Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MAPRE2 Sequence: fasta or formatted (327aa) NCBI GI: 10346135
Description:

microtubule-associated protein, RP/EB family, member 2 isoform 1

Referenced in:

Cytoskeleton

Other entries for this name:
alt prot [284aa] microtubule-associated protein, RP/EB family, member 2 isoform 2
alt prot [315aa] microtubule-associated protein, RP/EB family, member 2 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         22           2
 C cysteine            1.2          4           1
 D aspartate           5.8         19           2
 E glutamate           9.2         30           2
 F phenylalanine       4.0         13           1
 G glycine             5.5         18           1
 H histidine           3.4         11           2
 I isoleucine          5.2         17           2
 K lysine              7.3         24           2
 L leucine             6.7         22           2
 M methionine          2.1          7           1
 N asparagine          5.2         17           3
 P proline             6.1         20           3
 Q glutamine           7.0         23           2
 R arginine            3.7         12           1
 S serine              8.0         26           3
 T threonine           3.7         12           1
 V valine              4.9         16           1
 W tryptophan          0.9          3           1
 Y tyrosine            3.4         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   microtubule-associated protein, RP/EB family, member... 
MAPRE2                0.870   microtubule-associated protein, RP/EB family, membe...
MAPRE2                0.857   microtubule-associated protein, RP/EB family, membe...
MAPRE3                0.495   microtubule-associated protein, RP/EB family, member...
MAPRE1                0.442   microtubule-associated protein, RP/EB family, member ...
RAI14                 0.026   retinoic acid induced 14 isoform d 
RAI14                 0.026   retinoic acid induced 14 isoform c 
RAI14                 0.026   retinoic acid induced 14 isoform b 
RAI14                 0.026   retinoic acid induced 14 isoform a 
RAI14                 0.026   retinoic acid induced 14 isoform a 
RAI14                 0.026   retinoic acid induced 14 isoform a 
LOC440563             0.020   heterogeneous nuclear ribonucleoprotein C-like [Hom...
HNRNPCL1              0.019   heterogeneous nuclear ribonucleoprotein C-like 1 [Ho...
SFRS2IP               0.019   splicing factor, arginine/serine-rich 2, interactin...
PPFIBP1               0.019   PTPRF interacting protein binding protein 1 isoform ...
CASKIN1               0.017   CASK interacting protein 1 
GOLGB1                0.017   golgi autoantigen, golgin subfamily b, macrogolgin ...
BAHCC1                0.017   BAH domain and coiled-coil containing 1 
SPATS2L               0.016   SPATS2-like protein isoform b 
BSN                   0.016   bassoon protein 
BRD4                  0.016   bromodomain-containing protein 4 isoform long 
CKAP5                 0.016   colonic and hepatic tumor over-expressed protein iso...
CKAP5                 0.016   colonic and hepatic tumor over-expressed protein iso...
PFTK1                 0.016   PFTAIRE protein kinase 1 
TBC1D2                0.016   TBC1 domain family, member 2 
PPFIBP2               0.016   PTPRF interacting protein, binding protein 2 (lipri...
CLASP1                0.016   CLIP-associating protein 1 isoform 3 
CLASP1                0.016   CLIP-associating protein 1 isoform 2 
LOC100133142          0.014   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100133142          0.014   PREDICTED: similar to zinc finger protein 208 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press