DACYNCGR----GGHIAKDCKEPKREREQCCYNCGKP----GHLARDCDHADEQKCYSCG 116
C CG+ ++ + K E+ C CGK HLA+ D +K YSC
Sbjct: 466 YKCNECGKVFSQNSNLQRHRKIHTGEKLYKCNECGKVFRQNSHLAQHRDIHTGEKPYSCN 525
Query: 117 EFGHI----------QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 164
E G + + T K Y C E G V S + GE H EC
Sbjct: 526 ECGKVFRRNSHLVRHRNVHTGEKPYSCNECGKVFSRNSHLARHRNIHTGEKPHSCNEC 583
Score = 31.6 bits (70), Expect = 0.34
Identities = 34/135 (25%), Positives = 48/135 (35%), Gaps = 26/135 (19%)
Query: 48 YRCGESGHLAKDCD-LQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDH 106
Y+C E G C L + G + K+C + R + H
Sbjct: 298 YKCSECGKAFSVCSSLTAHLVIHTGEKPYDCKECGKVFRHKSSLT---------THQTVH 348
Query: 107 ADEQ--KCYSCGE-FGHI------QKDCTKVKCYRCGETGHVAINCSKTSE-------VN 150
E+ KC CG+ F I +K T K Y+C E G V I S+ +
Sbjct: 349 TGERPYKCNECGKGFSRIAFLARHRKVHTGEKPYKCNECGKVFIGNSRLARHRKIHTGGR 408
Query: 151 CYRCGESGHLARECT 165
Y+C E G R C+
Sbjct: 409 RYKCNECGKAFRTCS 423
Score = 28.5 bits (62), Expect = 2.9
Identities = 37/155 (23%), Positives = 53/155 (34%), Gaps = 28/155 (18%)
Query: 28 GMRSRGRGFQFVSSSLP--------DICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKD 79
G G+ F+ VSSSL D Y+C + G + N H
Sbjct: 187 GCNEHGKVFR-VSSSLTNRQVIHIADKTYKCSDCGEIFSS---------NSNFAQHQRIH 236
Query: 80 CKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI----------QKDCTKVK 129
E + +C + HLA+ QK Y+ E G + +K T K
Sbjct: 237 TGEKPYKYNECGKVFNQNSHLAQHQKIHTGQKPYNNKECGKVFSHHAYLAQHRKIHTGEK 296
Query: 130 CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 164
Y+C E G CS + GE + +EC
Sbjct: 297 PYKCSECGKAFSVCSSLTAHLVIHTGEKPYDCKEC 331
>gi|57863248 zinc finger, CCHC domain containing 11 isoform a [Homo
sapiens]
Length = 1645
Score = 42.7 bits (99), Expect = 1e-04
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 47 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPK--REREQCCYNCGKPG--HLAR 102
C CG+ GH KDC ++ + + KD +E K E E+ + P H R
Sbjct: 1295 CRVCGKIGHYMKDCPKRKSSLLFRLK----KKDSEEEKEGNEEEKDSRDVLDPRDLHDTR 1350
Query: 103 DCDHADEQKCYSCGEFGHIQKDCTKVKCYR 132
D + +C+ CG+ GH++++C +VK R
Sbjct: 1351 DFRDPRDLRCFICGDAGHVRRECPEVKLAR 1380
Score = 37.7 bits (86), Expect = 0.005
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Query: 88 EQCCYNCGKPGHLARDCDHADEQKCYSCG--------EFGHIQKDCTKVKCYRCGETGHV 139
++CC CGK GH +DC + E +KD V R H
Sbjct: 1292 DRCCRVCGKIGHYMKDCPKRKSSLLFRLKKKDSEEEKEGNEEEKDSRDVLDPR---DLHD 1348
Query: 140 AINCSKTSEVNCYRCGESGHLAREC 164
+ ++ C+ CG++GH+ REC
Sbjct: 1349 TRDFRDPRDLRCFICGDAGHVRREC 1373
Score = 32.7 bits (73), Expect = 0.15
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 6 CFKCGRSGHWARECPTGGG------RGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKD 59
C CG+ GH+ ++CP + + G + S + R H +D
Sbjct: 1295 CRVCGKIGHYMKDCPKRKSSLLFRLKKKDSEEEKEGNEEEKDSRDVLDPR---DLHDTRD 1351
Query: 60 C-DLQEDACYNCGRGGHIAKDCKEPKREREQ 89
D ++ C+ CG GH+ ++C E K R++
Sbjct: 1352 FRDPRDLRCFICGDAGHVRRECPEVKLARQR 1382
>gi|239753095 PREDICTED: similar to hCG1725380 [Homo sapiens]
Length = 583
Score = 39.7 bits (91), Expect = 0.001
Identities = 41/173 (23%), Positives = 59/173 (34%), Gaps = 32/173 (18%)
Query: 5 ECFKCGR-----SGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKD 59
+C +CG+ S H + G + G+ F + S GE + +
Sbjct: 421 KCEECGKAFNHSSNHAKHKKIHTGQKPHKCEECGKAFNWFSYLTLHKRIHTGEKPYKCDE 480
Query: 60 CDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFG 119
C + C N + K + E+ C CGK + C H E K GE
Sbjct: 481 CGKAFNQCSN------LTKHKRIHTGEKPYKCEECGKAFNR---CSHLTEHKRIHTGE-- 529
Query: 120 HIQKDCTKVKCYRCGETGHVAINCSKTS-------EVNCYRCGESGHLARECT 165
K Y+C E G V I+CS S CY+ E G C+
Sbjct: 530 ---------KPYKCEECGKVFISCSSLSNHKRIHTREKCYKSEECGKTFNHCS 573
Score = 34.7 bits (78), Expect = 0.041
Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%)
Query: 67 CYNCGRGGHIAKDCKEPKR----EREQCCYNCGKP-GHLARDCDHA---DEQKCYSCGEF 118
C C +I+ +R E+ C CGK H + +H +E+K Y C E
Sbjct: 338 CKECDNSFYISSVLTPLQRIHTAEKSYKCKQCGKAFRHCSCFLEHETIHNEEKHYKCKEC 397
Query: 119 GHIQKDCTKV----------KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 164
G + K T + K Y+C E G + S ++ G+ H EC
Sbjct: 398 GKVFKSFTSLSNHIIIHTGEKLYKCEECGKAFNHSSNHAKHKKIHTGQKPHKCEEC 453
>gi|239747658 PREDICTED: similar to hCG1725380 [Homo sapiens]
Length = 583
Score = 39.7 bits (91), Expect = 0.001
Identities = 41/173 (23%), Positives = 59/173 (34%), Gaps = 32/173 (18%)
Query: 5 ECFKCGR-----SGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKD 59
+C +CG+ S H + G + G+ F + S GE + +
Sbjct: 421 KCEECGKAFNHSSNHAKHKKIHTGQKPHKCEECGKAFNWFSYLTLHKRIHTGEKPYKCDE 480
Query: 60 CDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFG 119
C + C N + K + E+ C CGK + C H E K GE
Sbjct: 481 CGKAFNQCSN------LTKHKRIHTGEKPYKCEECGKAFNR---CSHLTEHKRIHTGE-- 529
Query: 120 HIQKDCTKVKCYRCGETGHVAINCSKTS-------EVNCYRCGESGHLARECT 165
K Y+C E G V I+CS S CY+ E G C+
Sbjct: 530 ---------KPYKCEECGKVFISCSSLSNHKRIHTREKCYKSEECGKTFNHCS 573
Score = 34.7 bits (78), Expect = 0.041
Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%)
Query: 67 CYNCGRGGHIAKDCKEPKR----EREQCCYNCGKP-GHLARDCDHA---DEQKCYSCGEF 118
C C +I+ +R E+ C CGK H + +H +E+K Y C E
Sbjct: 338 CKECDNSFYISSVLTPLQRIHTAEKSYKCKQCGKAFRHCSCFLEHETIHNEEKHYKCKEC 397
Query: 119 GHIQKDCTKV----------KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 164
G + K T + K Y+C E G + S ++ G+ H EC
Sbjct: 398 GKVFKSFTSLSNHIIIHTGKKLYKCEECGKAFNHSSNHAKHKKIHTGQKPHKCEEC 453
>gi|239741529 PREDICTED: similar to hCG1725380 [Homo sapiens]
Length = 583
Score = 39.7 bits (91), Expect = 0.001
Identities = 41/173 (23%), Positives = 59/173 (34%), Gaps = 32/173 (18%)
Query: 5 ECFKCGR-----SGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKD 59
+C +CG+ S H + G + G+ F + S GE + +
Sbjct: 421 KCEECGKAFNHSSNHAKHKKIHTGQKPHKCEECGKAFNWFSYLTLHKRIHTGEKPYKCDE 480
Query: 60 CDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFG 119
C + C N + K + E+ C CGK + C H E K GE
Sbjct: 481 CGKAFNQCSN------LTKHKRIHTGEKPYKCEECGKAFNR---CSHLTEHKRIHTGE-- 529
Query: 120 HIQKDCTKVKCYRCGETGHVAINCSKTS-------EVNCYRCGESGHLARECT 165
K Y+C E G V I+CS S CY+ E G C+
Sbjct: 530 ---------KPYKCEECGKVFISCSSLSNHKRIHTREKCYKSEECGKTFNHCS 573
Score = 34.7 bits (78), Expect = 0.041
Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%)
Query: 67 CYNCGRGGHIAKDCKEPKR----EREQCCYNCGKP-GHLARDCDHA---DEQKCYSCGEF 118
C C +I+ +R E+ C CGK H + +H +E+K Y C E
Sbjct: 338 CKECDNSFYISSVLTPLQRIHTAEKSYKCKQCGKAFRHCSCFLEHETIHNEEKHYKCKEC 397
Query: 119 GHIQKDCTKV----------KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 164
G + K T + K Y+C E G + S ++ G+ H EC
Sbjct: 398 GKVFKSFTSLSNHIIIHTGKKLYKCEECGKAFNHSSNHAKHKKIHTGQKPHKCEEC 453
>gi|51972214 lin-28 homolog B [Homo sapiens]
Length = 250
Score = 38.9 bits (89), Expect = 0.002
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 65 DACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDH 106
D CYNCG H AK+C P + ++ C+ C H+ +C H
Sbjct: 127 DRCYNCGGLDHHAKECSLPPQPKK--CHYCQSIMHMVANCPH 166
Score = 35.0 bits (79), Expect = 0.031
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 81 KEPKREREQCCYNCGKPGHLARDCDHADE-QKCYSCGEFGHIQKDC 125
++PK +R CYNCG H A++C + +KC+ C H+ +C
Sbjct: 122 RKPKGDR---CYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 164
Score = 34.3 bits (77), Expect = 0.053
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 11/72 (15%)
Query: 45 DICYRCGESGHLAKDCDL--QEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLAR 102
D CY CG H AK+C L Q C+ C H+ +C N +P ++
Sbjct: 127 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHK---------NVAQPPASSQ 177
Query: 103 DCDHADEQKCYS 114
A+ Q C S
Sbjct: 178 GRQEAESQPCTS 189
Score = 33.1 bits (74), Expect = 0.12
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Query: 111 KCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 143
+CY+CG H K+C+ KC+ C H+ NC
Sbjct: 128 RCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 164
Score = 28.1 bits (61), Expect = 3.8
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 129 KCYRCGETGHVAINCSKTSE-VNCYRCGESGHLAREC 164
+CY CG H A CS + C+ C H+ C
Sbjct: 128 RCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 164
>gi|224177533 zinc finger protein LOC400713 [Homo sapiens]
Length = 577
Score = 38.9 bits (89), Expect = 0.002
Identities = 38/155 (24%), Positives = 55/155 (35%), Gaps = 33/155 (21%)
Query: 44 PDICYRCG----ESGHLAKDCDLQEDA----CYNCG----RGGHIAKDCKEPKREREQCC 91
P C+ CG ++ HLA + C CG R H+A+ K E+ C
Sbjct: 267 PYKCHECGKVFTQNSHLANHHRIHTGEKPYKCNECGKVFNRNAHLARHQKIHSGEKPYKC 326
Query: 92 YNCGKP-----GHLARDCDHADEQ--KCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCS 144
CGK G A H E+ KC CG+ + T+ + GE + C
Sbjct: 327 KECGKAFSGGSGLTAHLVIHTGEKLYKCNKCGKVFNRNAHLTRHQRIHTGEKPYECKECG 386
Query: 145 KT--------------SEVNCYRCGESGHLARECT 165
K + Y+C E G R+C+
Sbjct: 387 KVFRHKFCLTNHHRMHTGEQPYKCNECGKAFRDCS 421
Score = 36.6 bits (83), Expect = 0.011
Identities = 42/167 (25%), Positives = 61/167 (36%), Gaps = 22/167 (13%)
Query: 4 NECFKC-GRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDL 62
NEC K R+ H AR G + + + G F S G + HL
Sbjct: 299 NECGKVFNRNAHLARHQKIHSGE-KPYKCKECGKAFSGGS--------GLTAHLVIHTGE 349
Query: 63 QEDACYNCG----RGGHIAKDCKEPKREREQCCYNCGKPGHLARDC------DHADEQKC 112
+ C CG R H+ + + E+ C CGK + C H EQ
Sbjct: 350 KLYKCNKCGKVFNRNAHLTRHQRIHTGEKPYECKECGKVFR-HKFCLTNHHRMHTGEQP- 407
Query: 113 YSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGH 159
Y C E G +DC+ + + TG C + ++V +R S H
Sbjct: 408 YKCNECGKAFRDCSGLTAHLLIHTGEKPYKCKECAKVFRHRLSLSNH 454
Score = 35.0 bits (79), Expect = 0.031
Identities = 37/146 (25%), Positives = 51/146 (34%), Gaps = 29/146 (19%)
Query: 48 YRCGESG-------HLAKDCDLQEDA----CYNCGR----GGHIAKDCKEPKREREQCCY 92
Y+C E G HLA+ + C CG+ G + E+ C
Sbjct: 296 YKCNECGKVFNRNAHLARHQKIHSGEKPYKCKECGKAFSGGSGLTAHLVIHTGEKLYKCN 355
Query: 93 NCGKP----GHLARDCDHADEQKCYSCGEFGHI--QKDC--------TKVKCYRCGETGH 138
CGK HL R +K Y C E G + K C T + Y+C E G
Sbjct: 356 KCGKVFNRNAHLTRHQRIHTGEKPYECKECGKVFRHKFCLTNHHRMHTGEQPYKCNECGK 415
Query: 139 VAINCSKTSEVNCYRCGESGHLAREC 164
+CS + GE + +EC
Sbjct: 416 AFRDCSGLTAHLLIHTGEKPYKCKEC 441
Score = 28.9 bits (63), Expect = 2.2
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 18/89 (20%)
Query: 67 CYNCG----RGGHIAKDCKEPKREREQCCYNCGKP----GHLARDCDHADEQKCYSCGEF 118
C CG R ++A + E+ C C K HLAR +K Y C E
Sbjct: 466 CDECGKDFTRNSNLANHHRIHTGEKPYKCSECHKVFSHNSHLARHRQIHTGEKSYKCNEC 525
Query: 119 GHI----------QKDCTKVKCYRCGETG 137
G + ++ T K YRC E G
Sbjct: 526 GKVFSHKLYLKKHERIHTGEKPYRCHECG 554
Score = 27.3 bits (59), Expect = 6.5
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 111 KCYSCGE-FGHI------QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARE 163
KC+ CG+ F I Q+ T K Y+C E G V S + + GE + E
Sbjct: 241 KCHECGKLFNRISLLARHQRIHTGEKPYKCHECGKVFTQNSHLANHHRIHTGEKPYKCNE 300
Query: 164 C 164
C
Sbjct: 301 C 301
>gi|13375938 lin-28 homolog [Homo sapiens]
Length = 209
Score = 38.5 bits (88), Expect = 0.003
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 65 DACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 104
D CYNCG H AK+CK P + ++ C+ C H+ C
Sbjct: 137 DRCYNCGGLDHHAKECKLPPQPKK--CHFCQSISHMVASC 174
Score = 35.0 bits (79), Expect = 0.031
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 82 EPKREREQCCYNCGKPGHLARDCDHADE-QKCYSCGEFGHIQKDC 125
+ +R + CYNCG H A++C + +KC+ C H+ C
Sbjct: 130 QKRRSKGDRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
Score = 34.7 bits (78), Expect = 0.041
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 26 GRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDL--QEDACYNCGRGGHIAKDC 80
G R +G+ Q S D CY CG H AK+C L Q C+ C H+ C
Sbjct: 119 GSERRPKGKSMQ-KRRSKGDRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
Score = 29.6 bits (65), Expect = 1.3
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 129 KCYRCGETGHVAINCSKTSE-VNCYRCGESGHLARECTIEA 168
+CY CG H A C + C+ C H+ C ++A
Sbjct: 138 RCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASCPLKA 178
>gi|58331272 zinc finger, CCHC domain containing 6 [Homo sapiens]
Length = 1495
Score = 38.1 bits (87), Expect = 0.004
Identities = 38/125 (30%), Positives = 47/125 (37%), Gaps = 43/125 (34%)
Query: 47 CYRCGESGHLAKDCDL---------QEDACYNCGRGGHIAKDCKEPKR------ERE--- 88
C CG+ GH KDC + QEDA N + K KE K ERE
Sbjct: 1347 CRICGKIGHFMKDCPMRRKVRRRRDQEDAL-NQRYPENKEKRSKEDKEIHNKYTEREVST 1405
Query: 89 ------QCCYNCGKPGHLARDC----------------DHAD--EQKCYSCGEFGHIQKD 124
QC KP A D D D E++C+ CG GHI+K+
Sbjct: 1406 KEDKPIQCTPQKAKPMRAAADLGREKILRPPVEKWKRQDDKDLREKRCFICGREGHIKKE 1465
Query: 125 CTKVK 129
C + K
Sbjct: 1466 CPQFK 1470
Score = 31.6 bits (70), Expect = 0.34
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSR 32
+ CF CGR GH +ECP G + S+
Sbjct: 1448 LREKRCFICGREGHIKKECPQFKGSSGSLSSK 1479
Score = 29.3 bits (64), Expect = 1.7
Identities = 30/120 (25%), Positives = 45/120 (37%), Gaps = 22/120 (18%)
Query: 67 CYNCGRGGHIAKDC---KEPKREREQ-------CCYNCGKPGHLARDCDHADEQKCYSCG 116
C CG+ GH KDC ++ +R R+Q N K ++ + ++ S
Sbjct: 1347 CRICGKIGHFMKDCPMRRKVRRRRDQEDALNQRYPENKEKRSKEDKEIHNKYTEREVSTK 1406
Query: 117 EFGHIQKDCTKVKCYRCG-ETGHVAI-----------NCSKTSEVNCYRCGESGHLAREC 164
E IQ K K R + G I + E C+ CG GH+ +EC
Sbjct: 1407 EDKPIQCTPQKAKPMRAAADLGREKILRPPVEKWKRQDDKDLREKRCFICGREGHIKKEC 1466
Score = 28.9 bits (63), Expect = 2.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 88 EQCCYNCGKPGHLARDC 104
++CC CGK GH +DC
Sbjct: 1344 DRCCRICGKIGHFMKDC 1360
>gi|122937213 zinc finger protein 99 [Homo sapiens]
Length = 1036
Score = 38.1 bits (87), Expect = 0.004
Identities = 36/160 (22%), Positives = 56/160 (35%), Gaps = 28/160 (17%)
Query: 33 GRGFQFVSSSLPDICYRCGESGHLAKDCDLQEDA----------CYNCGRGGHIAKDCKE 82
G+ F S+ GE + ++C L++ C CG+ + + ++
Sbjct: 704 GKAFNNSSTLRKHEIIHTGEKSYKCEECALRKHEIIHTGKKPYKCEECGKAFNNSSTLRK 763
Query: 83 PK----REREQCCYNCGKP----GHLARDCDHADEQKCYSCGEFGHIQKDC--------- 125
K ++ C CGK HL R +K Y CGE G +
Sbjct: 764 HKIIYTGKKPYKCEECGKAFKQSSHLTRHKAVHTGEKPYKCGECGKAFNNSSTLKKHKLI 823
Query: 126 -TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 164
T+ K Y+C E G N S + GE + EC
Sbjct: 824 HTREKSYKCEECGKAFSNFSALRKHKIIHTGEKPYKCEEC 863
Score = 34.3 bits (77), Expect = 0.053
Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 13/113 (11%)
Query: 67 CYNCGRGGHIAKDCKEPK----REREQCCYNCGKP----GHLARDCDHADEQKCYSCGEF 118
C CG+G + + K E+ C CGK HL + +K Y C E
Sbjct: 890 CEECGKGFNNFSTLMKHKIIHTGEKPYKCEECGKAFKQSSHLTKHKSIHTGEKPYKCEER 949
Query: 119 GHIQKDCTKVKCYRCGETGHVAINCSKTSE-VNCYRCG----ESGHLARECTI 166
G +++ +R TG C + + C CG +S HL + TI
Sbjct: 950 GKAFSHFSRLTKHRIIHTGKKPYKCEECEKPYKCEECGKAFNQSSHLTQHKTI 1002
Score = 29.6 bits (65), Expect = 1.3
Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 18/116 (15%)
Query: 67 CYNCGRGGHIAKDCKEPK----REREQCCYNCGKP----GHLARD-CDHADEQ--KCYSC 115
C CG+ + + + K ++ C CGK HL R H E+ KC C
Sbjct: 448 CEECGKAFNNSSTLMKHKIIHTGKKPYKCEECGKAFKQSSHLTRHKAIHTGEKPYKCEEC 507
Query: 116 GE-FGHI------QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 164
G+ F H Q T K Y+C E G S + GE + EC
Sbjct: 508 GKAFNHFSALRKHQIIHTGKKPYKCEECGKAFSQSSTLRKHEIIHTGEKPYKCEEC 563
Score = 29.3 bits (64), Expect = 1.7
Identities = 29/116 (25%), Positives = 41/116 (35%), Gaps = 18/116 (15%)
Query: 67 CYNCGRGGHIAKDCKEPK----REREQCCYNCGKP----GHLARDCDHADEQKCYSCGE- 117
C CG+ + ++ + E+ C CGK HL R E+K Y C E
Sbjct: 532 CEECGKAFSQSSTLRKHEIIHTGEKPYKCEECGKAFKWSSHLTRHKVIHTEEKPYKCEEC 591
Query: 118 ------FGHIQKD---CTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 164
F ++K T K Y+C E G S + GE + EC
Sbjct: 592 GKAFNHFSALRKHKIIHTGKKPYKCEECGKAFSQSSTLRKHEIIHTGEKPYKCEEC 647
Score = 28.1 bits (61), Expect = 3.8
Identities = 28/118 (23%), Positives = 43/118 (36%), Gaps = 18/118 (15%)
Query: 67 CYNCGRGGHIAKDCKEPK----REREQCCYNCGKPGHLARDCD-----HADEQ--KCYSC 115
C CG+ + ++ + E+ C CGK + H E+ KC C
Sbjct: 616 CEECGKAFSQSSTLRKHEIIHTGEKPYKCEECGKAFKWSSKLTVHKVIHTAEKPCKCEEC 675
Query: 116 GE----FGHIQKDC---TKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 166
G+ F ++K T K Y+C E G N S + GE + EC +
Sbjct: 676 GKAFKHFSALRKHKIIHTGKKPYKCEECGKAFNNSSTLRKHEIIHTGEKSYKCEECAL 733
Score = 27.7 bits (60), Expect = 5.0
Identities = 41/193 (21%), Positives = 64/193 (33%), Gaps = 33/193 (17%)
Query: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFV-SSSLPDICYRCG----ESGH 55
+ +E G+ + EC G+ S R + + + P C CG +S H
Sbjct: 733 LRKHEIIHTGKKPYKCEEC----GKAFNNSSTLRKHKIIYTGKKPYKCEECGKAFKQSSH 788
Query: 56 LAKDCDLQEDA----CYNCGRGGHIAKDCKEPK----REREQCCYNCGKP---------- 97
L + + C CG+ + + K+ K RE+ C CGK
Sbjct: 789 LTRHKAVHTGEKPYKCGECGKAFNNSSTLKKHKLIHTREKSYKCEECGKAFSNFSALRKH 848
Query: 98 -----GHLARDCDHADEQKCYSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSKTSEVNC 151
G C+ + K ++ K T K Y+C E G N S +
Sbjct: 849 KIIHTGEKPYKCEECECGKAFNNSSTLMKHKIIHTGEKPYKCEECGKGFNNFSTLMKHKI 908
Query: 152 YRCGESGHLAREC 164
GE + EC
Sbjct: 909 IHTGEKPYKCEEC 921
>gi|22749145 ring finger protein 217 [Homo sapiens]
Length = 275
Score = 37.7 bits (86), Expect = 0.005
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 13/96 (13%)
Query: 74 GHIAKDCKEPKREREQC-------CYNCGKPGHLARDCDH---ADEQKCYSCGEFGHIQK 123
GHI + + + QC C+ C P H +C D+ + E H Q+
Sbjct: 67 GHIPTPSRSESKYKIQCPTCQFVWCFKCHSPWHEGVNCKEYKKGDKLLRHWASEIEHGQR 126
Query: 124 D---CTKVKCYRCGETGHVAINCSKTSEVNCYRCGE 156
+ C K K + G + CS+ + CYRCGE
Sbjct: 127 NAQKCPKCKIHIQRTEGCDHMTCSQCNTNFCYRCGE 162
>gi|169170082 PREDICTED: hypothetical protein LOC728927 [Homo
sapiens]
Length = 427
Score = 37.0 bits (84), Expect = 0.008
Identities = 42/145 (28%), Positives = 54/145 (37%), Gaps = 35/145 (24%)
Query: 33 GRGFQFVS--SSLPDI-----CYRCGESGHLAKDCDLQED-----------ACYNCGRGG 74
GRGFQ S + DI C++C E G KDC L D CY C G
Sbjct: 151 GRGFQLCSIFTEHKDIFSREKCHKCEECG---KDCRLFSDFTRHKKIHTVERCYKCEECG 207
Query: 75 HIAK---DCKEPKR----EREQCCYNCGKPGHLARDC-----DHADEQ--KCYSCGEFGH 120
K + E KR E+ C CGK + +H ++ KC CG+
Sbjct: 208 KAFKKFSNLTEHKRVHTGEKPYKCEGCGKTFTCSSTLVKHKRNHTGDRPYKCEECGKAFK 267
Query: 121 IQKDCTKVKCYRCGETGHVAINCSK 145
D T K GE + C+K
Sbjct: 268 CFSDLTNHKRIHTGEKPYKCEECNK 292
Score = 35.8 bits (81), Expect = 0.018
Identities = 32/121 (26%), Positives = 44/121 (36%), Gaps = 24/121 (19%)
Query: 48 YRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKR--EREQC--CYNCGKPGHLARD 103
++C + H +K C C CGRG + E K RE+C C CGK
Sbjct: 134 HQCLSATH-SKTCQ-----CNKCGRGFQLCSIFTEHKDIFSREKCHKCEECGKD------ 181
Query: 104 CDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARE 163
C +F +K T +CY+C E G S +E GE +
Sbjct: 182 --------CRLFSDFTRHKKIHTVERCYKCEECGKAFKKFSNLTEHKRVHTGEKPYKCEG 233
Query: 164 C 164
C
Sbjct: 234 C 234
>gi|169170430 PREDICTED: similar to hCG40110 [Homo sapiens]
Length = 427
Score = 37.0 bits (84), Expect = 0.008
Identities = 42/145 (28%), Positives = 54/145 (37%), Gaps = 35/145 (24%)
Query: 33 GRGFQFVS--SSLPDI-----CYRCGESGHLAKDCDLQED-----------ACYNCGRGG 74
GRGFQ S + DI C++C E G KDC L D CY C G
Sbjct: 151 GRGFQLCSIFTEHKDIFSREKCHKCEECG---KDCRLFSDFTRHKKIHTVERCYKCEECG 207
Query: 75 HIAK---DCKEPKR----EREQCCYNCGKPGHLARDC-----DHADEQ--KCYSCGEFGH 120
K + E KR E+ C CGK + +H ++ KC CG+
Sbjct: 208 KAFKKFSNLTEHKRVHTGEKPYKCEGCGKTFTCSSTLVKHKRNHTGDRPYKCEECGKAFK 267
Query: 121 IQKDCTKVKCYRCGETGHVAINCSK 145
D T K GE + C+K
Sbjct: 268 CFSDLTNHKRIHTGEKPYKCEECNK 292
Score = 35.8 bits (81), Expect = 0.018
Identities = 32/121 (26%), Positives = 44/121 (36%), Gaps = 24/121 (19%)
Query: 48 YRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKR--EREQC--CYNCGKPGHLARD 103
++C + H +K C C CGRG + E K RE+C C CGK
Sbjct: 134 HQCLSATH-SKTCQ-----CNKCGRGFQLCSIFTEHKDIFSREKCHKCEECGKD------ 181
Query: 104 CDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARE 163
C +F +K T +CY+C E G S +E GE +
Sbjct: 182 --------CRLFSDFTRHKKIHTVERCYKCEECGKAFKKFSNLTEHKRVHTGEKPYKCEG 233
Query: 164 C 164
C
Sbjct: 234 C 234
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.483
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,589,779
Number of Sequences: 37866
Number of extensions: 482282
Number of successful extensions: 4537
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 467
Number of HSP's that attempted gapping in prelim test: 2041
Number of HSP's gapped (non-prelim): 2041
length of query: 170
length of database: 18,247,518
effective HSP length: 95
effective length of query: 75
effective length of database: 14,650,248
effective search space: 1098768600
effective search space used: 1098768600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.